RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 ZC4H2Q9NQZ6 224 aa12.11□□□□□ -0.47
CHD3-215ENST00000572750 K7EIM0 57 aa12.1□□□□□ -0.47
CHD3-215ENST00000572750 HOXB5P09067 269 aa12.1□□□□□ -0.47
CHD3-215ENST00000572750 ARL3P36405 182 aa12.1□□□□□ -0.47
CHD3-215ENST00000572750 C9orf66Q5T8R8 295 aa12.1□□□□□ -0.47
CHD3-215ENST00000572750 OR1L6Q8NGR2 347 aa12.1□□□□□ -0.47
CHD3-215ENST00000572750 OR52E5Q8NH55 327 aa12.1□□□□□ -0.47
CHD3-215ENST00000572750 TRBV7-1A0A0A6YYK4 115 aa12.09□□□□□ -0.47
CHD3-215ENST00000572750 PIGBOS1A0A0B4J2F0 54 aa12.09□□□□□ -0.47
CHD3-215ENST00000572750 FAM240BA0A1B0GVZ2 78 aa12.09□□□□□ -0.47
CHD3-215ENST00000572750 CEBPZOSA8MTT3 80 aa12.09□□□□□ -0.47
CHD3-215ENST00000572750 INS-IGF2F8WCM5 200 aa12.09□□□□□ -0.47
CHD3-215ENST00000572750 SAP30O75446 220 aa12.09□□□□□ -0.47
CHD3-215ENST00000572750 RNASE2P10153 161 aaKnown RBP12.09□□□□□ -0.47
CHD3-215ENST00000572750 SNCAP37840 140 aa12.09□□□□□ -0.47
CHD3-215ENST00000572750 KRTAP10-11P60412 298 aa12.09□□□□□ -0.47
CHD3-215ENST00000572750 TNFRSF9Q07011 255 aa12.09□□□□□ -0.47
CHD3-215ENST00000572750 KLF5Q13887 457 aaPredicted RBP12.09□□□□□ -0.47
CHD3-215ENST00000572750 MZT2BQ6NZ67 158 aa12.09□□□□□ -0.47
CHD3-215ENST00000572750 OR1S1Q8NH92 325 aa12.09□□□□□ -0.47
CHD3-215ENST00000572750 VN1R17PQ8TDU5 208 aa12.09□□□□□ -0.47
CHD3-215ENST00000572750 PINX1Q96BK5 328 aaKnown RBP12.09□□□□□ -0.47
CHD3-215ENST00000572750 DYNC2H1Q8NCM8 4307 aaKnown RBP12.08□□□□□ -0.48
CHD3-215ENST00000572750 DNAH9Q9NYC9 4486 aa12.08□□□□□ -0.48
CHD3-215ENST00000572750 A0A1B0GU03 582 aa12.08□□□□□ -0.48
CHD3-215ENST00000572750 ADAP1O75689 374 aa12.08□□□□□ -0.48
CHD3-215ENST00000572750 IGHV3-48P01763 117 aa12.08□□□□□ -0.48
CHD3-215ENST00000572750 FAM209BQ5JX69 171 aa12.08□□□□□ -0.48
CHD3-215ENST00000572750 GGNBP1Q5YKI7 109 aa12.08□□□□□ -0.48
CHD3-215ENST00000572750 HAPLN4Q86UW8 402 aa12.08□□□□□ -0.48
CHD3-215ENST00000572750 UBAC2Q8NBM4 344 aa12.08□□□□□ -0.48
CHD3-215ENST00000572750 COQ8AQ8NI60 647 aa12.08□□□□□ -0.48
CHD3-215ENST00000572750 ENKURQ8TC29 256 aa12.08□□□□□ -0.48
CHD3-215ENST00000572750 SCARB1Q8WTV0 552 aa12.08□□□□□ -0.48
CHD3-215ENST00000572750 HEYLQ9NQ87 328 aaPredicted RBP12.08□□□□□ -0.48
CHD3-215ENST00000572750 C21orf62Q9NYP8 219 aa12.08□□□□□ -0.48
CHD3-215ENST00000572750 HSPB7Q9UBY9 170 aa12.08□□□□□ -0.48
CHD3-215ENST00000572750 TMED3Q9Y3Q3 217 aa12.08□□□□□ -0.48
CHD3-215ENST00000572750 OR2T8A6NH00 312 aa12.07□□□□□ -0.48
CHD3-215ENST00000572750 MPTX1A8MV57 137 aa12.07□□□□□ -0.48
CHD3-215ENST00000572750 F8W735 103 aaPredicted RBP12.07□□□□□ -0.48
CHD3-215ENST00000572750 I3L2K1 104 aa12.07□□□□□ -0.48
CHD3-215ENST00000572750 GGCTO75223 188 aaKnown RBP12.07□□□□□ -0.48
CHD3-215ENST00000572750 OR2C1O95371 312 aa12.07□□□□□ -0.48
CHD3-215ENST00000572750 MT-CO2P00403 227 aa12.07□□□□□ -0.48
CHD3-215ENST00000572750 CLEC3BP05452 202 aa12.07□□□□□ -0.48
CHD3-215ENST00000572750 EGFEM1PQ0D2K5 195 aa12.07□□□□□ -0.48
CHD3-215ENST00000572750 BSXQ3C1V8 233 aa12.07□□□□□ -0.48
CHD3-215ENST00000572750 ACSM6Q6P461 480 aa12.07□□□□□ -0.48
CHD3-215ENST00000572750 OR9G4Q8NGQ1 327 aa12.07□□□□□ -0.48
CHD3-215ENST00000572750 SEC22CQ9BRL7 303 aa12.07□□□□□ -0.48
CHD3-215ENST00000572750 RBKSQ9H477 322 aa12.07□□□□□ -0.48
CHD3-215ENST00000572750 AURKAIP1Q9NWT8 199 aaPredicted RBP12.07□□□□□ -0.48
CHD3-215ENST00000572750 IGHV3-35A0A0C4DH35 117 aa12.06□□□□□ -0.48
CHD3-215ENST00000572750 TGOLN2O43493 480 aa12.06□□□□□ -0.48
CHD3-215ENST00000572750 PITX3O75364 302 aa12.06□□□□□ -0.48
CHD3-215ENST00000572750 H2AFB2P0C5Z0 115 aa12.06□□□□□ -0.48
CHD3-215ENST00000572750 Q56UQ5 140 aa12.06□□□□□ -0.48
CHD3-215ENST00000572750 SLC24A4Q8NFF2 622 aa12.06□□□□□ -0.48
CHD3-215ENST00000572750 DTD1Q8TEA8 209 aa12.06□□□□□ -0.48
CHD3-215ENST00000572750 SLC25A6P12236 298 aa12.05□□□□□ -0.48
CHD3-215ENST00000572750 EDN2P20800 178 aa12.05□□□□□ -0.48
CHD3-215ENST00000572750 HTR2BP41595 481 aa12.05□□□□□ -0.48
CHD3-215ENST00000572750 SUB1P53999 127 aaKnown RBP eCLIP12.05□□□□□ -0.48
CHD3-215ENST00000572750 PVRIGQ6DKI7 326 aa12.05□□□□□ -0.48
CHD3-215ENST00000572750 PLET1Q6UQ28 207 aa12.05□□□□□ -0.48
CHD3-215ENST00000572750 NRARPQ7Z6K4 114 aa12.05□□□□□ -0.48
CHD3-215ENST00000572750 MITD1Q8WV92 249 aa12.05□□□□□ -0.48
CHD3-215ENST00000572750 TMEM170AQ8WVE7 144 aa12.05□□□□□ -0.48
CHD3-215ENST00000572750 BSCL2Q96G97 398 aaPredicted RBP12.05□□□□□ -0.48
CHD3-215ENST00000572750 ELOVL1Q9BW60 279 aa12.05□□□□□ -0.48
CHD3-215ENST00000572750 CACFD1Q9UGQ2 172 aa12.05□□□□□ -0.48
CHD3-215ENST00000572750 IAPPP10997 89 aa12.04□□□□□ -0.48
CHD3-215ENST00000572750 NPY1RP25929 384 aa12.04□□□□□ -0.48
CHD3-215ENST00000572750 OPRK1P41145 380 aa12.04□□□□□ -0.48
CHD3-215ENST00000572750 INSL3P51460 131 aa12.04□□□□□ -0.48
CHD3-215ENST00000572750 TATDN3Q17R31 274 aa12.04□□□□□ -0.48
CHD3-215ENST00000572750 UNQ9165/PRO28630Q6UXU0 137 aa12.04□□□□□ -0.48
CHD3-215ENST00000572750 IL34Q6ZMJ4 242 aa12.04□□□□□ -0.48
CHD3-215ENST00000572750 OR4C12Q96R67 309 aa12.04□□□□□ -0.48
CHD3-215ENST00000572750 CHRDL1Q9BU40 450 aa12.04□□□□□ -0.48
CHD3-215ENST00000572750 MAGT1Q9H0U3 335 aa12.04□□□□□ -0.48
CHD3-215ENST00000572750 HIPK2Q9H2X6 1198 aa12.04□□□□□ -0.48
CHD3-215ENST00000572750 CORTO00230 105 aa12.03□□□□□ -0.48
CHD3-215ENST00000572750 CCSO14618 274 aa12.03□□□□□ -0.48
CHD3-215ENST00000572750 CSN3P07498 182 aa12.03□□□□□ -0.48
CHD3-215ENST00000572750 ADMP35318 185 aa12.03□□□□□ -0.48
CHD3-215ENST00000572750 DEFA1P59665 94 aa12.03□□□□□ -0.48
CHD3-215ENST00000572750 DEFA3P59666 94 aa12.03□□□□□ -0.48
CHD3-215ENST00000572750 C2orf83Q53S99 150 aa12.03□□□□□ -0.48
CHD3-215ENST00000572750 REC114Q7Z4M0 266 aa12.03□□□□□ -0.48
CHD3-215ENST00000572750 ZNF431Q8TF32 576 aaPredicted RBP12.03□□□□□ -0.48
CHD3-215ENST00000572750 FNDC4Q9H6D8 234 aaPredicted RBP12.03□□□□□ -0.48
CHD3-215ENST00000572750 PEMTQ9UBM1 199 aa12.03□□□□□ -0.48
CHD3-215ENST00000572750 SACSQ9NZJ4 4579 aa12.02□□□□□ -0.48
CHD3-215ENST00000572750 ZNF320A2RRD8 509 aa12.02□□□□□ -0.49
CHD3-215ENST00000572750 FAM90A26D6RGX4 464 aa12.02□□□□□ -0.49
CHD3-215ENST00000572750 IFNA10P01566 189 aa12.02□□□□□ -0.49
CHD3-215ENST00000572750 IFNA21P01568 189 aa12.02□□□□□ -0.49
CHD3-215ENST00000572750 MFAP4P55083 255 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms