RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 LCN12Q6JVE5 192 aa9.6□□□□□ -0.87
TVP23B-204ENST00000571018 SPSB3Q6PJ21 355 aa9.6□□□□□ -0.87
TVP23B-204ENST00000571018 Q8N1Y9 231 aa9.6□□□□□ -0.87
TVP23B-204ENST00000571018 SLC35G3Q8N808 338 aa9.6□□□□□ -0.87
TVP23B-204ENST00000571018 IL22RA2Q969J5 263 aa9.6□□□□□ -0.87
TVP23B-204ENST00000571018 BSCL2Q96G97 398 aaPredicted RBP9.6□□□□□ -0.87
TVP23B-204ENST00000571018 ZC4H2Q9NQZ6 224 aa9.6□□□□□ -0.87
TVP23B-204ENST00000571018 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.6□□□□□ -0.87
TVP23B-204ENST00000571018 IGHV3-21A0A0B4J1V1 117 aa9.59□□□□□ -0.87
TVP23B-204ENST00000571018 TMEM213A2RRL7 107 aa9.59□□□□□ -0.87
TVP23B-204ENST00000571018 IZUMO1RA6ND01 250 aa9.59□□□□□ -0.87
TVP23B-204ENST00000571018 I3L2K1 104 aa9.59□□□□□ -0.87
TVP23B-204ENST00000571018 AKR1C4P17516 323 aa9.59□□□□□ -0.87
TVP23B-204ENST00000571018 EDN2P20800 178 aa9.59□□□□□ -0.87
TVP23B-204ENST00000571018 SNCAP37840 140 aa9.59□□□□□ -0.87
TVP23B-204ENST00000571018 SUPT4H1P63272 117 aaKnown RBP9.59□□□□□ -0.87
TVP23B-204ENST00000571018 DEFB114Q30KQ6 69 aa9.59□□□□□ -0.87
TVP23B-204ENST00000571018 UNQ9165/PRO28630Q6UXU0 137 aa9.59□□□□□ -0.87
TVP23B-204ENST00000571018 OR52E5Q8NH55 327 aa9.59□□□□□ -0.87
TVP23B-204ENST00000571018 DYNLRB2Q8TF09 96 aa9.59□□□□□ -0.87
TVP23B-204ENST00000571018 GPR146Q96CH1 333 aa9.59□□□□□ -0.87
TVP23B-204ENST00000571018 MISP3Q96FF7 219 aa9.59□□□□□ -0.87
TVP23B-204ENST00000571018 SLC25A21Q9BQT8 299 aaPredicted RBP9.59□□□□□ -0.87
TVP23B-204ENST00000571018 ZNF436Q9C0F3 470 aaPredicted RBP9.59□□□□□ -0.87
TVP23B-204ENST00000571018 GAR1Q9NY12 217 aaKnown RBP9.59□□□□□ -0.87
TVP23B-204ENST00000571018 TGP01266 2768 aa9.58□□□□□ -0.88
TVP23B-204ENST00000571018 OR2T8A6NH00 312 aa9.58□□□□□ -0.88
TVP23B-204ENST00000571018 MT-CO2P00403 227 aa9.58□□□□□ -0.88
TVP23B-204ENST00000571018 NHLRC4P0CG21 123 aaPredicted RBP9.58□□□□□ -0.88
TVP23B-204ENST00000571018 FCGR2BP31994 310 aaPredicted RBP9.58□□□□□ -0.88
TVP23B-204ENST00000571018 ADMP35318 185 aa9.58□□□□□ -0.88
TVP23B-204ENST00000571018 MFAP4P55083 255 aa9.58□□□□□ -0.88
TVP23B-204ENST00000571018 ELLP55199 621 aaPredicted RBP9.58□□□□□ -0.88
TVP23B-204ENST00000571018 SPCS3P61009 180 aa9.58□□□□□ -0.88
TVP23B-204ENST00000571018 BAK1Q16611 211 aa9.58□□□□□ -0.88
TVP23B-204ENST00000571018 CD300EQ496F6 205 aaPredicted RBP9.58□□□□□ -0.88
TVP23B-204ENST00000571018 Q56UQ5 140 aa9.58□□□□□ -0.88
TVP23B-204ENST00000571018 TMEM128Q5BJH2 165 aa9.58□□□□□ -0.88
TVP23B-204ENST00000571018 ZNF57Q68EA5 555 aaPredicted RBP9.58□□□□□ -0.88
TVP23B-204ENST00000571018 PVRIGQ6DKI7 326 aa9.58□□□□□ -0.88
TVP23B-204ENST00000571018 UBAC2Q8NBM4 344 aa9.58□□□□□ -0.88
TVP23B-204ENST00000571018 TXN2Q99757 166 aa9.58□□□□□ -0.88
TVP23B-204ENST00000571018 CHRDL1Q9BU40 450 aa9.58□□□□□ -0.88
TVP23B-204ENST00000571018 PALMDQ9NP74 551 aa9.58□□□□□ -0.88
TVP23B-204ENST00000571018 TECRQ9NZ01 308 aaKnown RBP9.58□□□□□ -0.88
TVP23B-204ENST00000571018 PRR13Q9NZ81 148 aa9.58□□□□□ -0.88
TVP23B-204ENST00000571018 CACNG5Q9UF02 275 aa9.58□□□□□ -0.88
TVP23B-204ENST00000571018 A0A0B4J2A0 478 aa9.57□□□□□ -0.88
TVP23B-204ENST00000571018 IGHV3-35A0A0C4DH35 117 aa9.57□□□□□ -0.88
TVP23B-204ENST00000571018 ZNF785A8K8V0 405 aa9.57□□□□□ -0.88
TVP23B-204ENST00000571018 CTSGP08311 255 aa9.57□□□□□ -0.88
TVP23B-204ENST00000571018 C8orf88P0DMB2 117 aa9.57□□□□□ -0.88
TVP23B-204ENST00000571018 RNASE2P10153 161 aaKnown RBP9.57□□□□□ -0.88
TVP23B-204ENST00000571018 ANXA3P12429 323 aa9.57□□□□□ -0.88
TVP23B-204ENST00000571018 HOXA1P49639 335 aaPredicted RBP9.57□□□□□ -0.88
TVP23B-204ENST00000571018 SUB1P53999 127 aaKnown RBP eCLIP9.57□□□□□ -0.88
TVP23B-204ENST00000571018 SRPXP78539 464 aa9.57□□□□□ -0.88
TVP23B-204ENST00000571018 TM4SF20Q53R12 229 aa9.57□□□□□ -0.88
TVP23B-204ENST00000571018 C11orf87Q6NUJ2 197 aa9.57□□□□□ -0.88
TVP23B-204ENST00000571018 TMED4Q7Z7H5 227 aa9.57□□□□□ -0.88
TVP23B-204ENST00000571018 LGI3Q8N145 548 aa9.57□□□□□ -0.88
TVP23B-204ENST00000571018 UXS1Q8NBZ7 420 aa9.57□□□□□ -0.88
TVP23B-204ENST00000571018 CACNG8Q8WXS5 425 aa9.57□□□□□ -0.88
TVP23B-204ENST00000571018 TMEM190Q8WZ59 177 aa9.57□□□□□ -0.88
TVP23B-204ENST00000571018 MARC2Q969Z3 335 aa9.57□□□□□ -0.88
TVP23B-204ENST00000571018 PINX1Q96BK5 328 aaKnown RBP9.57□□□□□ -0.88
TVP23B-204ENST00000571018 SDHCQ99643 169 aaPredicted RBP9.57□□□□□ -0.88
TVP23B-204ENST00000571018 ENY2Q9NPA8 101 aa9.57□□□□□ -0.88
TVP23B-204ENST00000571018 MRPL27Q9P0M9 148 aaKnown RBP9.57□□□□□ -0.88
TVP23B-204ENST00000571018 CACFD1Q9UGQ2 172 aa9.57□□□□□ -0.88
TVP23B-204ENST00000571018 SHPKQ9UHJ6 478 aa9.57□□□□□ -0.88
TVP23B-204ENST00000571018 UFC1Q9Y3C8 167 aa9.57□□□□□ -0.88
TVP23B-204ENST00000571018 SORL1Q92673 2214 aa9.57□□□□□ -0.88
TVP23B-204ENST00000571018 PIGBOS1A0A0B4J2F0 54 aa9.56□□□□□ -0.88
TVP23B-204ENST00000571018 A8MZ25 164 aa9.56□□□□□ -0.88
TVP23B-204ENST00000571018 CORTO00230 105 aa9.56□□□□□ -0.88
TVP23B-204ENST00000571018 NDUFA4O00483 81 aa9.56□□□□□ -0.88
TVP23B-204ENST00000571018 FRMD6-AS1P0C7T7 363 aa9.56□□□□□ -0.88
TVP23B-204ENST00000571018 INPP1P49441 399 aa9.56□□□□□ -0.88
TVP23B-204ENST00000571018 BSXQ3C1V8 233 aa9.56□□□□□ -0.88
TVP23B-204ENST00000571018 NMSQ5H8A3 153 aa9.56□□□□□ -0.88
TVP23B-204ENST00000571018 TRIQKQ629K1 86 aa9.56□□□□□ -0.88
TVP23B-204ENST00000571018 LYZL2Q7Z4W2 148 aa9.56□□□□□ -0.88
TVP23B-204ENST00000571018 GTSCR1Q86UQ5 136 aa9.56□□□□□ -0.88
TVP23B-204ENST00000571018 MLXQ9UH92 298 aa9.56□□□□□ -0.88
TVP23B-204ENST00000571018 NAP1L6A6NFF2 107 aa9.55□□□□□ -0.88
TVP23B-204ENST00000571018 EREGO14944 169 aa9.55□□□□□ -0.88
TVP23B-204ENST00000571018 NUPL2O15504 423 aaKnown RBP9.55□□□□□ -0.88
TVP23B-204ENST00000571018 GHRHP01286 108 aa9.55□□□□□ -0.88
TVP23B-204ENST00000571018 IGHV3-48P01763 117 aa9.55□□□□□ -0.88
TVP23B-204ENST00000571018 SULT1A3P0DMM9 295 aa9.55□□□□□ -0.88
TVP23B-204ENST00000571018 SULT1A4P0DMN0 295 aa9.55□□□□□ -0.88
TVP23B-204ENST00000571018 IGHV4-30-4P0DP06 118 aa9.55□□□□□ -0.88
TVP23B-204ENST00000571018 CCR6P51684 374 aa9.55□□□□□ -0.88
TVP23B-204ENST00000571018 RBMS2Q15434 407 aaKnown RBP9.55□□□□□ -0.88
TVP23B-204ENST00000571018 ZNF414Q96IQ9 312 aa9.55□□□□□ -0.88
TVP23B-204ENST00000571018 ASCL2Q99929 193 aa9.55□□□□□ -0.88
TVP23B-204ENST00000571018 DAZ1Q9NQZ3 744 aaKnown RBP9.55□□□□□ -0.88
TVP23B-204ENST00000571018 C19orf73Q9NVV2 129 aa9.55□□□□□ -0.88
TVP23B-204ENST00000571018 DUXBA0A1W2PPF3 345 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms