RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 LCE1DQ5T752 114 aa7.03□□□□□ -1.28
CAPN3-219ENST00000569136 SLC25A24Q6NUK1 477 aa7.03□□□□□ -1.28
CAPN3-219ENST00000569136 GPHB5Q86YW7 130 aa7.03□□□□□ -1.28
CAPN3-219ENST00000569136 SGPP2Q8IWX5 399 aa7.03□□□□□ -1.28
CAPN3-219ENST00000569136 OR9G4Q8NGQ1 327 aa7.03□□□□□ -1.28
CAPN3-219ENST00000569136 OR1P1Q8NH06 330 aa7.03□□□□□ -1.28
CAPN3-219ENST00000569136 SLC25A21Q9BQT8 299 aaPredicted RBP7.03□□□□□ -1.28
CAPN3-219ENST00000569136 HINT2Q9BX68 163 aa7.03□□□□□ -1.28
CAPN3-219ENST00000569136 TMEM222Q9H0R3 208 aa7.03□□□□□ -1.28
CAPN3-219ENST00000569136 C5orf66Q9H5L9 145 aa7.03□□□□□ -1.28
CAPN3-219ENST00000569136 BATF3Q9NR55 127 aa7.03□□□□□ -1.28
CAPN3-219ENST00000569136 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.03□□□□□ -1.28
CAPN3-219ENST00000569136 GAR1Q9NY12 217 aaKnown RBP7.03□□□□□ -1.28
CAPN3-219ENST00000569136 PEMTQ9UBM1 199 aa7.03□□□□□ -1.28
CAPN3-219ENST00000569136 NSG2Q9Y328 171 aa7.03□□□□□ -1.28
CAPN3-219ENST00000569136 TGP01266 2768 aa7.03□□□□□ -1.28
CAPN3-219ENST00000569136 A0A0B4J293 547 aa7.02□□□□□ -1.29
CAPN3-219ENST00000569136 INS-IGF2F8WCM5 200 aa7.02□□□□□ -1.29
CAPN3-219ENST00000569136 LGALS9O00182 355 aa7.02□□□□□ -1.29
CAPN3-219ENST00000569136 NDUFB8O95169 186 aa7.02□□□□□ -1.29
CAPN3-219ENST00000569136 IGKV1-39P01597 117 aa7.02□□□□□ -1.29
CAPN3-219ENST00000569136 IGKV1D-39P04432 117 aa7.02□□□□□ -1.29
CAPN3-219ENST00000569136 MYOD1P15172 320 aa7.02□□□□□ -1.29
CAPN3-219ENST00000569136 PPP5CP53041 499 aa7.02□□□□□ -1.29
CAPN3-219ENST00000569136 PTTG1IPP53801 180 aa7.02□□□□□ -1.29
CAPN3-219ENST00000569136 SUB1P53999 127 aaKnown RBP eCLIP7.02□□□□□ -1.29
CAPN3-219ENST00000569136 SYNJ2BPP57105 145 aa7.02□□□□□ -1.29
CAPN3-219ENST00000569136 KRTAP10-2P60368 255 aa7.02□□□□□ -1.29
CAPN3-219ENST00000569136 WT1-ASQ06250 92 aa7.02□□□□□ -1.29
CAPN3-219ENST00000569136 KLF9Q13886 244 aaPredicted RBP7.02□□□□□ -1.29
CAPN3-219ENST00000569136 SP6Q3SY56 376 aa7.02□□□□□ -1.29
CAPN3-219ENST00000569136 OR10W1Q8NGF6 305 aa7.02□□□□□ -1.29
CAPN3-219ENST00000569136 GLYATL2Q8WU03 294 aa7.02□□□□□ -1.29
CAPN3-219ENST00000569136 IL22RA2Q969J5 263 aa7.02□□□□□ -1.29
CAPN3-219ENST00000569136 MRGPRFQ96AM1 343 aa7.02□□□□□ -1.29
CAPN3-219ENST00000569136 GALNT14Q96FL9 552 aa7.02□□□□□ -1.29
CAPN3-219ENST00000569136 TP53RKQ96S44 253 aa7.02□□□□□ -1.29
CAPN3-219ENST00000569136 PDCD10Q9BUL8 212 aa7.02□□□□□ -1.29
CAPN3-219ENST00000569136 NAA60Q9H7X0 242 aa7.02□□□□□ -1.29
CAPN3-219ENST00000569136 ZNF256Q9Y2P7 627 aaPredicted RBP7.02□□□□□ -1.29
CAPN3-219ENST00000569136 F11RQ9Y624 299 aaKnown RBP7.02□□□□□ -1.29
CAPN3-219ENST00000569136 TMEM56-RWDD3S4R434 201 aa7.02□□□□□ -1.29
CAPN3-219ENST00000569136 V9GYH0 126 aa7.02□□□□□ -1.29
CAPN3-219ENST00000569136 WI2-2373I1.2A0A1W2PRP0 233 aa7.01□□□□□ -1.29
CAPN3-219ENST00000569136 NAP1L6A6NFF2 107 aa7.01□□□□□ -1.29
CAPN3-219ENST00000569136 CRYM-AS1A6NIL9 109 aa7.01□□□□□ -1.29
CAPN3-219ENST00000569136 K7EIL1 84 aa7.01□□□□□ -1.29
CAPN3-219ENST00000569136 BMPR1BO00238 502 aa7.01□□□□□ -1.29
CAPN3-219ENST00000569136 IFNA17P01571 189 aa7.01□□□□□ -1.29
CAPN3-219ENST00000569136 REG1AP05451 166 aa7.01□□□□□ -1.29
CAPN3-219ENST00000569136 P0C879 139 aa7.01□□□□□ -1.29
CAPN3-219ENST00000569136 ANXA3P12429 323 aa7.01□□□□□ -1.29
CAPN3-219ENST00000569136 SNCAP37840 140 aa7.01□□□□□ -1.29
CAPN3-219ENST00000569136 INPP1P49441 399 aa7.01□□□□□ -1.29
CAPN3-219ENST00000569136 AKR1C2P52895 323 aa7.01□□□□□ -1.29
CAPN3-219ENST00000569136 SRPXP78539 464 aa7.01□□□□□ -1.29
CAPN3-219ENST00000569136 PRCDQ00LT1 54 aa7.01□□□□□ -1.29
CAPN3-219ENST00000569136 FAAP20Q6NZ36 180 aa7.01□□□□□ -1.29
CAPN3-219ENST00000569136 SPSB3Q6PJ21 355 aa7.01□□□□□ -1.29
CAPN3-219ENST00000569136 LINC00299Q6ZSB3 139 aa7.01□□□□□ -1.29
CAPN3-219ENST00000569136 SELENOHQ8IZQ5 122 aaKnown RBP7.01□□□□□ -1.29
CAPN3-219ENST00000569136 OR2C3Q8N628 320 aa7.01□□□□□ -1.29
CAPN3-219ENST00000569136 OR52E5Q8NH55 327 aa7.01□□□□□ -1.29
CAPN3-219ENST00000569136 RNASE11Q8TAA1 199 aaKnown RBP7.01□□□□□ -1.29
CAPN3-219ENST00000569136 RBPMSQ93062 196 aaKnown RBP7.01□□□□□ -1.29
CAPN3-219ENST00000569136 TXN2Q99757 166 aa7.01□□□□□ -1.29
CAPN3-219ENST00000569136 PLEKHA3Q9HB20 300 aa7.01□□□□□ -1.29
CAPN3-219ENST00000569136 ENY2Q9NPA8 101 aa7.01□□□□□ -1.29
CAPN3-219ENST00000569136 CENPXA8MT69 81 aa7□□□□□ -1.29
CAPN3-219ENST00000569136 OR2C1O95371 312 aa7□□□□□ -1.29
CAPN3-219ENST00000569136 SCGB1D2O95969 90 aa7□□□□□ -1.29
CAPN3-219ENST00000569136 IGKV1-5P01602 117 aa7□□□□□ -1.29
CAPN3-219ENST00000569136 IGLV1-51P01701 117 aa7□□□□□ -1.29
CAPN3-219ENST00000569136 TRBV12-3P01733 135 aa7□□□□□ -1.29
CAPN3-219ENST00000569136 CSN3P07498 182 aa7□□□□□ -1.29
CAPN3-219ENST00000569136 OR5AC1P0C628 307 aa7□□□□□ -1.29
CAPN3-219ENST00000569136 AKR1C4P17516 323 aa7□□□□□ -1.29
CAPN3-219ENST00000569136 ARL3P36405 182 aa7□□□□□ -1.29
CAPN3-219ENST00000569136 SPCS3P61009 180 aa7□□□□□ -1.29
CAPN3-219ENST00000569136 ZNF79Q15937 498 aa7□□□□□ -1.29
CAPN3-219ENST00000569136 CNPY1Q3B7I2 92 aa7□□□□□ -1.29
CAPN3-219ENST00000569136 AARDQ4LEZ3 155 aa7□□□□□ -1.29
CAPN3-219ENST00000569136 TMEM128Q5BJH2 165 aa7□□□□□ -1.29
CAPN3-219ENST00000569136 ZNF57Q68EA5 555 aaPredicted RBP7□□□□□ -1.29
CAPN3-219ENST00000569136 PLET1Q6UQ28 207 aa7□□□□□ -1.29
CAPN3-219ENST00000569136 CLEC19AQ6UXS0 136 aa7□□□□□ -1.29
CAPN3-219ENST00000569136 IL34Q6ZMJ4 242 aa7□□□□□ -1.29
CAPN3-219ENST00000569136 ZNF114Q8NC26 417 aa7□□□□□ -1.29
CAPN3-219ENST00000569136 OR2K2Q8NGT1 345 aa7□□□□□ -1.29
CAPN3-219ENST00000569136 ZNF502Q8TBZ5 544 aa7□□□□□ -1.29
CAPN3-219ENST00000569136 TRIM63Q969Q1 353 aa7□□□□□ -1.29
CAPN3-219ENST00000569136 PALMDQ9NP74 551 aa7□□□□□ -1.29
CAPN3-219ENST00000569136 TECRQ9NZ01 308 aaKnown RBP7□□□□□ -1.29
CAPN3-219ENST00000569136 DMRT1Q9Y5R6 373 aa7□□□□□ -1.29
CAPN3-219ENST00000569136 NHLRC4P0CG21 123 aaPredicted RBP6.99□□□□□ -1.29
CAPN3-219ENST00000569136 MALP21145 153 aa6.99□□□□□ -1.29
CAPN3-219ENST00000569136 FCGR2BP31994 310 aaPredicted RBP6.99□□□□□ -1.29
CAPN3-219ENST00000569136 MFAP4P55083 255 aa6.99□□□□□ -1.29
CAPN3-219ENST00000569136 ELLP55199 621 aaPredicted RBP6.99□□□□□ -1.29
CAPN3-219ENST00000569136 ATP5IP56385 69 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms