RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 GCSAMLQ5JQS6 135 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 MMD2Q8IY49 270 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 STPG3Q8N7X2 389 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 THAP8Q8NA92 274 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 ZNF114Q8NC26 417 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 ABHD5Q8WTS1 349 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 ITLN2Q8WWU7 325 aaPredicted RBP4.33□□□□□ -1.72
SF3B3-213ENST00000569687 RITA1Q96K30 269 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 RNF2Q99496 336 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 SRSF8Q9BRL6 282 aaKnown RBP4.33□□□□□ -1.72
SF3B3-213ENST00000569687 PYGO2Q9BRQ0 406 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 ZNF430Q9H8G1 570 aaPredicted RBP4.33□□□□□ -1.72
SF3B3-213ENST00000569687 SLC25A22Q9H936 323 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 CHODLQ9H9P2 273 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 DOK5Q9P104 306 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 AMMECR1Q9Y4X0 333 aaPredicted RBP4.33□□□□□ -1.72
SF3B3-213ENST00000569687 INSIG2Q9Y5U4 225 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 USP24Q9UPU5 2620 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 ARFGEF3Q5TH69 2177 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 RAI1Q7Z5J4 1906 aaPredicted RBP4.33□□□□□ -1.72
SF3B3-213ENST00000569687 ATRXP46100 2492 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 ROS1P08922 2347 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 TRBV24-1A0A075B6N3 115 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 LOC105371242A0A075B767 164 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 IGKV1OR2-108A0A075B7D4 117 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 IGHV1-3A0A0C4DH29 117 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 PSMB11A5LHX3 300 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 C5orf52A6NGY3 159 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 OOSP1A8MZH6 123 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 E7EUB6 86 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 CLDN34H7C241 214 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 J3KRW8 73 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 HMGB3O15347 200 aaKnown RBP4.32□□□□□ -1.72
SF3B3-213ENST00000569687 GOSR1O95249 250 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 MT-CO2P00403 227 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 OPN1MWP04001 364 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 PRB1P04280 392 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 PFN1P07737 140 aaKnown RBP4.32□□□□□ -1.72
SF3B3-213ENST00000569687 SOD3P08294 240 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 OPN1MW2P0DN77 364 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 OPN1MW3P0DN78 364 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 CD99P14209 185 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 IGFBP2P18065 325 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 NPPCP23582 126 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 COL8A1P27658 744 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 GCHFRP30047 84 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 REG1BP48304 166 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 SELENOTP62341 195 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 RPL23P62829 140 aaKnown RBP4.32□□□□□ -1.72
SF3B3-213ENST00000569687 WT1-ASQ06250 92 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 KIR3DS1Q14943 382 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 AKIRIN2Q53H80 203 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 ETFRF1Q6IPR1 90 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 SPNS3Q6ZMD2 512 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 ZNF843Q8N446 348 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 KIR3DL3Q8N743 410 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 RNF152Q8N8N0 203 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 OR10W1Q8NGF6 305 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 OR4P4Q8NGL7 312 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 OR4F5Q8NH21 305 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 GATAD1Q8WUU5 269 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 OR4F4Q96R69 305 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 IMMP2LQ96T52 175 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 SMIM7Q9BQ49 75 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 HINT2Q9BX68 163 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 DNAJC4Q9NNZ3 241 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 TECRQ9NZ01 308 aaKnown RBP4.32□□□□□ -1.72
SF3B3-213ENST00000569687 DPM3Q9P2X0 92 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 FUT9Q9Y231 359 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 SIGLEC9Q9Y336 463 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 LY96Q9Y6Y9 160 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 HCFC1P51610 2035 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 ACACBO00763 2458 aa4.32□□□□□ -1.72
SF3B3-213ENST00000569687 DOCK11Q5JSL3 2073 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 IGSF10Q6WRI0 2623 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 A0A1W2PPI3 338 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 IGLC7A0M8Q6 106 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 A6NNC1 897 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 PRSS47A8MTI9 375 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 ODF3BA8MYP8 253 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 C11orf94C9JXX5 98 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 OVOL3O00110 214 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 CORTO00230 105 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 ENSAO43768 121 aaKnown RBP4.31□□□□□ -1.72
SF3B3-213ENST00000569687 SLC25A17O43808 307 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 EIF3GO75821 320 aaKnown RBP eCLIP4.31□□□□□ -1.72
SF3B3-213ENST00000569687 IGHV2-5P01817 119 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 OR5G3P0C626 314 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 ARL14EPLP0DKL9 152 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 HTR1DP28221 377 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 OR10J1P30954 320 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 CEACAM3P40198 252 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 EFNA4P52798 201 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 CEBPGP53567 150 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 GNB1P62873 340 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 MLANAQ16655 118 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 TPTE2P1Q5T6R2 138 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 HCP5Q6MZN7 132 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 PQLC2Q6ZP29 291 aa4.31□□□□□ -1.72
SF3B3-213ENST00000569687 SLC16A13Q7RTY0 426 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms