RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 TMEM242Q9NWH2 141 aa15.9■□□□□ 0.14
SPNS2-203ENST00000570979 WASHC3Q9Y3C0 194 aa15.9■□□□□ 0.14
SPNS2-203ENST00000570979 SETD2Q9BYW2 2564 aaPredicted RBP15.9■□□□□ 0.14
SPNS2-203ENST00000570979 ZFHX3Q15911 3703 aa15.9■□□□□ 0.14
SPNS2-203ENST00000570979 H0YJW9 148 aa15.9■□□□□ 0.14
SPNS2-203ENST00000570979 RRHO14718 337 aa15.9■□□□□ 0.14
SPNS2-203ENST00000570979 RD3LP0DJH9 198 aa15.9■□□□□ 0.14
SPNS2-203ENST00000570979 CEBPGP53567 150 aa15.9■□□□□ 0.14
SPNS2-203ENST00000570979 C2orf83Q53S99 150 aa15.9■□□□□ 0.14
SPNS2-203ENST00000570979 ABHD12Q8N2K0 398 aa15.9■□□□□ 0.14
SPNS2-203ENST00000570979 RNASEH2CQ8TDP1 164 aaKnown RBP15.9■□□□□ 0.14
SPNS2-203ENST00000570979 NEUROG1Q92886 237 aa15.9■□□□□ 0.14
SPNS2-203ENST00000570979 TIMD4Q96H15 378 aa15.9■□□□□ 0.14
SPNS2-203ENST00000570979 HARBI1Q96MB7 349 aa15.9■□□□□ 0.14
SPNS2-203ENST00000570979 IGHV1-8P0DP01 117 aa15.89■□□□□ 0.13
SPNS2-203ENST00000570979 FGF8P55075 233 aaPredicted RBP15.89■□□□□ 0.13
SPNS2-203ENST00000570979 DLX6P56179 175 aa15.89■□□□□ 0.13
SPNS2-203ENST00000570979 TGIF2LXQ8IUE1 241 aa15.89■□□□□ 0.13
SPNS2-203ENST00000570979 OR10D4PQ8NGN7 298 aa15.89■□□□□ 0.13
SPNS2-203ENST00000570979 NEU4Q8WWR8 484 aaPredicted RBP15.89■□□□□ 0.13
SPNS2-203ENST00000570979 TMEM133Q9H2Q1 129 aa15.89■□□□□ 0.13
SPNS2-203ENST00000570979 CTSZQ9UBR2 303 aa15.89■□□□□ 0.13
SPNS2-203ENST00000570979 FLNAP21333 2647 aaKnown RBP15.89■□□□□ 0.13
SPNS2-203ENST00000570979 DOCK11Q5JSL3 2073 aa15.88■□□□□ 0.13
SPNS2-203ENST00000570979 MT-CO2P00403 227 aa15.88■□□□□ 0.13
SPNS2-203ENST00000570979 SUB1P53999 127 aaKnown RBP eCLIP15.88■□□□□ 0.13
SPNS2-203ENST00000570979 RPL8P62917 257 aaKnown RBP15.88■□□□□ 0.13
SPNS2-203ENST00000570979 GAMTQ14353 236 aa15.88■□□□□ 0.13
SPNS2-203ENST00000570979 VMA21Q3ZAQ7 101 aa15.88■□□□□ 0.13
SPNS2-203ENST00000570979 TMEM167AQ8TBQ9 72 aa15.88■□□□□ 0.13
SPNS2-203ENST00000570979 C20orf24Q9BUV8 137 aa15.88■□□□□ 0.13
SPNS2-203ENST00000570979 C19orf24Q9BVV8 132 aa15.88■□□□□ 0.13
SPNS2-203ENST00000570979 MRPL20Q9BYC9 149 aaKnown RBP15.88■□□□□ 0.13
SPNS2-203ENST00000570979 CTDSP1Q9GZU7 261 aa15.88■□□□□ 0.13
SPNS2-203ENST00000570979 BEX4Q9NWD9 120 aaPredicted RBP15.88■□□□□ 0.13
SPNS2-203ENST00000570979 AMMECR1Q9Y4X0 333 aaPredicted RBP15.88■□□□□ 0.13
SPNS2-203ENST00000570979 YLPM1P49750 1951 aaKnown RBP15.88■□□□□ 0.13
SPNS2-203ENST00000570979 CA2P00918 260 aa15.87■□□□□ 0.13
SPNS2-203ENST00000570979 IGKV1D-33P01593 117 aa15.87■□□□□ 0.13
SPNS2-203ENST00000570979 IGKV1-33P01594 117 aa15.87■□□□□ 0.13
SPNS2-203ENST00000570979 AKR1C3P42330 323 aa15.87■□□□□ 0.13
SPNS2-203ENST00000570979 RPL29P47914 159 aaKnown RBP15.87■□□□□ 0.13
SPNS2-203ENST00000570979 UTF1Q5T230 341 aa15.87■□□□□ 0.13
SPNS2-203ENST00000570979 CACNG8Q8WXS5 425 aa15.87■□□□□ 0.13
SPNS2-203ENST00000570979 NABP2Q9BQ15 211 aa15.87■□□□□ 0.13
SPNS2-203ENST00000570979 SLC25A22Q9H936 323 aa15.87■□□□□ 0.13
SPNS2-203ENST00000570979 CBLN4Q9NTU7 201 aa15.87■□□□□ 0.13
SPNS2-203ENST00000570979 LSM4Q9Y4Z0 139 aaKnown RBP15.87■□□□□ 0.13
SPNS2-203ENST00000570979 TEX50A0A1B0GTY4 177 aa15.87■□□□□ 0.13
SPNS2-203ENST00000570979 SAA1P0DJI8 122 aaPredicted RBP15.87■□□□□ 0.13
SPNS2-203ENST00000570979 RPS10P46783 165 aaKnown RBP15.87■□□□□ 0.13
SPNS2-203ENST00000570979 NDUFA6P56556 154 aa15.87■□□□□ 0.13
SPNS2-203ENST00000570979 RIPPLY3P57055 190 aa15.87■□□□□ 0.13
SPNS2-203ENST00000570979 RPS16P62249 146 aaKnown RBP15.87■□□□□ 0.13
SPNS2-203ENST00000570979 FAM90A2PQ658T7 463 aa15.87■□□□□ 0.13
SPNS2-203ENST00000570979 ST6GALNAC6Q969X2 333 aa15.87■□□□□ 0.13
SPNS2-203ENST00000570979 HINT2Q9BX68 163 aa15.87■□□□□ 0.13
SPNS2-203ENST00000570979 NAT8Q9UHE5 227 aa15.87■□□□□ 0.13
SPNS2-203ENST00000570979 ZNF727A8MUV8 499 aa15.86■□□□□ 0.13
SPNS2-203ENST00000570979 A8MWP6 167 aa15.86■□□□□ 0.13
SPNS2-203ENST00000570979 PDE6DO43924 150 aa15.86■□□□□ 0.13
SPNS2-203ENST00000570979 IGKV1-16P04430 117 aa15.86■□□□□ 0.13
SPNS2-203ENST00000570979 OR8B3Q8NGG8 313 aa15.86■□□□□ 0.13
SPNS2-203ENST00000570979 C8orf46Q8TAG6 207 aa15.86■□□□□ 0.13
SPNS2-203ENST00000570979 MISP3Q96FF7 219 aa15.86■□□□□ 0.13
SPNS2-203ENST00000570979 OR8B2Q96RD0 313 aa15.86■□□□□ 0.13
SPNS2-203ENST00000570979 GSX1Q9H4S2 264 aaPredicted RBP15.86■□□□□ 0.13
SPNS2-203ENST00000570979 PXMP4Q9Y6I8 212 aa15.86■□□□□ 0.13
SPNS2-203ENST00000570979 CXorf1O96002 111 aa15.85■□□□□ 0.13
SPNS2-203ENST00000570979 RHOBP62745 196 aa15.85■□□□□ 0.13
SPNS2-203ENST00000570979 SSX7Q7RTT5 188 aa15.85■□□□□ 0.13
SPNS2-203ENST00000570979 TMEM144Q7Z5S9 345 aa15.85■□□□□ 0.13
SPNS2-203ENST00000570979 SLC35E1Q96K37 410 aa15.85■□□□□ 0.13
SPNS2-203ENST00000570979 GGTLC1Q9BX51 225 aa15.85■□□□□ 0.13
SPNS2-203ENST00000570979 HIST1H2BKO60814 126 aa15.85■□□□□ 0.13
SPNS2-203ENST00000570979 HIST1H2BJP06899 126 aa15.85■□□□□ 0.13
SPNS2-203ENST00000570979 HIST1H2BOP23527 126 aa15.85■□□□□ 0.13
SPNS2-203ENST00000570979 HIST1H2BBP33778 126 aa15.85■□□□□ 0.13
SPNS2-203ENST00000570979 HIST1H2BDP58876 126 aa15.85■□□□□ 0.13
SPNS2-203ENST00000570979 HIST1H2BCP62807 126 aa15.85■□□□□ 0.13
SPNS2-203ENST00000570979 HIST2H2BEQ16778 126 aa15.85■□□□□ 0.13
SPNS2-203ENST00000570979 TMEM241Q24JQ0 296 aa15.85■□□□□ 0.13
SPNS2-203ENST00000570979 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.85■□□□□ 0.13
SPNS2-203ENST00000570979 IGFBPL1Q8WX77 278 aa15.85■□□□□ 0.13
SPNS2-203ENST00000570979 HIST1H2BHQ93079 126 aa15.85■□□□□ 0.13
SPNS2-203ENST00000570979 CCL19Q99731 98 aa15.85■□□□□ 0.13
SPNS2-203ENST00000570979 HIST1H2BNQ99877 126 aa15.85■□□□□ 0.13
SPNS2-203ENST00000570979 HIST1H2BMQ99879 126 aa15.85■□□□□ 0.13
SPNS2-203ENST00000570979 SDF2L1Q9HCN8 221 aa15.85■□□□□ 0.13
SPNS2-203ENST00000570979 F6UZH7 168 aa15.84■□□□□ 0.13
SPNS2-203ENST00000570979 GAGE1Q13065 139 aa15.84■□□□□ 0.13
SPNS2-203ENST00000570979 JOSD1Q15040 202 aaPredicted RBP15.84■□□□□ 0.13
SPNS2-203ENST00000570979 BSXQ3C1V8 233 aa15.84■□□□□ 0.13
SPNS2-203ENST00000570979 CYP2G1PQ6ZSU1 146 aa15.84■□□□□ 0.13
SPNS2-203ENST00000570979 Q8N7P7 452 aa15.84■□□□□ 0.13
SPNS2-203ENST00000570979 TEX45Q8NA69 505 aa15.84■□□□□ 0.13
SPNS2-203ENST00000570979 MGST2Q99735 147 aa15.84■□□□□ 0.13
SPNS2-203ENST00000570979 NDUFA4L2Q9NRX3 87 aa15.84■□□□□ 0.13
SPNS2-203ENST00000570979 SRRM4A7MD48 611 aaKnown RBP15.83■□□□□ 0.12
SPNS2-203ENST00000570979 HLA-DRB5Q30154 266 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms