RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 NPY1RP25929 384 aa12.48□□□□□ -0.41
USB1-215ENST00000569252 CDX1P47902 265 aaPredicted RBP12.48□□□□□ -0.41
USB1-215ENST00000569252 FCN2Q15485 313 aa12.48□□□□□ -0.41
USB1-215ENST00000569252 FAM209BQ5JX69 171 aa12.48□□□□□ -0.41
USB1-215ENST00000569252 HIST2H2BDQ6DRA6 164 aa12.48□□□□□ -0.41
USB1-215ENST00000569252 LCNL1Q6ZST4 164 aa12.48□□□□□ -0.41
USB1-215ENST00000569252 ZNF491Q8N8L2 437 aa12.48□□□□□ -0.41
USB1-215ENST00000569252 ASB13Q8WXK3 278 aa12.48□□□□□ -0.41
USB1-215ENST00000569252 EEF1AKMT3Q96AZ1 226 aa12.48□□□□□ -0.41
USB1-215ENST00000569252 PINX1Q96BK5 328 aaKnown RBP12.48□□□□□ -0.41
USB1-215ENST00000569252 SMIM8Q96KF7 97 aa12.48□□□□□ -0.41
USB1-215ENST00000569252 CITED1Q99966 193 aa12.48□□□□□ -0.41
USB1-215ENST00000569252 STRAPQ9Y3F4 350 aaKnown RBP12.48□□□□□ -0.41
USB1-215ENST00000569252 IGLV11-55A0A075B6I3 123 aa12.47□□□□□ -0.41
USB1-215ENST00000569252 TRBV9A0A0B4J1U6 114 aa12.47□□□□□ -0.41
USB1-215ENST00000569252 RPS10-NUDT3A0A1W2PQS6 291 aa12.47□□□□□ -0.41
USB1-215ENST00000569252 A0A1W2PRX2 142 aa12.47□□□□□ -0.41
USB1-215ENST00000569252 OR8U8P0C7N1 319 aa12.47□□□□□ -0.41
USB1-215ENST00000569252 BCAP31P51572 246 aa12.47□□□□□ -0.41
USB1-215ENST00000569252 EXOSC2Q13868 293 aaKnown RBP12.47□□□□□ -0.41
USB1-215ENST00000569252 C15orf32Q32M92 178 aa12.47□□□□□ -0.41
USB1-215ENST00000569252 C2orf83Q53S99 150 aa12.47□□□□□ -0.41
USB1-215ENST00000569252 SPANXN5Q5MJ07 72 aa12.47□□□□□ -0.41
USB1-215ENST00000569252 ETFRF1Q6IPR1 90 aa12.47□□□□□ -0.41
USB1-215ENST00000569252 KLHL30-AS1Q8NEE0 82 aa12.47□□□□□ -0.41
USB1-215ENST00000569252 RCL1Q9Y2P8 373 aaKnown RBP12.47□□□□□ -0.41
USB1-215ENST00000569252 TNCP24821 2201 aa12.46□□□□□ -0.41
USB1-215ENST00000569252 K7EPK0 472 aa12.46□□□□□ -0.41
USB1-215ENST00000569252 RNASE2P10153 161 aaKnown RBP12.46□□□□□ -0.41
USB1-215ENST00000569252 H2BFSP57053 126 aa12.46□□□□□ -0.41
USB1-215ENST00000569252 TAS2R30P59541 319 aa12.46□□□□□ -0.41
USB1-215ENST00000569252 LRRC37A5PQ49AS3 106 aa12.46□□□□□ -0.41
USB1-215ENST00000569252 TCTEX1D4Q5JR98 221 aa12.46□□□□□ -0.41
USB1-215ENST00000569252 Q6ZNX1 250 aa12.46□□□□□ -0.41
USB1-215ENST00000569252 C19orf35Q6ZS72 473 aa12.46□□□□□ -0.41
USB1-215ENST00000569252 RNASEH2CQ8TDP1 164 aaKnown RBP12.46□□□□□ -0.41
USB1-215ENST00000569252 DPF1Q92782 380 aa12.46□□□□□ -0.41
USB1-215ENST00000569252 FANCD2OSQ96PS1 177 aa12.46□□□□□ -0.41
USB1-215ENST00000569252 ZNF436Q9C0F3 470 aaPredicted RBP12.46□□□□□ -0.41
USB1-215ENST00000569252 NBEAL2Q6ZNJ1 2754 aa12.45□□□□□ -0.42
USB1-215ENST00000569252 TRBV7-1A0A0A6YYK4 115 aa12.45□□□□□ -0.42
USB1-215ENST00000569252 M0QZ24 198 aa12.45□□□□□ -0.42
USB1-215ENST00000569252 SCGB2A1O75556 95 aa12.45□□□□□ -0.42
USB1-215ENST00000569252 NDUFB8O95169 186 aa12.45□□□□□ -0.42
USB1-215ENST00000569252 IGHV3-11P01762 117 aa12.45□□□□□ -0.42
USB1-215ENST00000569252 CXCL3P19876 107 aa12.45□□□□□ -0.42
USB1-215ENST00000569252 OPRK1P41145 380 aa12.45□□□□□ -0.42
USB1-215ENST00000569252 FGL1Q08830 312 aa12.45□□□□□ -0.42
USB1-215ENST00000569252 RAB32Q13637 225 aa12.45□□□□□ -0.42
USB1-215ENST00000569252 OR4F17Q8NGA8 305 aa12.45□□□□□ -0.42
USB1-215ENST00000569252 VN1R17PQ8TDU5 208 aa12.45□□□□□ -0.42
USB1-215ENST00000569252 OR5B12Q96R08 314 aa12.45□□□□□ -0.42
USB1-215ENST00000569252 OR4F4Q96R69 305 aa12.45□□□□□ -0.42
USB1-215ENST00000569252 GAR1Q9NY12 217 aaKnown RBP12.45□□□□□ -0.42
USB1-215ENST00000569252 TSPAN15O95858 294 aa12.44□□□□□ -0.42
USB1-215ENST00000569252 CAV2P51636 162 aa12.44□□□□□ -0.42
USB1-215ENST00000569252 KLK9Q2XQG4 91 aa12.44□□□□□ -0.42
USB1-215ENST00000569252 ETV3LQ6ZN32 361 aa12.44□□□□□ -0.42
USB1-215ENST00000569252 OR11H7Q8NGC8 314 aa12.44□□□□□ -0.42
USB1-215ENST00000569252 THAP6Q8TBB0 222 aa12.44□□□□□ -0.42
USB1-215ENST00000569252 PPP1R1CQ8WVI7 109 aa12.44□□□□□ -0.42
USB1-215ENST00000569252 C4orf3Q8WVX3 66 aa12.44□□□□□ -0.42
USB1-215ENST00000569252 RANGRFQ9HD47 186 aaPredicted RBP12.44□□□□□ -0.42
USB1-215ENST00000569252 KLK9Q9UKQ9 250 aa12.44□□□□□ -0.42
USB1-215ENST00000569252 E5RGE8 158 aa12.43□□□□□ -0.42
USB1-215ENST00000569252 H3BP45 60 aa12.43□□□□□ -0.42
USB1-215ENST00000569252 TSC22D2O75157 780 aa12.43□□□□□ -0.42
USB1-215ENST00000569252 SCAF4O95104 1147 aaKnown RBP12.43□□□□□ -0.42
USB1-215ENST00000569252 MT-CO2P00403 227 aa12.43□□□□□ -0.42
USB1-215ENST00000569252 GIPP09681 153 aaPredicted RBP12.43□□□□□ -0.42
USB1-215ENST00000569252 MFAP4P55083 255 aa12.43□□□□□ -0.42
USB1-215ENST00000569252 RAP2BP61225 183 aa12.43□□□□□ -0.42
USB1-215ENST00000569252 IL15RAQ13261 267 aa12.43□□□□□ -0.42
USB1-215ENST00000569252 BSXQ3C1V8 233 aa12.43□□□□□ -0.42
USB1-215ENST00000569252 Q56UQ5 140 aa12.43□□□□□ -0.42
USB1-215ENST00000569252 UBAC2Q8NBM4 344 aa12.43□□□□□ -0.42
USB1-215ENST00000569252 MYOZ3Q8TDC0 251 aa12.43□□□□□ -0.42
USB1-215ENST00000569252 C21orf62Q9NYP8 219 aa12.43□□□□□ -0.42
USB1-215ENST00000569252 PEF1Q9UBV8 284 aaKnown RBP12.43□□□□□ -0.42
USB1-215ENST00000569252 TET2Q6N021 2002 aaPredicted RBP12.43□□□□□ -0.42
USB1-215ENST00000569252 IGHV3-21A0A0B4J1V1 117 aa12.42□□□□□ -0.42
USB1-215ENST00000569252 ANKRD34BA5PLL1 514 aa12.42□□□□□ -0.42
USB1-215ENST00000569252 DEDDO75618 318 aa12.42□□□□□ -0.42
USB1-215ENST00000569252 PRB2P02812 416 aaPredicted RBP12.42□□□□□ -0.42
USB1-215ENST00000569252 HSPB1P04792 205 aaKnown RBP12.42□□□□□ -0.42
USB1-215ENST00000569252 LGALS1P09382 135 aaKnown RBP12.42□□□□□ -0.42
USB1-215ENST00000569252 SLC25A4P12235 298 aa12.42□□□□□ -0.42
USB1-215ENST00000569252 GPX4P36969 197 aaPredicted RBP12.42□□□□□ -0.42
USB1-215ENST00000569252 NUP62P37198 522 aaPredicted RBP12.42□□□□□ -0.42
USB1-215ENST00000569252 NPBWR1P48145 328 aa12.42□□□□□ -0.42
USB1-215ENST00000569252 MFAP2P55001 183 aa12.42□□□□□ -0.42
USB1-215ENST00000569252 DEFA5Q01523 94 aa12.42□□□□□ -0.42
USB1-215ENST00000569252 KIAA0141Q14154 515 aaPredicted RBP12.42□□□□□ -0.42
USB1-215ENST00000569252 ZNF343Q6P1L6 599 aa12.42□□□□□ -0.42
USB1-215ENST00000569252 ACSM6Q6P461 480 aa12.42□□□□□ -0.42
USB1-215ENST00000569252 C8orf86Q6ZUL3 223 aa12.42□□□□□ -0.42
USB1-215ENST00000569252 OR1N2Q8NGR9 330 aa12.42□□□□□ -0.42
USB1-215ENST00000569252 SCARB1Q8WTV0 552 aa12.42□□□□□ -0.42
USB1-215ENST00000569252 DCUN1D4Q92564 292 aa12.42□□□□□ -0.42
USB1-215ENST00000569252 TXN2Q99757 166 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms