RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 EEF1AKMT3Q96AZ1 226 aa4.31□□□□□ -1.72
SMG6-219ENST00000575663 FAM3DQ96BQ1 224 aa4.31□□□□□ -1.72
SMG6-219ENST00000575663 SPIN2AQ99865 258 aa4.31□□□□□ -1.72
SMG6-219ENST00000575663 SPIN2BQ9BPZ2 258 aa4.31□□□□□ -1.72
SMG6-219ENST00000575663 URM1Q9BTM9 101 aaKnown RBP4.31□□□□□ -1.72
SMG6-219ENST00000575663 MIXL1Q9H2W2 232 aa4.31□□□□□ -1.72
SMG6-219ENST00000575663 VCX2Q9H322 139 aa4.31□□□□□ -1.72
SMG6-219ENST00000575663 C5orf66Q9H5L9 145 aa4.31□□□□□ -1.72
SMG6-219ENST00000575663 TMEM140Q9NV12 185 aa4.31□□□□□ -1.72
SMG6-219ENST00000575663 V9GYH0 126 aa4.31□□□□□ -1.72
SMG6-219ENST00000575663 IGLV2-18A0A075B6J9 118 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 A0A1W2PPK0 400 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 A0A1W2PPQ1 181 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 NAP1L6A6NFF2 107 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 CENPXA8MT69 81 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 TMEM14DPA8MWL7 114 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 EPM2AB3EWF7 344 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 GABARAPH6UMI1 98 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 M0R1X1 148 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 HPGDSO60760 199 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 IFNA21P01568 189 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 IFNA17P01571 189 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 IGLV2-23P01705 113 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 CRYGBP07316 175 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 MGMTP16455 207 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 ELK1P19419 428 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 DTYMKP23919 212 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 ZBTB25P24278 435 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 HLA-DMBP28068 263 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 RPL35P42766 123 aaKnown RBP4.3□□□□□ -1.72
SMG6-219ENST00000575663 ELLP55199 621 aaPredicted RBP4.3□□□□□ -1.72
SMG6-219ENST00000575663 CMC4P56277 68 aaPredicted RBP4.3□□□□□ -1.72
SMG6-219ENST00000575663 OR10A3P58181 314 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 IFITM2Q01629 132 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 RTL8BQ17RB0 113 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 AWAT2Q6E213 333 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 GLIPR1L1Q6UWM5 242 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 CLEC19AQ6UXS0 136 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 Q6ZRM9 215 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 ZNF767PQ75MW2 155 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 TMEM17Q86X19 198 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 FAM89BQ8N5H3 189 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 TTC9CQ8N5M4 171 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 JAGN1Q8N5M9 183 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 OR56B1Q8NGI3 324 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 BSCL2Q96G97 398 aaPredicted RBP4.3□□□□□ -1.72
SMG6-219ENST00000575663 ZNF479Q96JC4 524 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 CCDC140Q96MF4 163 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 NEDD4LQ96PU5 975 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 GFI1Q99684 422 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 AGMATQ9BSE5 352 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 SELENOIQ9C0D9 397 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 SRRQ9GZT4 340 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 BIN3Q9NQY0 253 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 GSN-AS1Q9NRJ2 163 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 COPZ2Q9P299 210 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 MGAT4CQ9UBM8 478 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 MGAT4AQ9UM21 535 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 ZNF257Q9Y2Q1 563 aa4.3□□□□□ -1.72
SMG6-219ENST00000575663 DEFB131BA0A096LNP1 70 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 TRBV7-1A0A0A6YYK4 115 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 MED6O75586 246 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 S1PR2O95136 353 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 IGHV3-23P01764 117 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 C8orf88P0DMB2 117 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 RRASP10301 218 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 IL7P13232 177 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 MIFP14174 115 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 TBPP20226 339 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 QRFPP83859 136 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 ASAH1Q13510 395 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 OXA1LQ15070 435 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 CDK10Q15131 360 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 P2RY14Q15391 338 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 ZNF79Q15937 498 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 PRSS8Q16651 343 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 PYDC2Q56P42 97 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 TMEM69Q5SWH9 247 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 TRIQKQ629K1 86 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 UNQ9165/PRO28630Q6UXU0 137 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 Q6ZR54 194 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 C5orf24Q7Z6I8 188 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 LYSMD2Q8IV50 215 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 APRG1Q8IVJ8 170 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 TEX45Q8NA69 505 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 Q8NAQ8 132 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.29□□□□□ -1.72
SMG6-219ENST00000575663 NUDT10Q8NFP7 164 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 LGALS14Q8TCE9 139 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 SMIM4Q8WVI0 70 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 FCAMRQ8WWV6 532 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 CXorf58Q96LI9 332 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 Q96M66 194 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 PFDN5Q99471 154 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 PDCD10Q9BUL8 212 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 TM2D1Q9BX74 207 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 PARD6GQ9BYG4 376 aaPredicted RBP4.29□□□□□ -1.72
SMG6-219ENST00000575663 C11orf54Q9H0W9 315 aaPredicted RBP4.29□□□□□ -1.72
SMG6-219ENST00000575663 BANF2Q9H503 90 aa4.29□□□□□ -1.72
SMG6-219ENST00000575663 DAZ1Q9NQZ3 744 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms