RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 C1QL4Q86Z23 238 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 BAP18Q8IXM2 172 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 OR2C3Q8N628 320 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 TMEM252Q8N6L7 170 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 KLHL30-AS1Q8NEE0 82 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 OR10W1Q8NGF6 305 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 OR4X2Q8NGF9 303 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 SGMS2Q8NHU3 365 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 TMEM167AQ8TBQ9 72 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 BSCL2Q96G97 398 aaPredicted RBP6.15□□□□□ -1.42
CCDC40-215ENST00000576033 RHOVQ96L33 236 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 RAB40CQ96S21 281 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 ZNF471Q9BX82 626 aaPredicted RBP6.15□□□□□ -1.42
CCDC40-215ENST00000576033 SLC25A32Q9H2D1 315 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 WFDC1Q9HC57 220 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 HSPB7Q9UBY9 170 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 FBXL17Q9UF56 701 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 S4R3C0 116 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 IGSF23A1L1A6 192 aa6.14□□□□□ -1.43
CCDC40-215ENST00000576033 UPK2O00526 184 aa6.14□□□□□ -1.43
CCDC40-215ENST00000576033 HPRT1P00492 218 aa6.14□□□□□ -1.43
CCDC40-215ENST00000576033 IGLV1-40P01703 118 aa6.14□□□□□ -1.43
CCDC40-215ENST00000576033 TRBV12-3P01733 135 aa6.14□□□□□ -1.43
CCDC40-215ENST00000576033 S100A1P23297 94 aa6.14□□□□□ -1.43
CCDC40-215ENST00000576033 LGALS7P47929 136 aa6.14□□□□□ -1.43
CCDC40-215ENST00000576033 AKR1C2P52895 323 aa6.14□□□□□ -1.43
CCDC40-215ENST00000576033 EIF5AP63241 154 aaKnown RBP6.14□□□□□ -1.43
CCDC40-215ENST00000576033 EWSR1Q01844 656 aaKnown RBP eCLIP6.14□□□□□ -1.43
CCDC40-215ENST00000576033 BAXQ07812 192 aa6.14□□□□□ -1.43
CCDC40-215ENST00000576033 RPL7L1Q6DKI1 246 aaKnown RBP6.14□□□□□ -1.43
CCDC40-215ENST00000576033 ZNF562Q6V9R5 426 aa6.14□□□□□ -1.43
CCDC40-215ENST00000576033 TEX45Q8NA69 505 aa6.14□□□□□ -1.43
CCDC40-215ENST00000576033 UBAC2Q8NBM4 344 aa6.14□□□□□ -1.43
CCDC40-215ENST00000576033 SMIM8Q96KF7 97 aa6.14□□□□□ -1.43
CCDC40-215ENST00000576033 RNF5Q99942 180 aa6.14□□□□□ -1.43
CCDC40-215ENST00000576033 FOXA2Q9Y261 457 aaPredicted RBP6.14□□□□□ -1.43
CCDC40-215ENST00000576033 DMRT1Q9Y5R6 373 aa6.14□□□□□ -1.43
CCDC40-215ENST00000576033 FAM24AA6NFZ4 105 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 NUDT19A8MXV4 375 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 SYNGR2O43760 224 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 SSSCA1O60232 199 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 JTBO76095 146 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 IGHV3-23P01764 117 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 NQO2P16083 231 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 PVALBP20472 110 aaPredicted RBP6.13□□□□□ -1.43
CCDC40-215ENST00000576033 RPL27AP46776 148 aaKnown RBP6.13□□□□□ -1.43
CCDC40-215ENST00000576033 TPPP2P59282 170 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 RAB14P61106 215 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 RPL8P62917 257 aaKnown RBP6.13□□□□□ -1.43
CCDC40-215ENST00000576033 TNFRSF9Q07011 255 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 FOXE3Q13461 319 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 PRR31Q5SQ13 230 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 TEX38Q6PEX7 206 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 TREML4Q6UXN2 200 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 NDUFA11Q86Y39 141 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 EIF4E3Q8N5X7 224 aaKnown RBP6.13□□□□□ -1.43
CCDC40-215ENST00000576033 RNF152Q8N8N0 203 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 OR52E5Q8NH55 327 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 LRRC20Q8TCA0 184 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 MYOZ3Q8TDC0 251 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 RAX2Q96IS3 184 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 FAM210AQ96ND0 272 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 GINS3Q9BRX5 216 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 HINT2Q9BX68 163 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 QTRT1Q9BXR0 403 aaKnown RBP6.13□□□□□ -1.43
CCDC40-215ENST00000576033 SLC25A31Q9H0C2 315 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 MAGT1Q9H0U3 335 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 BET1LQ9NYM9 111 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 PLA2G2EQ9NZK7 142 aa6.13□□□□□ -1.43
CCDC40-215ENST00000576033 TSSC4Q9Y5U2 329 aaPredicted RBP6.13□□□□□ -1.43
CCDC40-215ENST00000576033 IGHV4OR15-8A0A075B7B6 117 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 A0A087WW49 117 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 IGHV3-21A0A0B4J1V1 117 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 TEX50A0A1B0GTY4 177 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 IGLC7A0M8Q6 106 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 ANKRD34BA5PLL1 514 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 MFSD2BA6NFX1 497 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 C15orf61A6NNL5 157 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 G3V4G9 280 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 M0QZ24 198 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 MED6O75586 246 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 LY86O95711 162 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 HRASP01112 189 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 TRGV3P03979 118 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 RAB9AP51151 201 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 MFAP2P55001 183 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 SLC35B1P78383 322 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 NHLH2Q02577 135 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 WT1-ASQ06250 92 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 FAM74A1Q5RGS3 127 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 TMEM14EPQ6UXP3 125 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 HAPLN4Q86UW8 402 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 ZNF429Q86V71 674 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 MMD2Q8IY49 270 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 ZNF491Q8N8L2 437 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.12□□□□□ -1.43
CCDC40-215ENST00000576033 ZNF355PQ9NSJ1 428 aa6.12□□□□□ -1.43
CCDC40-215ENST00000576033 NOTCH3Q9UM47 2321 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 PMS2P5A8MQ11 134 aa6.11□□□□□ -1.43
CCDC40-215ENST00000576033 OR2J3O76001 311 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms