RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 LYRM2Q9NU23 88 aaPredicted RBP8.68□□□□□ -1.02
CDK5RAP3-204ENST00000577664 DMRT1Q9Y5R6 373 aa8.68□□□□□ -1.02
CDK5RAP3-204ENST00000577664 PSMB11A5LHX3 300 aa8.67□□□□□ -1.02
CDK5RAP3-204ENST00000577664 C15orf62A8K5M9 175 aa8.67□□□□□ -1.02
CDK5RAP3-204ENST00000577664 HMSDA8MTL9 139 aa8.67□□□□□ -1.02
CDK5RAP3-204ENST00000577664 PRSS46E5RG02 174 aa8.67□□□□□ -1.02
CDK5RAP3-204ENST00000577664 CYB5BO43169 146 aa8.67□□□□□ -1.02
CDK5RAP3-204ENST00000577664 HOXA1P49639 335 aaPredicted RBP8.67□□□□□ -1.02
CDK5RAP3-204ENST00000577664 MFAP2P55001 183 aa8.67□□□□□ -1.02
CDK5RAP3-204ENST00000577664 RPL23AP62750 156 aaKnown RBP8.67□□□□□ -1.02
CDK5RAP3-204ENST00000577664 KIAA0141Q14154 515 aaPredicted RBP8.67□□□□□ -1.02
CDK5RAP3-204ENST00000577664 CENPVQ7Z7K6 275 aaPredicted RBP8.67□□□□□ -1.02
CDK5RAP3-204ENST00000577664 C1QL4Q86Z23 238 aa8.67□□□□□ -1.02
CDK5RAP3-204ENST00000577664 SLC24A4Q8NFF2 622 aa8.67□□□□□ -1.02
CDK5RAP3-204ENST00000577664 CACNG8Q8WXS5 425 aa8.67□□□□□ -1.02
CDK5RAP3-204ENST00000577664 HINT2Q9BX68 163 aa8.67□□□□□ -1.02
CDK5RAP3-204ENST00000577664 PSENENQ9NZ42 101 aa8.67□□□□□ -1.02
CDK5RAP3-204ENST00000577664 OR5AC2Q9NZP5 309 aa8.67□□□□□ -1.02
CDK5RAP3-204ENST00000577664 THYN1Q9P016 225 aa8.67□□□□□ -1.02
CDK5RAP3-204ENST00000577664 LSM5Q9Y4Y9 91 aaKnown RBP8.67□□□□□ -1.02
CDK5RAP3-204ENST00000577664 hCG_2014768A0A024R1R8 64 aa8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 FNDC10F2Z333 226 aa8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 SSSCA1O60232 199 aa8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 NXPH3O95157 252 aa8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 SCGB1D2O95969 90 aa8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 NPY1RP25929 384 aa8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 FCGR2BP31994 310 aaPredicted RBP8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 GPX4P36969 197 aaPredicted RBP8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 RAB9AP51151 201 aa8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 RAB11AP62491 216 aa8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 EXOSC2Q13868 293 aaKnown RBP8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 TMEM95Q3KNT9 176 aa8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 SPINK9Q5DT21 86 aa8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 REC114Q7Z4M0 266 aa8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 AKAP14Q86UN6 197 aa8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 TMEM252Q8N6L7 170 aa8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 KLHDC1Q8N7A1 406 aa8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 NECAP1Q8NC96 275 aa8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 OR5T1Q8NG75 326 aa8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 THAP6Q8TBB0 222 aa8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 VN1R17PQ8TDU5 208 aa8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 ABHD5Q8WTS1 349 aa8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 USMG5Q96IX5 58 aa8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 LINC00527Q9UJ94 153 aa8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 STRAPQ9Y3F4 350 aaKnown RBP8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 RNF114Q9Y508 228 aa8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 COL7A1Q02388 2944 aa8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 SACSQ9NZJ4 4579 aa8.66□□□□□ -1.02
CDK5RAP3-204ENST00000577664 FAM223BA6NKX1 122 aa8.65□□□□□ -1.02
CDK5RAP3-204ENST00000577664 I3L2K1 104 aa8.65□□□□□ -1.02
CDK5RAP3-204ENST00000577664 L7N2F9 121 aa8.65□□□□□ -1.02
CDK5RAP3-204ENST00000577664 IFNA10P01566 189 aa8.65□□□□□ -1.02
CDK5RAP3-204ENST00000577664 C1QBP02746 253 aa8.65□□□□□ -1.02
CDK5RAP3-204ENST00000577664 IAPPP10997 89 aa8.65□□□□□ -1.02
CDK5RAP3-204ENST00000577664 DEFA4P12838 97 aa8.65□□□□□ -1.02
CDK5RAP3-204ENST00000577664 S100A10P60903 97 aa8.65□□□□□ -1.02
CDK5RAP3-204ENST00000577664 VAMP2P63027 116 aa8.65□□□□□ -1.02
CDK5RAP3-204ENST00000577664 BAXQ07812 192 aa8.65□□□□□ -1.02
CDK5RAP3-204ENST00000577664 ECSCRQ19T08 205 aa8.65□□□□□ -1.02
CDK5RAP3-204ENST00000577664 BEAN1Q3B7T3 259 aa8.65□□□□□ -1.02
CDK5RAP3-204ENST00000577664 LRRC37A5PQ49AS3 106 aa8.65□□□□□ -1.02
CDK5RAP3-204ENST00000577664 SPANXN5Q5MJ07 72 aa8.65□□□□□ -1.02
CDK5RAP3-204ENST00000577664 KPRPQ5T749 579 aaPredicted RBP8.65□□□□□ -1.02
CDK5RAP3-204ENST00000577664 FAM223AQ8IWN6 122 aa8.65□□□□□ -1.02
CDK5RAP3-204ENST00000577664 TAF15Q92804 592 aaKnown RBP eCLIP8.65□□□□□ -1.02
CDK5RAP3-204ENST00000577664 AQP10Q96PS8 301 aa8.65□□□□□ -1.02
CDK5RAP3-204ENST00000577664 OR4C12Q96R67 309 aa8.65□□□□□ -1.02
CDK5RAP3-204ENST00000577664 GGACTQ9BVM4 153 aa8.65□□□□□ -1.02
CDK5RAP3-204ENST00000577664 SLC25A31Q9H0C2 315 aa8.65□□□□□ -1.02
CDK5RAP3-204ENST00000577664 MBD2Q9UBB5 411 aa8.65□□□□□ -1.02
CDK5RAP3-204ENST00000577664 HYDINQ4G0P3 5121 aa8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 A0A0G2JLM5 398 aa8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 K7EIM0 57 aa8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 M0QZ24 198 aa8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 REG1AP05451 166 aa8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 APELAP0DMC3 54 aa8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 MDKP21741 143 aaPredicted RBP8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 CDX1P47902 265 aaPredicted RBP8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 SULT1A1P50225 295 aa8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 ARSJQ5FYB0 599 aaPredicted RBP8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 TCTEX1D4Q5JR98 221 aa8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 FAM209BQ5JX69 171 aa8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 SLC25A24Q6NUK1 477 aa8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 ZNF329Q86UD4 541 aa8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 ZNF546Q86UE3 836 aa8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 ZNF491Q8N8L2 437 aa8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 TMEM116Q8NCL8 245 aa8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 OR5AU1Q8NGC0 362 aa8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 OR11H4Q8NGC9 324 aa8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 CXorf58Q96LI9 332 aa8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 UBE2E2Q96LR5 201 aa8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 TXN2Q99757 166 aa8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 KLK15Q9H2R5 256 aa8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 TNFSF18Q9UNG2 199 aa8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 NOTCH3Q9UM47 2321 aa8.64□□□□□ -1.03
CDK5RAP3-204ENST00000577664 TRBV7-1A0A0A6YYK4 115 aa8.63□□□□□ -1.03
CDK5RAP3-204ENST00000577664 FAM24AA6NFZ4 105 aa8.63□□□□□ -1.03
CDK5RAP3-204ENST00000577664 RPL12P30050 165 aaKnown RBP8.63□□□□□ -1.03
CDK5RAP3-204ENST00000577664 S100A11P31949 105 aa8.63□□□□□ -1.03
CDK5RAP3-204ENST00000577664 RUNX1Q01196 453 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms