RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 ISLRO14498 428 aa15.52■□□□□ 0.08
SCARF1-206ENST00000573852 MT-ND6P03923 174 aa15.52■□□□□ 0.08
SCARF1-206ENST00000573852 MGST1P10620 155 aaKnown RBP15.52■□□□□ 0.08
SCARF1-206ENST00000573852 BRS3P32247 399 aa15.52■□□□□ 0.08
SCARF1-206ENST00000573852 KRTDAPP60985 99 aa15.52■□□□□ 0.08
SCARF1-206ENST00000573852 ASPHD1Q5U4P2 390 aa15.52■□□□□ 0.08
SCARF1-206ENST00000573852 MRPL54Q6P161 138 aaKnown RBP15.52■□□□□ 0.08
SCARF1-206ENST00000573852 ZNF474Q6S9Z5 364 aaPredicted RBP15.52■□□□□ 0.08
SCARF1-206ENST00000573852 SLC25A33Q9BSK2 321 aa15.52■□□□□ 0.08
SCARF1-206ENST00000573852 TBL2Q9Y4P3 447 aaKnown RBP15.52■□□□□ 0.08
SCARF1-206ENST00000573852 A6NNC1 897 aa15.52■□□□□ 0.07
SCARF1-206ENST00000573852 SLC25A48Q6ZT89 311 aaKnown RBP15.52■□□□□ 0.07
SCARF1-206ENST00000573852 RND1Q92730 232 aa15.52■□□□□ 0.07
SCARF1-206ENST00000573852 PLCE1Q9P212 2302 aa15.52■□□□□ 0.07
SCARF1-206ENST00000573852 IGLV3-9A0A075B6K5 115 aa15.51■□□□□ 0.07
SCARF1-206ENST00000573852 TRAV5A0A0B4J249 113 aa15.51■□□□□ 0.07
SCARF1-206ENST00000573852 SAA1P0DJI8 122 aaPredicted RBP15.51■□□□□ 0.07
SCARF1-206ENST00000573852 GATA4P43694 442 aa15.51■□□□□ 0.07
SCARF1-206ENST00000573852 PPOXP50336 477 aa15.51■□□□□ 0.07
SCARF1-206ENST00000573852 TAS2R45P59539 299 aa15.51■□□□□ 0.07
SCARF1-206ENST00000573852 RTL8BQ17RB0 113 aa15.51■□□□□ 0.07
SCARF1-206ENST00000573852 IBA57Q5T440 356 aaKnown RBP15.51■□□□□ 0.07
SCARF1-206ENST00000573852 DEFB123Q8N688 67 aa15.51■□□□□ 0.07
SCARF1-206ENST00000573852 C8orf88P0DMB2 117 aa15.51■□□□□ 0.07
SCARF1-206ENST00000573852 OR10J3Q5JRS4 329 aa15.51■□□□□ 0.07
SCARF1-206ENST00000573852 PNKDQ8N490 385 aa15.51■□□□□ 0.07
SCARF1-206ENST00000573852 NHLRC2Q8NBF2 726 aa15.51■□□□□ 0.07
SCARF1-206ENST00000573852 NRN1Q9NPD7 142 aa15.51■□□□□ 0.07
SCARF1-206ENST00000573852 SERTAD4Q9NUC0 356 aa15.51■□□□□ 0.07
SCARF1-206ENST00000573852 RPUSD1Q9UJJ7 312 aaKnown RBP15.51■□□□□ 0.07
SCARF1-206ENST00000573852 A0A1W2PRE2 83 aa15.51■□□□□ 0.07
SCARF1-206ENST00000573852 SMIM27A0A1W2PRY6 76 aa15.51■□□□□ 0.07
SCARF1-206ENST00000573852 A0A1W2PS18 150 aa15.51■□□□□ 0.07
SCARF1-206ENST00000573852 CA1P00915 261 aaPredicted RBP15.51■□□□□ 0.07
SCARF1-206ENST00000573852 RPLP1P05386 114 aaKnown RBP15.51■□□□□ 0.07
SCARF1-206ENST00000573852 TIMM23BQ5SRD1 257 aa15.51■□□□□ 0.07
SCARF1-206ENST00000573852 LINC00479Q96M42 142 aa15.51■□□□□ 0.07
SCARF1-206ENST00000573852 C19orf24Q9BVV8 132 aa15.51■□□□□ 0.07
SCARF1-206ENST00000573852 MBD3L4A6NDZ8 208 aaPredicted RBP15.5■□□□□ 0.07
SCARF1-206ENST00000573852 MBD3L3A6NE82 208 aaPredicted RBP15.5■□□□□ 0.07
SCARF1-206ENST00000573852 MBD3L5A6NJ08 208 aaPredicted RBP15.5■□□□□ 0.07
SCARF1-206ENST00000573852 BMPR1BO00238 502 aa15.5■□□□□ 0.07
SCARF1-206ENST00000573852 RPL19P84098 196 aaKnown RBP15.5■□□□□ 0.07
SCARF1-206ENST00000573852 CD69Q07108 199 aa15.5■□□□□ 0.07
SCARF1-206ENST00000573852 MRPL52Q86TS9 123 aaKnown RBP15.5■□□□□ 0.07
SCARF1-206ENST00000573852 OR2T6Q8NHC8 308 aa15.5■□□□□ 0.07
SCARF1-206ENST00000573852 MBD3L2Q8NHZ7 208 aaPredicted RBP15.5■□□□□ 0.07
SCARF1-206ENST00000573852 FAM167A-AS1Q96KT0 104 aa15.5■□□□□ 0.07
SCARF1-206ENST00000573852 LINC00574Q9H8X3 128 aa15.5■□□□□ 0.07
SCARF1-206ENST00000573852 ZNF586Q9NXT0 402 aa15.5■□□□□ 0.07
SCARF1-206ENST00000573852 SMG1Q96Q15 3661 aaKnown RBP15.5■□□□□ 0.07
SCARF1-206ENST00000573852 DIRC3C9JPN6 131 aa15.5■□□□□ 0.07
SCARF1-206ENST00000573852 M0R296 226 aa15.5■□□□□ 0.07
SCARF1-206ENST00000573852 ZNF253O75346 499 aa15.5■□□□□ 0.07
SCARF1-206ENST00000573852 AMY1AP04745 511 aa15.5■□□□□ 0.07
SCARF1-206ENST00000573852 SFTPCP11686 197 aa15.5■□□□□ 0.07
SCARF1-206ENST00000573852 SRIP30626 198 aa15.5■□□□□ 0.07
SCARF1-206ENST00000573852 AMTP48728 403 aa15.5■□□□□ 0.07
SCARF1-206ENST00000573852 TNFAIP6P98066 277 aaPredicted RBP15.5■□□□□ 0.07
SCARF1-206ENST00000573852 RELQ04864 619 aaPredicted RBP15.5■□□□□ 0.07
SCARF1-206ENST00000573852 RPRMLQ8N4K4 120 aa15.5■□□□□ 0.07
SCARF1-206ENST00000573852 OR1L8Q8NGR8 309 aa15.5■□□□□ 0.07
SCARF1-206ENST00000573852 FAM168AQ92567 244 aa15.5■□□□□ 0.07
SCARF1-206ENST00000573852 SLC25A2Q9BXI2 301 aa15.5■□□□□ 0.07
SCARF1-206ENST00000573852 CDC42EP3Q9UKI2 254 aa15.5■□□□□ 0.07
SCARF1-206ENST00000573852 PSMB11A5LHX3 300 aa15.49■□□□□ 0.07
SCARF1-206ENST00000573852 IGHV1-46P01743 117 aa15.49■□□□□ 0.07
SCARF1-206ENST00000573852 PMCHP20382 165 aa15.49■□□□□ 0.07
SCARF1-206ENST00000573852 ZNF788Q6ZQV5 615 aa15.49■□□□□ 0.07
SCARF1-206ENST00000573852 KCNS1Q96KK3 526 aa15.49■□□□□ 0.07
SCARF1-206ENST00000573852 BET1LQ9NYM9 111 aa15.49■□□□□ 0.07
SCARF1-206ENST00000573852 ARFGEF3Q5TH69 2177 aa15.49■□□□□ 0.07
SCARF1-206ENST00000573852 OR5B3Q8NH48 314 aa15.49■□□□□ 0.07
SCARF1-206ENST00000573852 SSBP2P81877 361 aaPredicted RBP15.48■□□□□ 0.07
SCARF1-206ENST00000573852 TMEM208Q9BTX3 173 aa15.48■□□□□ 0.07
SCARF1-206ENST00000573852 E7EUB6 86 aa15.48■□□□□ 0.07
SCARF1-206ENST00000573852 RNF2Q99496 336 aa15.48■□□□□ 0.07
SCARF1-206ENST00000573852 SSBP3Q9BWW4 388 aaPredicted RBP15.48■□□□□ 0.07
SCARF1-206ENST00000573852 ATP5IP56385 69 aaPredicted RBP15.47■□□□□ 0.07
SCARF1-206ENST00000573852 UBE2L3P68036 154 aaKnown RBP15.47■□□□□ 0.07
SCARF1-206ENST00000573852 COX19Q49B96 90 aa15.47■□□□□ 0.07
SCARF1-206ENST00000573852 MRPL20Q9BYC9 149 aaKnown RBP15.47■□□□□ 0.07
SCARF1-206ENST00000573852 DYSFO75923 2080 aa15.47■□□□□ 0.07
SCARF1-206ENST00000573852 HLA-DQA1P01909 254 aa15.47■□□□□ 0.07
SCARF1-206ENST00000573852 BATFQ16520 125 aa15.47■□□□□ 0.07
SCARF1-206ENST00000573852 C22orf34Q6ZV56 151 aa15.47■□□□□ 0.07
SCARF1-206ENST00000573852 NDUFA4L2Q9NRX3 87 aa15.47■□□□□ 0.07
SCARF1-206ENST00000573852 TM4SF5O14894 197 aa15.46■□□□□ 0.07
SCARF1-206ENST00000573852 CHRNB4P30926 498 aa15.46■□□□□ 0.07
SCARF1-206ENST00000573852 OR4B1Q8NGF8 309 aa15.46■□□□□ 0.07
SCARF1-206ENST00000573852 DNAJC4Q9NNZ3 241 aa15.46■□□□□ 0.07
SCARF1-206ENST00000573852 IZUMO1RA6ND01 250 aa15.46■□□□□ 0.07
SCARF1-206ENST00000573852 ZNF324O75467 553 aaPredicted RBP15.46■□□□□ 0.07
SCARF1-206ENST00000573852 PYYP10082 97 aa15.46■□□□□ 0.07
SCARF1-206ENST00000573852 CTRLP40313 264 aa15.46■□□□□ 0.07
SCARF1-206ENST00000573852 DEFB109BQ30KR1 87 aa15.46■□□□□ 0.07
SCARF1-206ENST00000573852 ZNF833PQ6ZTB9 187 aa15.46■□□□□ 0.07
SCARF1-206ENST00000573852 NIT1Q86X76 327 aa15.46■□□□□ 0.07
SCARF1-206ENST00000573852 FAM19A2Q8N3H0 131 aa15.46■□□□□ 0.07
SCARF1-206ENST00000573852 MRPL32Q9BYC8 188 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms