RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 MRPL36Q9P0J6 103 aaKnown RBP13.37□□□□□ -0.27
CHD3-214ENST00000572579 FAM25AB3EWG3 89 aa13.36□□□□□ -0.27
CHD3-214ENST00000572579 FAM25CB3EWG5 89 aa13.36□□□□□ -0.27
CHD3-214ENST00000572579 FAM25GB3EWG6 89 aa13.36□□□□□ -0.27
CHD3-214ENST00000572579 SPRY2O43597 315 aa13.36□□□□□ -0.27
CHD3-214ENST00000572579 MLANAQ16655 118 aa13.36□□□□□ -0.27
CHD3-214ENST00000572579 DEFB135Q30KP9 77 aa13.36□□□□□ -0.27
CHD3-214ENST00000572579 LAMTOR1Q6IAA8 161 aa13.36□□□□□ -0.27
CHD3-214ENST00000572579 Q6ZRM9 215 aa13.36□□□□□ -0.27
CHD3-214ENST00000572579 TMEM116Q8NCL8 245 aa13.36□□□□□ -0.27
CHD3-214ENST00000572579 TXN2Q99757 166 aa13.36□□□□□ -0.27
CHD3-214ENST00000572579 NUPL2O15504 423 aaKnown RBP13.35□□□□□ -0.27
CHD3-214ENST00000572579 ST8SIA3O43173 380 aa13.35□□□□□ -0.27
CHD3-214ENST00000572579 CD74P04233 296 aa13.35□□□□□ -0.27
CHD3-214ENST00000572579 ZNF182P17025 639 aaPredicted RBP13.35□□□□□ -0.27
CHD3-214ENST00000572579 GPR107Q5VW38 600 aa13.35□□□□□ -0.27
CHD3-214ENST00000572579 TOMM20LQ6UXN7 152 aa13.35□□□□□ -0.27
CHD3-214ENST00000572579 LYG2Q86SG7 212 aa13.35□□□□□ -0.27
CHD3-214ENST00000572579 RNF183Q96D59 192 aa13.35□□□□□ -0.27
CHD3-214ENST00000572579 MAP6D1Q9H9H5 199 aa13.35□□□□□ -0.27
CHD3-214ENST00000572579 EXTL2Q9UBQ6 330 aa13.35□□□□□ -0.27
CHD3-214ENST00000572579 TP53TG1Q9Y2A0 90 aa13.35□□□□□ -0.27
CHD3-214ENST00000572579 INS-IGF2F8WCM5 200 aa13.34□□□□□ -0.27
CHD3-214ENST00000572579 YIF1AO95070 293 aa13.34□□□□□ -0.27
CHD3-214ENST00000572579 PGAM2P15259 253 aa13.34□□□□□ -0.27
CHD3-214ENST00000572579 S100GP29377 79 aa13.34□□□□□ -0.27
CHD3-214ENST00000572579 ETV6P41212 452 aa13.34□□□□□ -0.27
CHD3-214ENST00000572579 RELQ04864 619 aaPredicted RBP13.34□□□□□ -0.27
CHD3-214ENST00000572579 TNFRSF9Q07011 255 aa13.34□□□□□ -0.27
CHD3-214ENST00000572579 RNASE10Q5GAN6 216 aaKnown RBP13.34□□□□□ -0.27
CHD3-214ENST00000572579 PINX1Q96BK5 328 aaKnown RBP13.34□□□□□ -0.27
CHD3-214ENST00000572579 IGKV3-7A0A075B6H7 116 aa13.33□□□□□ -0.28
CHD3-214ENST00000572579 TRAV14DV4A0A0A6YYC5 116 aa13.33□□□□□ -0.28
CHD3-214ENST00000572579 KIR2DL5BA0A0G2JN68 375 aa13.33□□□□□ -0.28
CHD3-214ENST00000572579 KIR2DL5BA0A0G2JPC4 375 aa13.33□□□□□ -0.28
CHD3-214ENST00000572579 C3orf85A0A1B0GTC6 90 aa13.33□□□□□ -0.28
CHD3-214ENST00000572579 A0A1B0GU03 582 aa13.33□□□□□ -0.28
CHD3-214ENST00000572579 OR4C46A6NHA9 309 aa13.33□□□□□ -0.28
CHD3-214ENST00000572579 CTDSP2O14595 271 aa13.33□□□□□ -0.28
CHD3-214ENST00000572579 JTBO76095 146 aa13.33□□□□□ -0.28
CHD3-214ENST00000572579 RNASE2P10153 161 aaKnown RBP13.33□□□□□ -0.28
CHD3-214ENST00000572579 TFPI2P48307 235 aa13.33□□□□□ -0.28
CHD3-214ENST00000572579 APOC4P55056 127 aa13.33□□□□□ -0.28
CHD3-214ENST00000572579 ERHP84090 104 aaKnown RBP13.33□□□□□ -0.28
CHD3-214ENST00000572579 MZT2AQ6P582 158 aa13.33□□□□□ -0.28
CHD3-214ENST00000572579 KIR2DL5AQ8N109 375 aa13.33□□□□□ -0.28
CHD3-214ENST00000572579 GBGT1Q8N5D6 347 aa13.33□□□□□ -0.28
CHD3-214ENST00000572579 ARRDC1Q8N5I2 433 aa13.33□□□□□ -0.28
CHD3-214ENST00000572579 OR13C8Q8NGS7 320 aa13.33□□□□□ -0.28
CHD3-214ENST00000572579 KIR2DL5BQ8NHK3 375 aa13.33□□□□□ -0.28
CHD3-214ENST00000572579 TERB2Q8NHR7 220 aa13.33□□□□□ -0.28
CHD3-214ENST00000572579 ST8SIA2Q92186 375 aa13.33□□□□□ -0.28
CHD3-214ENST00000572579 ZNF486Q96H40 463 aaPredicted RBP13.33□□□□□ -0.28
CHD3-214ENST00000572579 FNDC4Q9H6D8 234 aaPredicted RBP13.33□□□□□ -0.28
CHD3-214ENST00000572579 ZFAND3Q9H8U3 227 aa13.33□□□□□ -0.28
CHD3-214ENST00000572579 FRAS1Q86XX4 4008 aa13.33□□□□□ -0.28
CHD3-214ENST00000572579 UBE2CO00762 179 aa13.32□□□□□ -0.28
CHD3-214ENST00000572579 TMEM50AO95807 157 aa13.32□□□□□ -0.28
CHD3-214ENST00000572579 BMI1P35226 326 aa13.32□□□□□ -0.28
CHD3-214ENST00000572579 ALDH3B2P48448 385 aa13.32□□□□□ -0.28
CHD3-214ENST00000572579 PPP5CP53041 499 aa13.32□□□□□ -0.28
CHD3-214ENST00000572579 SPCS2Q15005 226 aa13.32□□□□□ -0.28
CHD3-214ENST00000572579 FAAP20Q6NZ36 180 aa13.32□□□□□ -0.28
CHD3-214ENST00000572579 TMEM229BQ8NBD8 167 aa13.32□□□□□ -0.28
CHD3-214ENST00000572579 LHFPL5Q8TAF8 219 aa13.32□□□□□ -0.28
CHD3-214ENST00000572579 RTBDNQ9BSG5 229 aaPredicted RBP13.32□□□□□ -0.28
CHD3-214ENST00000572579 VSIRQ9H7M9 311 aa13.32□□□□□ -0.28
CHD3-214ENST00000572579 IGHV3-66A0A0C4DH42 116 aa13.31□□□□□ -0.28
CHD3-214ENST00000572579 GNG7O60262 68 aa13.31□□□□□ -0.28
CHD3-214ENST00000572579 UCP1P25874 307 aa13.31□□□□□ -0.28
CHD3-214ENST00000572579 PMS2P11Q13670 270 aa13.31□□□□□ -0.28
CHD3-214ENST00000572579 FAM24BQ8N5W8 94 aa13.31□□□□□ -0.28
CHD3-214ENST00000572579 STPG3Q8N7X2 389 aa13.31□□□□□ -0.28
CHD3-214ENST00000572579 MARCH1Q8TCQ1 289 aa13.31□□□□□ -0.28
CHD3-214ENST00000572579 GALNT14Q96FL9 552 aa13.31□□□□□ -0.28
CHD3-214ENST00000572579 DNAH10Q8IVF4 4471 aa13.31□□□□□ -0.28
CHD3-214ENST00000572579 VPS13DQ5THJ4 4388 aa13.31□□□□□ -0.28
CHD3-214ENST00000572579 DFFBO76075 338 aa13.3□□□□□ -0.28
CHD3-214ENST00000572579 TBPP20226 339 aa13.3□□□□□ -0.28
CHD3-214ENST00000572579 BSXQ3C1V8 233 aa13.3□□□□□ -0.28
CHD3-214ENST00000572579 AP3S1Q92572 193 aa13.3□□□□□ -0.28
CHD3-214ENST00000572579 PUS1Q9Y606 427 aaKnown RBP eCLIP13.3□□□□□ -0.28
CHD3-214ENST00000572579 RAB3DO95716 219 aa13.29□□□□□ -0.28
CHD3-214ENST00000572579 IFNA17P01571 189 aa13.29□□□□□ -0.28
CHD3-214ENST00000572579 AARDQ4LEZ3 155 aa13.29□□□□□ -0.28
CHD3-214ENST00000572579 STEAP1BQ6NZ63 245 aa13.29□□□□□ -0.28
CHD3-214ENST00000572579 TCF24Q7RTU0 167 aa13.29□□□□□ -0.28
CHD3-214ENST00000572579 DUSP18Q8NEJ0 188 aa13.29□□□□□ -0.28
CHD3-214ENST00000572579 GLYATL2Q8WU03 294 aa13.29□□□□□ -0.28
CHD3-214ENST00000572579 LINC00476Q8WZB0 136 aa13.29□□□□□ -0.28
CHD3-214ENST00000572579 CXorf65A6NEN9 183 aa13.28□□□□□ -0.28
CHD3-214ENST00000572579 GABARAPH6UMI1 98 aa13.28□□□□□ -0.28
CHD3-214ENST00000572579 CDS2O95674 445 aa13.28□□□□□ -0.28
CHD3-214ENST00000572579 IGKV1-17P01599 117 aa13.28□□□□□ -0.28
CHD3-214ENST00000572579 SNCAP37840 140 aa13.28□□□□□ -0.28
CHD3-214ENST00000572579 NPBWR1P48145 328 aa13.28□□□□□ -0.28
CHD3-214ENST00000572579 AKR1C2P52895 323 aa13.28□□□□□ -0.28
CHD3-214ENST00000572579 TAS2R19P59542 299 aa13.28□□□□□ -0.28
CHD3-214ENST00000572579 TRIM16LQ309B1 348 aa13.28□□□□□ -0.28
CHD3-214ENST00000572579 SCGB2B2Q4G0G5 96 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms