RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 HIPK2Q9H2X6 1198 aa9.28□□□□□ -0.92
CTDNEP1-205ENST00000570828 DAZ1Q9NQZ3 744 aaKnown RBP9.28□□□□□ -0.92
CTDNEP1-205ENST00000570828 K7EIM0 57 aa9.27□□□□□ -0.93
CTDNEP1-205ENST00000570828 NDUFA4O00483 81 aa9.27□□□□□ -0.93
CTDNEP1-205ENST00000570828 IGKV1-39P01597 117 aa9.27□□□□□ -0.93
CTDNEP1-205ENST00000570828 CD3DP04234 171 aa9.27□□□□□ -0.93
CTDNEP1-205ENST00000570828 IGKV1D-39P04432 117 aa9.27□□□□□ -0.93
CTDNEP1-205ENST00000570828 C8orf88P0DMB2 117 aa9.27□□□□□ -0.93
CTDNEP1-205ENST00000570828 PPP5CP53041 499 aa9.27□□□□□ -0.93
CTDNEP1-205ENST00000570828 PIGPP57054 158 aa9.27□□□□□ -0.93
CTDNEP1-205ENST00000570828 RND3P61587 244 aa9.27□□□□□ -0.93
CTDNEP1-205ENST00000570828 GPR141Q7Z602 305 aa9.27□□□□□ -0.93
CTDNEP1-205ENST00000570828 FAM110AQ9BQ89 295 aa9.27□□□□□ -0.93
CTDNEP1-205ENST00000570828 C20orf24Q9BUV8 137 aa9.27□□□□□ -0.93
CTDNEP1-205ENST00000570828 GAR1Q9NY12 217 aaKnown RBP9.27□□□□□ -0.93
CTDNEP1-205ENST00000570828 MTFP1Q9UDX5 166 aa9.27□□□□□ -0.93
CTDNEP1-205ENST00000570828 DYNC2H1Q8NCM8 4307 aaKnown RBP9.27□□□□□ -0.93
CTDNEP1-205ENST00000570828 RGS5O15539 181 aa9.26□□□□□ -0.93
CTDNEP1-205ENST00000570828 PI3P19957 117 aa9.26□□□□□ -0.93
CTDNEP1-205ENST00000570828 AKR1C2P52895 323 aa9.26□□□□□ -0.93
CTDNEP1-205ENST00000570828 PRCDQ00LT1 54 aa9.26□□□□□ -0.93
CTDNEP1-205ENST00000570828 LHFPL1Q86WI0 220 aa9.26□□□□□ -0.93
CTDNEP1-205ENST00000570828 OR2C3Q8N628 320 aa9.26□□□□□ -0.93
CTDNEP1-205ENST00000570828 MISP3Q96FF7 219 aa9.26□□□□□ -0.93
CTDNEP1-205ENST00000570828 SPAG8Q99932 426 aaPredicted RBP9.26□□□□□ -0.93
CTDNEP1-205ENST00000570828 CHRDL1Q9BU40 450 aa9.26□□□□□ -0.93
CTDNEP1-205ENST00000570828 C5orf66Q9H5L9 145 aa9.26□□□□□ -0.93
CTDNEP1-205ENST00000570828 IGHV3OR16-8A0A075B7F1 116 aa9.25□□□□□ -0.93
CTDNEP1-205ENST00000570828 NUPL2O15504 423 aaKnown RBP9.25□□□□□ -0.93
CTDNEP1-205ENST00000570828 ATG12O94817 140 aa9.25□□□□□ -0.93
CTDNEP1-205ENST00000570828 TAS2R19P59542 299 aa9.25□□□□□ -0.93
CTDNEP1-205ENST00000570828 HSPE1P61604 102 aaKnown RBP9.25□□□□□ -0.93
CTDNEP1-205ENST00000570828 RELQ04864 619 aaPredicted RBP9.25□□□□□ -0.93
CTDNEP1-205ENST00000570828 TRIM16LQ309B1 348 aa9.25□□□□□ -0.93
CTDNEP1-205ENST00000570828 LAMTOR1Q6IAA8 161 aa9.25□□□□□ -0.93
CTDNEP1-205ENST00000570828 CCDC71LQ8N9Z2 235 aa9.25□□□□□ -0.93
CTDNEP1-205ENST00000570828 ZNF114Q8NC26 417 aa9.25□□□□□ -0.93
CTDNEP1-205ENST00000570828 TRIM63Q969Q1 353 aa9.25□□□□□ -0.93
CTDNEP1-205ENST00000570828 ABHD1Q96SE0 405 aa9.25□□□□□ -0.93
CTDNEP1-205ENST00000570828 GGTLC1Q9BX51 225 aa9.25□□□□□ -0.93
CTDNEP1-205ENST00000570828 COPZ2Q9P299 210 aa9.25□□□□□ -0.93
CTDNEP1-205ENST00000570828 LOC102724200A0A096LPH7 203 aaPredicted RBP9.24□□□□□ -0.93
CTDNEP1-205ENST00000570828 C3orf85A0A1B0GTC6 90 aa9.24□□□□□ -0.93
CTDNEP1-205ENST00000570828 GABARAPH6UMI1 98 aa9.24□□□□□ -0.93
CTDNEP1-205ENST00000570828 TSPAN4O14817 238 aa9.24□□□□□ -0.93
CTDNEP1-205ENST00000570828 RAB3DO95716 219 aa9.24□□□□□ -0.93
CTDNEP1-205ENST00000570828 CD74P04233 296 aa9.24□□□□□ -0.93
CTDNEP1-205ENST00000570828 ADMP35318 185 aa9.24□□□□□ -0.93
CTDNEP1-205ENST00000570828 MFAP4P55083 255 aa9.24□□□□□ -0.93
CTDNEP1-205ENST00000570828 MRPS10P82664 201 aaKnown RBP9.24□□□□□ -0.93
CTDNEP1-205ENST00000570828 ERHP84090 104 aaKnown RBP9.24□□□□□ -0.93
CTDNEP1-205ENST00000570828 IZUMO4Q1ZYL8 232 aa9.24□□□□□ -0.93
CTDNEP1-205ENST00000570828 SCGB2B2Q4G0G5 96 aa9.24□□□□□ -0.93
CTDNEP1-205ENST00000570828 SLC35G3Q8N808 338 aa9.24□□□□□ -0.93
CTDNEP1-205ENST00000570828 TMEM229BQ8NBD8 167 aa9.24□□□□□ -0.93
CTDNEP1-205ENST00000570828 OR4D10Q8NGI6 311 aa9.24□□□□□ -0.93
CTDNEP1-205ENST00000570828 TERB2Q8NHR7 220 aa9.24□□□□□ -0.93
CTDNEP1-205ENST00000570828 RNASE11Q8TAA1 199 aaKnown RBP9.24□□□□□ -0.93
CTDNEP1-205ENST00000570828 ZFAND1Q8TCF1 268 aa9.24□□□□□ -0.93
CTDNEP1-205ENST00000570828 PINX1Q96BK5 328 aaKnown RBP9.24□□□□□ -0.93
CTDNEP1-205ENST00000570828 TP53RKQ96S44 253 aa9.24□□□□□ -0.93
CTDNEP1-205ENST00000570828 PDCD10Q9BUL8 212 aa9.24□□□□□ -0.93
CTDNEP1-205ENST00000570828 STARD9Q9P2P6 4700 aa9.24□□□□□ -0.93
CTDNEP1-205ENST00000570828 TENM2Q9NT68 2774 aa9.24□□□□□ -0.93
CTDNEP1-205ENST00000570828 C15orf62A8K5M9 175 aa9.23□□□□□ -0.93
CTDNEP1-205ENST00000570828 I3L2K1 104 aa9.23□□□□□ -0.93
CTDNEP1-205ENST00000570828 K7EMT4 169 aa9.23□□□□□ -0.93
CTDNEP1-205ENST00000570828 ZNF207O43670 478 aaKnown RBP9.23□□□□□ -0.93
CTDNEP1-205ENST00000570828 EIF4EBP3O60516 100 aaPredicted RBP9.23□□□□□ -0.93
CTDNEP1-205ENST00000570828 YIF1AO95070 293 aa9.23□□□□□ -0.93
CTDNEP1-205ENST00000570828 MT-CO2P00403 227 aa9.23□□□□□ -0.93
CTDNEP1-205ENST00000570828 IFNA17P01571 189 aa9.23□□□□□ -0.93
CTDNEP1-205ENST00000570828 IGKV1-5P01602 117 aa9.23□□□□□ -0.93
CTDNEP1-205ENST00000570828 CTSGP08311 255 aa9.23□□□□□ -0.93
CTDNEP1-205ENST00000570828 FCGR2BP31994 310 aaPredicted RBP9.23□□□□□ -0.93
CTDNEP1-205ENST00000570828 SNCAP37840 140 aa9.23□□□□□ -0.93
CTDNEP1-205ENST00000570828 ALDH3B2P48448 385 aa9.23□□□□□ -0.93
CTDNEP1-205ENST00000570828 SSBP1Q04837 148 aaKnown RBP9.23□□□□□ -0.93
CTDNEP1-205ENST00000570828 MEF2DQ14814 521 aa9.23□□□□□ -0.93
CTDNEP1-205ENST00000570828 SPCS2Q15005 226 aa9.23□□□□□ -0.93
CTDNEP1-205ENST00000570828 SPINK9Q5DT21 86 aa9.23□□□□□ -0.93
CTDNEP1-205ENST00000570828 STEAP1BQ6NZ63 245 aa9.23□□□□□ -0.93
CTDNEP1-205ENST00000570828 OR13C8Q8NGS7 320 aa9.23□□□□□ -0.93
CTDNEP1-205ENST00000570828 IL17DQ8TAD2 202 aa9.23□□□□□ -0.93
CTDNEP1-205ENST00000570828 TXN2Q99757 166 aa9.23□□□□□ -0.93
CTDNEP1-205ENST00000570828 MIXL1Q9H2W2 232 aa9.23□□□□□ -0.93
CTDNEP1-205ENST00000570828 SACSQ9NZJ4 4579 aa9.22□□□□□ -0.93
CTDNEP1-205ENST00000570828 RYR2Q92736 4967 aa9.22□□□□□ -0.93
CTDNEP1-205ENST00000570828 LCE6AA0A183 80 aa9.22□□□□□ -0.93
CTDNEP1-205ENST00000570828 OR4C46A6NHA9 309 aa9.22□□□□□ -0.93
CTDNEP1-205ENST00000570828 GNG7O60262 68 aa9.22□□□□□ -0.93
CTDNEP1-205ENST00000570828 B3GALNT1O75752 331 aa9.22□□□□□ -0.93
CTDNEP1-205ENST00000570828 HOXA1P49639 335 aaPredicted RBP9.22□□□□□ -0.93
CTDNEP1-205ENST00000570828 CLVS1Q8IUQ0 354 aaPredicted RBP9.22□□□□□ -0.93
CTDNEP1-205ENST00000570828 MARCH1Q8TCQ1 289 aa9.22□□□□□ -0.93
CTDNEP1-205ENST00000570828 RAB2BQ8WUD1 216 aa9.22□□□□□ -0.93
CTDNEP1-205ENST00000570828 SMIM4Q8WVI0 70 aa9.22□□□□□ -0.93
CTDNEP1-205ENST00000570828 RRNAD1Q96FB5 475 aaKnown RBP9.22□□□□□ -0.93
CTDNEP1-205ENST00000570828 ENY2Q9NPA8 101 aa9.22□□□□□ -0.93
CTDNEP1-205ENST00000570828 UBQLN2Q9UHD9 624 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms