RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 U3KQE9 123 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 TET2Q6N021 2002 aaPredicted RBP2.88□□□□□ -1.95
SMG6-208ENST00000570874 CADP27708 2225 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 CEP250Q9BV73 2442 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 POLEQ07864 2286 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 LOC102725191A0A1B0GVB3 256 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 TMEM269A0A1B0GVZ9 245 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 LOC107986453A0A1B0GWG9 222 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 hADV38S2A0JD32 116 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 TMEM212A6NML5 194 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.88□□□□□ -1.95
SMG6-208ENST00000570874 J3QR89 54 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 PHOX2AO14813 284 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 REG1AP05451 166 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 FAM106CPP0CH98 169 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 SLC25A4P12235 298 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 ZNF32P17041 273 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 RPL7P18124 248 aaKnown RBP2.88□□□□□ -1.95
SMG6-208ENST00000570874 BCL3P20749 454 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 CNTFRP26992 372 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 TSPOP30536 169 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 HNRNPA3P51991 378 aaKnown RBP2.88□□□□□ -1.95
SMG6-208ENST00000570874 SUB1P53999 127 aaKnown RBP eCLIP2.88□□□□□ -1.95
SMG6-208ENST00000570874 TAS2R20P59543 309 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 SEC61A1P61619 476 aaKnown RBP2.88□□□□□ -1.95
SMG6-208ENST00000570874 RPS27AP62979 156 aaKnown RBP2.88□□□□□ -1.95
SMG6-208ENST00000570874 UBA52P62987 128 aaKnown RBP2.88□□□□□ -1.95
SMG6-208ENST00000570874 PSG9Q00887 426 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 RBM39Q14498 530 aaKnown RBP2.88□□□□□ -1.95
SMG6-208ENST00000570874 IGFBP7Q16270 282 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 RSPO1Q2MKA7 263 aaPredicted RBP2.88□□□□□ -1.95
SMG6-208ENST00000570874 Q499Y3 187 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 FAM106AQ4KMX7 169 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 PYY3Q5JQD4 70 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 C10orf128Q5T292 105 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 TSPO2Q5TGU0 170 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 EIF5AL1Q6IS14 154 aaKnown RBP2.88□□□□□ -1.95
SMG6-208ENST00000570874 PRSS54Q6PEW0 395 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 IL34Q6ZMJ4 242 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 LCNL1Q6ZST4 164 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 FAM57BQ71RH2 274 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 MOB1BQ7L9L4 216 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 HOGA1Q86XE5 327 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 FTMTQ8N4E7 242 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 SLC35G3Q8N808 338 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 ZFP62Q8NB50 900 aaPredicted RBP2.88□□□□□ -1.95
SMG6-208ENST00000570874 OR13C8Q8NGS7 320 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 SPATA3Q8NHX4 192 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 PHLDA1Q8WV24 401 aaPredicted RBP2.88□□□□□ -1.95
SMG6-208ENST00000570874 TMEM106AQ96A25 262 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 SARAFQ96BY9 339 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 SLC25A38Q96DW6 304 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 MALSU1Q96EH3 234 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 ADAT3Q96EY9 351 aaPredicted RBP2.88□□□□□ -1.95
SMG6-208ENST00000570874 IP6K3Q96PC2 410 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 SPACA5Q96QH8 159 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 KIR2DL4Q99706 377 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 RTBDNQ9BSG5 229 aaPredicted RBP2.88□□□□□ -1.95
SMG6-208ENST00000570874 SAMD10Q9BYL1 202 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 KRTAP9-3Q9BYQ3 159 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 PBOV1Q9GZY1 135 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 RNASE7Q9H1E1 156 aaKnown RBP2.88□□□□□ -1.95
SMG6-208ENST00000570874 IFI27L2Q9H2X8 130 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 NOX3Q9HBY0 568 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 SERTAD4Q9NUC0 356 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 MRPL27Q9P0M9 148 aaKnown RBP2.88□□□□□ -1.95
SMG6-208ENST00000570874 OR5V1Q9UGF6 321 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 PKIGQ9Y2B9 76 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 KLF13Q9Y2Y9 288 aaPredicted RBP2.88□□□□□ -1.95
SMG6-208ENST00000570874 RFNGQ9Y644 331 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 V9GY05 133 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 RIF1Q5UIP0 2472 aaKnown RBP2.88□□□□□ -1.95
SMG6-208ENST00000570874 FRYQ5TBA9 3013 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 ARFGEF3Q5TH69 2177 aa2.88□□□□□ -1.95
SMG6-208ENST00000570874 PTPRZ1P23471 2315 aaPredicted RBP2.87□□□□□ -1.95
SMG6-208ENST00000570874 ACACAQ13085 2346 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 PTPRQQ9UMZ3 2332 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 AKAP13Q12802 2813 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 TRGV5A0A0B4J1U4 118 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 TMEM272A0A1B0GTI8 110 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 DUXBA0A1W2PPF3 345 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 MEIS3P1A6NDR6 274 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 C9JAW5 83 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 DIRC3C9JPN6 131 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 F5H5P2 479 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 RHODO00212 210 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 RRHO14718 337 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 OR2H2O95918 312 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 ELANEP08246 267 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 SNRPCP09234 159 aaKnown RBP2.87□□□□□ -1.95
SMG6-208ENST00000570874 LGALS1P09382 135 aaKnown RBP2.87□□□□□ -1.95
SMG6-208ENST00000570874 SCTP09683 121 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 AKAIN1P0CW23 69 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 SELEP16581 610 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 HOXA5P20719 270 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 CA6P23280 308 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 ATP6V0CP27449 155 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 SAA4P35542 130 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 KIR2DS2P43631 304 aa2.87□□□□□ -1.95
SMG6-208ENST00000570874 TAS2R19P59542 299 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms