RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 LY96Q9Y6Y9 160 aa3.81□□□□□ -1.8
CDC27-215ENST00000573550 FREM1Q5H8C1 2179 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 MED12LQ86YW9 2145 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 CHD3Q12873 2000 aaKnown RBP3.8□□□□□ -1.8
CDC27-215ENST00000573550 PTPRBP23467 1997 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 LAMA1P25391 3075 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 IGHV3OR16-10A0A075B7F0 116 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 TGIF2-C20orf24A0A0A6YYL0 155 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 CEBPZOSA8MTT3 80 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 C12orf77C9JDV5 145 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 H3BP45 60 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 H7BYZ3 331 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 MLNRO43193 412 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 TNFSF12O43508 249 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 ZNF737O75373 536 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 RHBDL1O75783 438 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 GCGP01275 180 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 IGKV3-15P01624 115 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 IGHV3-9P01782 118 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 TRGC2P03986 189 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 SOD3P08294 240 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 TRGC1P0CF51 173 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 CCNOP22674 350 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 CD1BP29016 333 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 MAGEA5P43359 124 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 NDUFA6P56556 154 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 SSTP61278 116 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 DEFA6Q01524 100 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 SLC10A1Q14973 349 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 JOSD1Q15040 202 aaPredicted RBP3.8□□□□□ -1.8
CDC27-215ENST00000573550 OR2B11Q5JQS5 317 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 ACTL10Q5JWF8 245 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 NCMAPQ5T1S8 102 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 SPINK14Q6IE38 97 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 OR2T2Q6IF00 324 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 ZNF343Q6P1L6 599 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 KCNIP4Q6PIL6 250 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 Q6ZT83 130 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 SSX9Q7RTT3 188 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 MDP1Q86V88 176 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 FGFRL1Q8N441 504 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 RPP25LQ8N5L8 163 aaKnown RBP3.8□□□□□ -1.8
CDC27-215ENST00000573550 ZNF709Q8N972 641 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 Q8NBF4 154 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 NUP37Q8NFH4 326 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 C11orf45Q8TAV5 145 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 DTD1Q8TEA8 209 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 IL1F10Q8WWZ1 152 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 FRZBQ92765 325 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 C2orf48Q96LS8 159 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 PACRGQ96M98 296 aaPredicted RBP3.8□□□□□ -1.8
CDC27-215ENST00000573550 NOL4LQ96MY1 436 aaPredicted RBP3.8□□□□□ -1.8
CDC27-215ENST00000573550 HIST1H2BLQ99880 126 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 SFXN3Q9BWM7 321 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 BCL2L14Q9BZR8 327 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 OR2D2Q9H210 308 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 CXXC4Q9H2H0 198 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 PARLQ9H300 379 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 SLC39A9Q9NUM3 307 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 CLCF1Q9UBD9 225 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 SMAD5-AS1Q9Y6J3 95 aa3.8□□□□□ -1.8
CDC27-215ENST00000573550 ZNF407Q9C0G0 2248 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 ESPL1Q14674 2120 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 TRIOBPQ9H2D6 2365 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 TRGV5A0A0B4J1U4 118 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 TRBV9A0A0B4J1U6 114 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 A0A1B0GV50 99 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 ODAMA1E959 279 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 FAM166BA8MTA8 275 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 C9JCJ5 164 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 SIRPB1O00241 398 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 CEACAM4O75871 244 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 YIF1AO95070 293 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 IGKV1D-33P01593 117 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 IGKV1-33P01594 117 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 HBZP02008 142 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 IAPPP10997 89 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 GATA2P23769 480 aaPredicted RBP3.79□□□□□ -1.8
CDC27-215ENST00000573550 DDTP30046 118 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 IL2RGP31785 369 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 OPRK1P41145 380 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 OR3A1P47881 315 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 CDC34P49427 236 aaPredicted RBP3.79□□□□□ -1.8
CDC27-215ENST00000573550 RAB7AP51149 207 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 SPCS3P61009 180 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 RAB4BP61018 213 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 UBE2NP61088 152 aaKnown RBP3.79□□□□□ -1.8
CDC27-215ENST00000573550 RPL23P62829 140 aaKnown RBP3.79□□□□□ -1.8
CDC27-215ENST00000573550 SRYQ05066 204 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 SRSF9Q13242 221 aaKnown RBP eCLIP3.79□□□□□ -1.8
CDC27-215ENST00000573550 ADIRFQ15847 76 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 POU2AF1Q16633 256 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 TCTEX1D4Q5JR98 221 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 SPANXN5Q5MJ07 72 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 LCN15Q6UWW0 184 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 SPNS3Q6ZMD2 512 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 ACP7Q6ZNF0 438 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 SSX7Q7RTT5 188 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 H2BFWTQ7Z2G1 175 aa3.79□□□□□ -1.8
CDC27-215ENST00000573550 P4HA3Q7Z4N8 544 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms