RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 IGKV1D-13A0A0B4J2D9 117 aa6.92□□□□□ -1.3
CIITA-208ENST00000572665 RBMY1BA6NDE4 496 aaKnown RBP6.92□□□□□ -1.3
CIITA-208ENST00000572665 RBMY1EA6NEQ0 496 aaKnown RBP6.92□□□□□ -1.3
CIITA-208ENST00000572665 PPYP01298 95 aa6.92□□□□□ -1.3
CIITA-208ENST00000572665 RBMY1DP0C7P1 496 aaKnown RBP6.92□□□□□ -1.3
CIITA-208ENST00000572665 IGKV1-13P0DP09 117 aa6.92□□□□□ -1.3
CIITA-208ENST00000572665 HERV-K104P61576 105 aa6.92□□□□□ -1.3
CIITA-208ENST00000572665 EIF4EBP1Q13541 118 aaPredicted RBP6.92□□□□□ -1.3
CIITA-208ENST00000572665 TIMM50Q3ZCQ8 353 aa6.92□□□□□ -1.3
CIITA-208ENST00000572665 C16orf54Q6UWD8 224 aa6.92□□□□□ -1.3
CIITA-208ENST00000572665 PQLC2Q6ZP29 291 aa6.92□□□□□ -1.3
CIITA-208ENST00000572665 NR2C2APQ86WQ0 139 aa6.92□□□□□ -1.3
CIITA-208ENST00000572665 HOGA1Q86XE5 327 aa6.92□□□□□ -1.3
CIITA-208ENST00000572665 CROCCP3Q8IVE0 287 aa6.92□□□□□ -1.3
CIITA-208ENST00000572665 UXS1Q8NBZ7 420 aa6.92□□□□□ -1.3
CIITA-208ENST00000572665 NEXN-AS1Q8NBZ9 246 aa6.92□□□□□ -1.3
CIITA-208ENST00000572665 DMBX1Q8NFW5 382 aa6.92□□□□□ -1.3
CIITA-208ENST00000572665 OR1L6Q8NGR2 347 aa6.92□□□□□ -1.3
CIITA-208ENST00000572665 LGALS14Q8TCE9 139 aa6.92□□□□□ -1.3
CIITA-208ENST00000572665 RRNAD1Q96FB5 475 aaKnown RBP6.92□□□□□ -1.3
CIITA-208ENST00000572665 ATP6V0BQ99437 205 aa6.92□□□□□ -1.3
CIITA-208ENST00000572665 SLC5A7Q9GZV3 580 aa6.92□□□□□ -1.3
CIITA-208ENST00000572665 RETNQ9HD89 108 aa6.92□□□□□ -1.3
CIITA-208ENST00000572665 COMMD9Q9P000 198 aa6.92□□□□□ -1.3
CIITA-208ENST00000572665 ELF5Q9UKW6 265 aaPredicted RBP6.92□□□□□ -1.3
CIITA-208ENST00000572665 PAM16Q9Y3D7 125 aa6.92□□□□□ -1.3
CIITA-208ENST00000572665 RYR3Q15413 4870 aa6.92□□□□□ -1.3
CIITA-208ENST00000572665 IGLV11-55A0A075B6I3 123 aa6.91□□□□□ -1.3
CIITA-208ENST00000572665 TRAV18A0A075B6X5 111 aa6.91□□□□□ -1.3
CIITA-208ENST00000572665 TMEM213A2RRL7 107 aa6.91□□□□□ -1.3
CIITA-208ENST00000572665 SMIM30A4D0T7 59 aa6.91□□□□□ -1.3
CIITA-208ENST00000572665 UBE2CO00762 179 aa6.91□□□□□ -1.3
CIITA-208ENST00000572665 TNFSF12O43508 249 aa6.91□□□□□ -1.3
CIITA-208ENST00000572665 IGHV3-23P01764 117 aa6.91□□□□□ -1.3
CIITA-208ENST00000572665 HLA-AP01891 365 aaKnown RBP6.91□□□□□ -1.3
CIITA-208ENST00000572665 AREGP15514 252 aa6.91□□□□□ -1.3
CIITA-208ENST00000572665 PTBP1P26599 531 aaKnown RBP eCLIP6.91□□□□□ -1.3
CIITA-208ENST00000572665 S100GP29377 79 aa6.91□□□□□ -1.3
CIITA-208ENST00000572665 ALDH3B2P48448 385 aa6.91□□□□□ -1.3
CIITA-208ENST00000572665 POU2AF1Q16633 256 aa6.91□□□□□ -1.3
CIITA-208ENST00000572665 IDNKQ5T6J7 187 aa6.91□□□□□ -1.3
CIITA-208ENST00000572665 AADACL3Q5VUY0 350 aa6.91□□□□□ -1.3
CIITA-208ENST00000572665 SPSB3Q6PJ21 355 aa6.91□□□□□ -1.3
CIITA-208ENST00000572665 CMTM1Q8IZ96 169 aa6.91□□□□□ -1.3
CIITA-208ENST00000572665 TMEM61Q8N0U2 210 aa6.91□□□□□ -1.3
CIITA-208ENST00000572665 VN1R17PQ8TDU5 208 aa6.91□□□□□ -1.3
CIITA-208ENST00000572665 GIMAP1Q8WWP7 306 aa6.91□□□□□ -1.3
CIITA-208ENST00000572665 SPAG8Q99932 426 aaPredicted RBP6.91□□□□□ -1.3
CIITA-208ENST00000572665 C6orf62Q9GZU0 229 aaPredicted RBP6.91□□□□□ -1.3
CIITA-208ENST00000572665 C5orf66Q9H5L9 145 aa6.91□□□□□ -1.3
CIITA-208ENST00000572665 IFT46Q9NQC8 304 aa6.91□□□□□ -1.3
CIITA-208ENST00000572665 CCL28Q9NRJ3 127 aa6.91□□□□□ -1.3
CIITA-208ENST00000572665 TP53TG1Q9Y2A0 90 aa6.91□□□□□ -1.3
CIITA-208ENST00000572665 TENM2Q9NT68 2774 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 NUPR2A6NF83 97 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 E7EUB6 86 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 SULT1C2O00338 296 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 UPK2O00526 184 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 VCYO14598 125 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 SSX5O60225 188 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 SNAPC5O75971 98 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 REG1AP05451 166 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 TRAPPC2P0DI81 140 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 TRAPPC2BP0DI82 140 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 GPR183P32249 361 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 SDC2P34741 201 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 BMI1P35226 326 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 AMTP48728 403 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 CMC4P56277 68 aaPredicted RBP6.9□□□□□ -1.3
CIITA-208ENST00000572665 FXYD4P59646 89 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 OR2B8PP59922 312 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 MXD1Q05195 221 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 ZNF585BQ52M93 769 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 BTNL8Q6UX41 500 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 PRR26Q8N8Z3 221 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 OR5AP2Q8NGF4 316 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 OR1L8Q8NGR8 309 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 CACNG8Q8WXS5 425 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 S100A16Q96FQ6 103 aaKnown RBP6.9□□□□□ -1.3
CIITA-208ENST00000572665 BSCL2Q96G97 398 aaPredicted RBP6.9□□□□□ -1.3
CIITA-208ENST00000572665 TMEM56Q96MV1 263 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 FUNDC2Q9BWH2 189 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 ZNF436Q9C0F3 470 aaPredicted RBP6.9□□□□□ -1.3
CIITA-208ENST00000572665 RNF167Q9H6Y7 350 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 DAZ1Q9NQZ3 744 aaKnown RBP6.9□□□□□ -1.3
CIITA-208ENST00000572665 FKBP11Q9NYL4 201 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 MLXQ9UH92 298 aa6.9□□□□□ -1.3
CIITA-208ENST00000572665 HUWE1Q7Z6Z7 4374 aaKnown RBP6.9□□□□□ -1.31
CIITA-208ENST00000572665 LOC100506127A0A0U1RQW1 187 aa6.89□□□□□ -1.31
CIITA-208ENST00000572665 OR4C46A6NHA9 309 aa6.89□□□□□ -1.31
CIITA-208ENST00000572665 TGOLN2O43493 480 aa6.89□□□□□ -1.31
CIITA-208ENST00000572665 GABARAPO95166 117 aa6.89□□□□□ -1.31
CIITA-208ENST00000572665 C8orf88P0DMB2 117 aa6.89□□□□□ -1.31
CIITA-208ENST00000572665 TAS2R46P59540 309 aa6.89□□□□□ -1.31
CIITA-208ENST00000572665 SLC25A24Q6NUK1 477 aa6.89□□□□□ -1.31
CIITA-208ENST00000572665 TMEM17Q86X19 198 aa6.89□□□□□ -1.31
CIITA-208ENST00000572665 GDPD1Q8N9F7 314 aa6.89□□□□□ -1.31
CIITA-208ENST00000572665 OR51H1Q8NH63 302 aa6.89□□□□□ -1.31
CIITA-208ENST00000572665 ZNF502Q8TBZ5 544 aa6.89□□□□□ -1.31
CIITA-208ENST00000572665 LSM10Q969L4 123 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms