RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 MISP3Q96FF7 219 aa6.49□□□□□ -1.37
SMG6-218ENST00000575454 C1QTNF4Q9BXJ3 329 aa6.49□□□□□ -1.37
SMG6-218ENST00000575454 DUSP21Q9H596 190 aa6.49□□□□□ -1.37
SMG6-218ENST00000575454 RABAC1Q9UI14 185 aa6.49□□□□□ -1.37
SMG6-218ENST00000575454 X6R8D5 127 aa6.49□□□□□ -1.37
SMG6-218ENST00000575454 DNAH5Q8TE73 4624 aa6.48□□□□□ -1.37
SMG6-218ENST00000575454 SRRM2Q9UQ35 2752 aaKnown RBP6.48□□□□□ -1.37
SMG6-218ENST00000575454 TMEM189A5PLL7 270 aa6.48□□□□□ -1.37
SMG6-218ENST00000575454 I3L2K1 104 aa6.48□□□□□ -1.37
SMG6-218ENST00000575454 SSX5O60225 188 aa6.48□□□□□ -1.37
SMG6-218ENST00000575454 SCGB2A1O75556 95 aa6.48□□□□□ -1.37
SMG6-218ENST00000575454 KRASP01116 189 aa6.48□□□□□ -1.37
SMG6-218ENST00000575454 CD74P04233 296 aa6.48□□□□□ -1.37
SMG6-218ENST00000575454 F2RP25116 425 aa6.48□□□□□ -1.37
SMG6-218ENST00000575454 EIF2B2P49770 351 aaKnown RBP6.48□□□□□ -1.37
SMG6-218ENST00000575454 FXYD4P59646 89 aa6.48□□□□□ -1.37
SMG6-218ENST00000575454 RNF212Q495C1 297 aa6.48□□□□□ -1.37
SMG6-218ENST00000575454 OGFRL1Q5TC84 451 aaPredicted RBP6.48□□□□□ -1.37
SMG6-218ENST00000575454 C1orf134Q5TEV5 83 aa6.48□□□□□ -1.37
SMG6-218ENST00000575454 ZNF600Q6ZNG1 722 aa6.48□□□□□ -1.37
SMG6-218ENST00000575454 Q6ZR54 194 aa6.48□□□□□ -1.37
SMG6-218ENST00000575454 PRSS48Q7RTY5 328 aa6.48□□□□□ -1.37
SMG6-218ENST00000575454 CMTM1Q8IZ96 169 aa6.48□□□□□ -1.37
SMG6-218ENST00000575454 MOB3AQ96BX8 217 aa6.48□□□□□ -1.37
SMG6-218ENST00000575454 NARS2Q96I59 477 aaKnown RBP6.48□□□□□ -1.37
SMG6-218ENST00000575454 TEX48A0A1B0GUV7 120 aa6.47□□□□□ -1.37
SMG6-218ENST00000575454 TRDV1A0A1B0GX56 115 aa6.47□□□□□ -1.37
SMG6-218ENST00000575454 NOTOA8MTQ0 251 aa6.47□□□□□ -1.37
SMG6-218ENST00000575454 MT-CO2P00403 227 aa6.47□□□□□ -1.37
SMG6-218ENST00000575454 SPART-AS1P0CW21 52 aa6.47□□□□□ -1.37
SMG6-218ENST00000575454 NPPCP23582 126 aa6.47□□□□□ -1.37
SMG6-218ENST00000575454 CBX5P45973 191 aa6.47□□□□□ -1.37
SMG6-218ENST00000575454 HERV-K104P61576 105 aa6.47□□□□□ -1.37
SMG6-218ENST00000575454 ERHP84090 104 aaKnown RBP6.47□□□□□ -1.37
SMG6-218ENST00000575454 ACTL10Q5JWF8 245 aa6.47□□□□□ -1.37
SMG6-218ENST00000575454 ZNF818PQ6ZRF7 136 aa6.47□□□□□ -1.37
SMG6-218ENST00000575454 Q6ZRM9 215 aa6.47□□□□□ -1.37
SMG6-218ENST00000575454 ZNF367Q7RTV3 350 aa6.47□□□□□ -1.37
SMG6-218ENST00000575454 LILRB2Q8N423 598 aa6.47□□□□□ -1.37
SMG6-218ENST00000575454 FAM24BQ8N5W8 94 aa6.47□□□□□ -1.37
SMG6-218ENST00000575454 MAPKAPK5-AS1Q8N8E1 139 aa6.47□□□□□ -1.37
SMG6-218ENST00000575454 ZNF114Q8NC26 417 aa6.47□□□□□ -1.37
SMG6-218ENST00000575454 CSNK1G2-AS1Q8NCQ2 148 aa6.47□□□□□ -1.37
SMG6-218ENST00000575454 METTL26Q96S19 204 aa6.47□□□□□ -1.37
SMG6-218ENST00000575454 DAPK2Q9UIK4 370 aa6.47□□□□□ -1.37
SMG6-218ENST00000575454 NSG2Q9Y328 171 aa6.47□□□□□ -1.37
SMG6-218ENST00000575454 IGLV2-18A0A075B6J9 118 aa6.46□□□□□ -1.38
SMG6-218ENST00000575454 A0A0A6YYH2 397 aa6.46□□□□□ -1.38
SMG6-218ENST00000575454 IGHV3-66A0A0C4DH42 116 aa6.46□□□□□ -1.38
SMG6-218ENST00000575454 HELTA6NFD8 242 aa6.46□□□□□ -1.38
SMG6-218ENST00000575454 A6NJ64 397 aa6.46□□□□□ -1.38
SMG6-218ENST00000575454 C16orf90A8MZG2 172 aa6.46□□□□□ -1.38
SMG6-218ENST00000575454 K7EQG2 157 aa6.46□□□□□ -1.38
SMG6-218ENST00000575454 PGLYRP1O75594 196 aaPredicted RBP6.46□□□□□ -1.38
SMG6-218ENST00000575454 APOHP02749 345 aaPredicted RBP6.46□□□□□ -1.38
SMG6-218ENST00000575454 C4BPBP20851 252 aa6.46□□□□□ -1.38
SMG6-218ENST00000575454 GNRHRP30968 328 aa6.46□□□□□ -1.38
SMG6-218ENST00000575454 FGF9P31371 208 aaPredicted RBP6.46□□□□□ -1.38
SMG6-218ENST00000575454 LPAR6P43657 344 aa6.46□□□□□ -1.38
SMG6-218ENST00000575454 FAM3BP58499 235 aaPredicted RBP6.46□□□□□ -1.38
SMG6-218ENST00000575454 TMEM17Q86X19 198 aa6.46□□□□□ -1.38
SMG6-218ENST00000575454 STXBP6Q8NFX7 210 aa6.46□□□□□ -1.38
SMG6-218ENST00000575454 OR5AP2Q8NGF4 316 aa6.46□□□□□ -1.38
SMG6-218ENST00000575454 OR4A16Q8NH70 328 aa6.46□□□□□ -1.38
SMG6-218ENST00000575454 PINX1Q96BK5 328 aaKnown RBP6.46□□□□□ -1.38
SMG6-218ENST00000575454 RNF167Q9H6Y7 350 aa6.46□□□□□ -1.38
SMG6-218ENST00000575454 NDUFB11Q9NX14 153 aa6.46□□□□□ -1.38
SMG6-218ENST00000575454 RHBDL2Q9NX52 303 aa6.46□□□□□ -1.38
SMG6-218ENST00000575454 CELA1Q9UNI1 258 aa6.46□□□□□ -1.38
SMG6-218ENST00000575454 PUS1Q9Y606 427 aaKnown RBP eCLIP6.46□□□□□ -1.38
SMG6-218ENST00000575454 APOBP04114 4563 aaKnown RBP6.45□□□□□ -1.38
SMG6-218ENST00000575454 SMIM9A6NGZ8 99 aa6.45□□□□□ -1.38
SMG6-218ENST00000575454 KNCNA6PVL3 124 aa6.45□□□□□ -1.38
SMG6-218ENST00000575454 RLN1P04808 185 aa6.45□□□□□ -1.38
SMG6-218ENST00000575454 ZNF688P0C7X2 276 aa6.45□□□□□ -1.38
SMG6-218ENST00000575454 PTHLHP12272 177 aa6.45□□□□□ -1.38
SMG6-218ENST00000575454 S100GP29377 79 aa6.45□□□□□ -1.38
SMG6-218ENST00000575454 G6PCP35575 357 aa6.45□□□□□ -1.38
SMG6-218ENST00000575454 AP2S1P53680 142 aaPredicted RBP6.45□□□□□ -1.38
SMG6-218ENST00000575454 SNRPD3P62318 126 aaKnown RBP6.45□□□□□ -1.38
SMG6-218ENST00000575454 PRCDQ00LT1 54 aa6.45□□□□□ -1.38
SMG6-218ENST00000575454 TBCEQ15813 527 aaPredicted RBP6.45□□□□□ -1.38
SMG6-218ENST00000575454 C22orf42Q6IC83 251 aa6.45□□□□□ -1.38
SMG6-218ENST00000575454 DHRS11Q6UWP2 260 aa6.45□□□□□ -1.38
SMG6-218ENST00000575454 ZNF767PQ75MW2 155 aa6.45□□□□□ -1.38
SMG6-218ENST00000575454 FCAMRQ8WWV6 532 aa6.45□□□□□ -1.38
SMG6-218ENST00000575454 RAB40CQ96S21 281 aa6.45□□□□□ -1.38
SMG6-218ENST00000575454 NEU1Q99519 415 aa6.45□□□□□ -1.38
SMG6-218ENST00000575454 FAM212BQ9NTI7 297 aaPredicted RBP6.45□□□□□ -1.38
SMG6-218ENST00000575454 CLEC5AQ9NY25 188 aa6.45□□□□□ -1.38
SMG6-218ENST00000575454 TRAV18A0A075B6X5 111 aa6.44□□□□□ -1.38
SMG6-218ENST00000575454 CORTO00230 105 aa6.44□□□□□ -1.38
SMG6-218ENST00000575454 EBAG9O00559 213 aa6.44□□□□□ -1.38
SMG6-218ENST00000575454 TMEM50AO95807 157 aa6.44□□□□□ -1.38
SMG6-218ENST00000575454 CRYBB3P26998 211 aa6.44□□□□□ -1.38
SMG6-218ENST00000575454 SNCAP37840 140 aa6.44□□□□□ -1.38
SMG6-218ENST00000575454 P2RY1P47900 373 aa6.44□□□□□ -1.38
SMG6-218ENST00000575454 HOXA1P49639 335 aaPredicted RBP6.44□□□□□ -1.38
SMG6-218ENST00000575454 SUB1P53999 127 aaKnown RBP eCLIP6.44□□□□□ -1.38
SMG6-218ENST00000575454 SCAND1P57086 179 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms