RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 EHFQ9NZC4 300 aa13.86□□□□□ -0.19
NUP88-203ENST00000572019 KNCNA6PVL3 124 aa13.85□□□□□ -0.19
NUP88-203ENST00000572019 ST8SIA3O43173 380 aa13.85□□□□□ -0.19
NUP88-203ENST00000572019 SNAPC5O75971 98 aa13.85□□□□□ -0.19
NUP88-203ENST00000572019 PSMB9P28065 219 aa13.85□□□□□ -0.19
NUP88-203ENST00000572019 HERV-K104P61576 105 aa13.85□□□□□ -0.19
NUP88-203ENST00000572019 IDNKQ5T6J7 187 aa13.85□□□□□ -0.19
NUP88-203ENST00000572019 UBE2UQ5VVX9 321 aa13.85□□□□□ -0.19
NUP88-203ENST00000572019 TRPT1Q86TN4 253 aaKnown RBP13.85□□□□□ -0.19
NUP88-203ENST00000572019 TPRA1Q86W33 373 aa13.85□□□□□ -0.19
NUP88-203ENST00000572019 PINX1Q96BK5 328 aaKnown RBP13.85□□□□□ -0.19
NUP88-203ENST00000572019 MOB3AQ96BX8 217 aa13.85□□□□□ -0.19
NUP88-203ENST00000572019 ZNF2Q9BSG1 426 aaPredicted RBP13.85□□□□□ -0.19
NUP88-203ENST00000572019 CLEC5AQ9NY25 188 aa13.85□□□□□ -0.19
NUP88-203ENST00000572019 A0A1B0GU03 582 aa13.84□□□□□ -0.19
NUP88-203ENST00000572019 M0R2N4 97 aa13.84□□□□□ -0.19
NUP88-203ENST00000572019 TMEM56Q96MV1 263 aa13.84□□□□□ -0.19
NUP88-203ENST00000572019 PRNDQ9UKY0 176 aa13.84□□□□□ -0.19
NUP88-203ENST00000572019 TRAV10A0A0B4J240 114 aa13.83□□□□□ -0.2
NUP88-203ENST00000572019 PRSS29PA6NIE9 313 aa13.83□□□□□ -0.2
NUP88-203ENST00000572019 ZNF705EA8MWA4 302 aaPredicted RBP13.83□□□□□ -0.2
NUP88-203ENST00000572019 DNASE2O00115 360 aaPredicted RBP13.83□□□□□ -0.2
NUP88-203ENST00000572019 GNG7O60262 68 aa13.83□□□□□ -0.2
NUP88-203ENST00000572019 IGKV1-39P01597 117 aa13.83□□□□□ -0.2
NUP88-203ENST00000572019 PMP2P02689 132 aa13.83□□□□□ -0.2
NUP88-203ENST00000572019 IGKV1D-39P04432 117 aa13.83□□□□□ -0.2
NUP88-203ENST00000572019 PAFAH1B2P68402 229 aa13.83□□□□□ -0.2
NUP88-203ENST00000572019 IZUMO4Q1ZYL8 232 aa13.83□□□□□ -0.2
NUP88-203ENST00000572019 SPINK9Q5DT21 86 aa13.83□□□□□ -0.2
NUP88-203ENST00000572019 DHRS11Q6UWP2 260 aa13.83□□□□□ -0.2
NUP88-203ENST00000572019 STHQ8IWL8 128 aa13.83□□□□□ -0.2
NUP88-203ENST00000572019 CADM3Q8N126 398 aa13.83□□□□□ -0.2
NUP88-203ENST00000572019 PUS1Q9Y606 427 aaKnown RBP eCLIP13.83□□□□□ -0.2
NUP88-203ENST00000572019 RPL11P62913 178 aaKnown RBP13.82□□□□□ -0.2
NUP88-203ENST00000572019 C12orf74Q32Q52 190 aa13.82□□□□□ -0.2
NUP88-203ENST00000572019 PHLDA2Q53GA4 152 aa13.82□□□□□ -0.2
NUP88-203ENST00000572019 IZUMO2Q6UXV1 221 aa13.82□□□□□ -0.2
NUP88-203ENST00000572019 SPARTQ8N0X7 666 aa13.82□□□□□ -0.2
NUP88-203ENST00000572019 ZNF114Q8NC26 417 aa13.82□□□□□ -0.2
NUP88-203ENST00000572019 CSNK1G2-AS1Q8NCQ2 148 aa13.82□□□□□ -0.2
NUP88-203ENST00000572019 TXN2Q99757 166 aa13.82□□□□□ -0.2
NUP88-203ENST00000572019 MRPL36Q9P0J6 103 aaKnown RBP13.82□□□□□ -0.2
NUP88-203ENST00000572019 RABAC1Q9UI14 185 aa13.82□□□□□ -0.2
NUP88-203ENST00000572019 K7EQG2 157 aa13.81□□□□□ -0.2
NUP88-203ENST00000572019 SEC22AQ96IW7 307 aa13.81□□□□□ -0.2
NUP88-203ENST00000572019 BLOC1S6Q9UL45 172 aa13.81□□□□□ -0.2
NUP88-203ENST00000572019 ANAPC10Q9UM13 185 aa13.81□□□□□ -0.2
NUP88-203ENST00000572019 SSR3Q9UNL2 185 aa13.81□□□□□ -0.2
NUP88-203ENST00000572019 ZNF688P0C7X2 276 aa13.8□□□□□ -0.2
NUP88-203ENST00000572019 MIFP14174 115 aa13.8□□□□□ -0.2
NUP88-203ENST00000572019 PRCDQ00LT1 54 aa13.8□□□□□ -0.2
NUP88-203ENST00000572019 PVRIGQ6DKI7 326 aa13.8□□□□□ -0.2
NUP88-203ENST00000572019 TSPAN14Q8NG11 270 aa13.8□□□□□ -0.2
NUP88-203ENST00000572019 GINS3Q9BRX5 216 aa13.8□□□□□ -0.2
NUP88-203ENST00000572019 RNF126Q9BV68 326 aa13.8□□□□□ -0.2
NUP88-203ENST00000572019 IFT46Q9NQC8 304 aa13.8□□□□□ -0.2
NUP88-203ENST00000572019 NACAE9PAV3 2078 aa13.79□□□□□ -0.2
NUP88-203ENST00000572019 HSPG2P98160 4391 aa13.79□□□□□ -0.2
NUP88-203ENST00000572019 A0A0A6YYH2 397 aa13.79□□□□□ -0.2
NUP88-203ENST00000572019 TRAV2A0A0B4J234 112 aa13.79□□□□□ -0.2
NUP88-203ENST00000572019 A6NJ64 397 aa13.79□□□□□ -0.2
NUP88-203ENST00000572019 GPR31O00270 319 aa13.79□□□□□ -0.2
NUP88-203ENST00000572019 AMBPP02760 352 aa13.79□□□□□ -0.2
NUP88-203ENST00000572019 EIF4EP06730 217 aaKnown RBP13.79□□□□□ -0.2
NUP88-203ENST00000572019 PPP5CP53041 499 aa13.79□□□□□ -0.2
NUP88-203ENST00000572019 ZNF575Q86XF7 245 aa13.79□□□□□ -0.2
NUP88-203ENST00000572019 POM121L12Q8N7R1 296 aa13.79□□□□□ -0.2
NUP88-203ENST00000572019 DUSP18Q8NEJ0 188 aa13.79□□□□□ -0.2
NUP88-203ENST00000572019 STXBP6Q8NFX7 210 aa13.79□□□□□ -0.2
NUP88-203ENST00000572019 FKBP11Q9NYL4 201 aa13.79□□□□□ -0.2
NUP88-203ENST00000572019 DEFB131BA0A096LNP1 70 aa13.78□□□□□ -0.2
NUP88-203ENST00000572019 TGFBR1P36897 503 aa13.78□□□□□ -0.2
NUP88-203ENST00000572019 CBX5P45973 191 aa13.78□□□□□ -0.2
NUP88-203ENST00000572019 SCAND1P57086 179 aa13.78□□□□□ -0.2
NUP88-203ENST00000572019 GABARAPL2P60520 117 aa13.78□□□□□ -0.2
NUP88-203ENST00000572019 ZNF600Q6ZNG1 722 aa13.78□□□□□ -0.2
NUP88-203ENST00000572019 MRGPRFQ96AM1 343 aa13.78□□□□□ -0.2
NUP88-203ENST00000572019 DIABLOQ9NR28 239 aa13.78□□□□□ -0.2
NUP88-203ENST00000572019 LOC100506127A0A0U1RQW1 187 aa13.77□□□□□ -0.21
NUP88-203ENST00000572019 TMEM50AO95807 157 aa13.77□□□□□ -0.21
NUP88-203ENST00000572019 MLANAQ16655 118 aa13.77□□□□□ -0.21
NUP88-203ENST00000572019 ACTL10Q5JWF8 245 aa13.77□□□□□ -0.21
NUP88-203ENST00000572019 TBC1D26Q86UD7 250 aa13.77□□□□□ -0.21
NUP88-203ENST00000572019 LYSMD2Q8IV50 215 aa13.77□□□□□ -0.21
NUP88-203ENST00000572019 DCANP1Q8TF63 244 aa13.77□□□□□ -0.21
NUP88-203ENST00000572019 BORCS5Q969J3 196 aa13.77□□□□□ -0.21
NUP88-203ENST00000572019 TBC1D24Q9ULP9 559 aa13.77□□□□□ -0.21
NUP88-203ENST00000572019 CD5P06127 495 aa13.76□□□□□ -0.21
NUP88-203ENST00000572019 SPP1P10451 314 aa13.76□□□□□ -0.21
NUP88-203ENST00000572019 NAT1P18440 290 aa13.76□□□□□ -0.21
NUP88-203ENST00000572019 HSPA13P48723 471 aa13.76□□□□□ -0.21
NUP88-203ENST00000572019 H2BFWTQ7Z2G1 175 aa13.76□□□□□ -0.21
NUP88-203ENST00000572019 CMTM1Q8IZ96 169 aa13.76□□□□□ -0.21
NUP88-203ENST00000572019 OR5H2Q8NGV7 314 aa13.76□□□□□ -0.21
NUP88-203ENST00000572019 OR4A16Q8NH70 328 aa13.76□□□□□ -0.21
NUP88-203ENST00000572019 TSC22D3Q99576 134 aa13.76□□□□□ -0.21
NUP88-203ENST00000572019 FNDC4Q9H6D8 234 aaPredicted RBP13.76□□□□□ -0.21
NUP88-203ENST00000572019 IGLV2-18A0A075B6J9 118 aa13.75□□□□□ -0.21
NUP88-203ENST00000572019 HRH1P35367 487 aa13.75□□□□□ -0.21
NUP88-203ENST00000572019 P2RY1P47900 373 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms