RNA–Protein interactions for RNA: ENST00000574855.1

NUP88-209, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-209ENST00000574855 NIT2Q9NQR4 276 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 FAIMQ9NVQ4 179 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 DPM3Q9P2X0 92 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 DHCR7Q9UBM7 475 aaKnown RBP2.44□□□□□ -2.02
NUP88-209ENST00000574855 LINC00527Q9UJ94 153 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 PCTPQ9UKL6 214 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 ANAPC10Q9UM13 185 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 DNAJC15Q9Y5T4 150 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 KIAA1671Q9BY89 1806 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 NCKAP5O14513 1909 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 TRAV8-1A0A0A6YYK1 113 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 A0A0J9YY10 115 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 LOC102725191A0A1B0GVB3 256 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 A0A1B0GX78 115 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 DUXBA0A1W2PPF3 345 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 OR4C45A6NMZ5 311 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 RIIAD1A6NNX1 92 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 C4orf51C9J302 202 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 F5H5P2 479 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 M0R1X1 148 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 CCL22O00626 93 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 UBFD1O14562 309 aaKnown RBP2.43□□□□□ -2.02
NUP88-209ENST00000574855 GNGT2O14610 69 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 CHTF8P0CG12 524 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 CCL5P13501 91 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 CTSEP14091 401 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 PPIBP23284 216 aaKnown RBP2.43□□□□□ -2.02
NUP88-209ENST00000574855 S100A3P33764 101 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 PSMB3P49720 205 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 AQP4P55087 323 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 TAS2R30P59541 319 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 RPL23P62829 140 aaKnown RBP2.43□□□□□ -2.02
NUP88-209ENST00000574855 HERVK_113P63121 156 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 SELENOWP63302 87 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 PSG9Q00887 426 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 ENDOGQ14249 297 aaKnown RBP2.43□□□□□ -2.02
NUP88-209ENST00000574855 TIMM50Q3ZCQ8 353 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 OCIAD2Q56VL3 154 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 LRRC10Q5BKY1 277 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 NHLRC3Q5JS37 347 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 ZNF773Q6PK81 442 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 UNQ9165/PRO28630Q6UXU0 137 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 IL34Q6ZMJ4 242 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 DRAM1Q8N682 238 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 KRTCAP2Q8N6L1 136 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 TMEM229BQ8NBD8 167 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 ZNF555Q8NEP9 628 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 OR51H1Q8NH63 302 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 OR5W2Q8NH69 310 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 ADAT3Q96EY9 351 aaPredicted RBP2.43□□□□□ -2.02
NUP88-209ENST00000574855 IGF2BP2-AS1Q96M15 143 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 TP53RKQ96S44 253 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 ANAPC13Q9BS18 74 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 PAXXQ9BUH6 204 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 SMIM3Q9BZL3 60 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 OR2H1Q9GZK4 316 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 POLR2J2Q9GZM3 115 aaKnown RBP2.43□□□□□ -2.02
NUP88-209ENST00000574855 POLR2J3Q9H1A7 115 aaKnown RBP2.43□□□□□ -2.02
NUP88-209ENST00000574855 OR2D2Q9H210 308 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 JPT2Q9H910 190 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 CACYBPQ9HB71 228 aaKnown RBP2.43□□□□□ -2.02
NUP88-209ENST00000574855 PARP11Q9NR21 331 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 TMEM38BQ9NVV0 291 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 RPS6KB2Q9UBS0 482 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 TBX21Q9UL17 535 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 TRAPPC2LQ9UL33 140 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 LAMTOR2Q9Y2Q5 125 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 MGAMO43451 1857 aa2.43□□□□□ -2.02
NUP88-209ENST00000574855 PDCD11Q14690 1871 aaKnown RBP2.43□□□□□ -2.02
NUP88-209ENST00000574855 TSC2P49815 1807 aa2.42□□□□□ -2.02
NUP88-209ENST00000574855 MYO18AQ92614 2054 aaKnown RBP2.42□□□□□ -2.02
NUP88-209ENST00000574855 TRPM7Q96QT4 1865 aa2.42□□□□□ -2.02
NUP88-209ENST00000574855 TRAV4A0A0B4J268 109 aa2.42□□□□□ -2.02
NUP88-209ENST00000574855 A0A1B0GW64 132 aa2.42□□□□□ -2.02
NUP88-209ENST00000574855 C20orf202A1L168 122 aa2.42□□□□□ -2.02
NUP88-209ENST00000574855 LOC730098B7Z3J9 87 aa2.42□□□□□ -2.02
NUP88-209ENST00000574855 C9JAW5 83 aa2.42□□□□□ -2.02
NUP88-209ENST00000574855 CLDN25C9JDP6 229 aa2.42□□□□□ -2.02
NUP88-209ENST00000574855 OR1I1O60431 355 aa2.42□□□□□ -2.02
NUP88-209ENST00000574855 GGCTO75223 188 aaKnown RBP2.42□□□□□ -2.02
NUP88-209ENST00000574855 SOD3P08294 240 aa2.42□□□□□ -2.02
NUP88-209ENST00000574855 ZNF806P0C7X5 589 aa2.42□□□□□ -2.02
NUP88-209ENST00000574855 RPS4Y1P22090 263 aaKnown RBP2.42□□□□□ -2.02
NUP88-209ENST00000574855 EVI2AP22794 236 aa2.42□□□□□ -2.02
NUP88-209ENST00000574855 COX7A1P24310 79 aa2.42□□□□□ -2.02
NUP88-209ENST00000574855 IL3RAP26951 378 aa2.42□□□□□ -2.02
NUP88-209ENST00000574855 CMPK1P30085 196 aa2.42□□□□□ -2.02
NUP88-209ENST00000574855 S100A11P31949 105 aa2.42□□□□□ -2.02
NUP88-209ENST00000574855 PPP1CCP36873 323 aaKnown RBP2.42□□□□□ -2.02
NUP88-209ENST00000574855 GABRA2P47869 451 aa2.42□□□□□ -2.02
NUP88-209ENST00000574855 SPINT3P49223 89 aa2.42□□□□□ -2.02
NUP88-209ENST00000574855 DIO3P55073 304 aa2.42□□□□□ -2.02
NUP88-209ENST00000574855 LOXL1Q08397 574 aaPredicted RBP2.42□□□□□ -2.02
NUP88-209ENST00000574855 FABP9Q0Z7S8 132 aa2.42□□□□□ -2.02
NUP88-209ENST00000574855 BIKQ13323 160 aa2.42□□□□□ -2.02
NUP88-209ENST00000574855 MMDQ15546 238 aa2.42□□□□□ -2.02
NUP88-209ENST00000574855 SSX1Q16384 188 aa2.42□□□□□ -2.02
NUP88-209ENST00000574855 COA6Q5JTJ3 125 aaKnown RBP2.42□□□□□ -2.02
NUP88-209ENST00000574855 UBE2NLQ5JXB2 153 aa2.42□□□□□ -2.02
NUP88-209ENST00000574855 DNLZQ5SXM8 178 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms