RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 ETV6P41212 452 aa13.2□□□□□ -0.3
EDC3-215ENST00000569007 ELLP55199 621 aaPredicted RBP13.2□□□□□ -0.3
EDC3-215ENST00000569007 BTNL8Q6UX41 500 aa13.2□□□□□ -0.3
EDC3-215ENST00000569007 MARC2Q969Z3 335 aa13.2□□□□□ -0.3
EDC3-215ENST00000569007 NEURL2Q9BR09 285 aa13.2□□□□□ -0.3
EDC3-215ENST00000569007 PDCD10Q9BUL8 212 aa13.2□□□□□ -0.3
EDC3-215ENST00000569007 SCP2D1Q9UJQ7 156 aa13.2□□□□□ -0.3
EDC3-215ENST00000569007 NBEAL2Q6ZNJ1 2754 aa13.2□□□□□ -0.3
EDC3-215ENST00000569007 MT-CO2P00403 227 aa13.19□□□□□ -0.3
EDC3-215ENST00000569007 IGHV3-48P01763 117 aa13.19□□□□□ -0.3
EDC3-215ENST00000569007 C8orf88P0DMB2 117 aa13.19□□□□□ -0.3
EDC3-215ENST00000569007 SNCAP37840 140 aa13.19□□□□□ -0.3
EDC3-215ENST00000569007 DHODHQ02127 395 aa13.19□□□□□ -0.3
EDC3-215ENST00000569007 PYDC2Q56P42 97 aa13.19□□□□□ -0.3
EDC3-215ENST00000569007 Q6ZRM9 215 aa13.19□□□□□ -0.3
EDC3-215ENST00000569007 SELENOHQ8IZQ5 122 aaKnown RBP13.19□□□□□ -0.3
EDC3-215ENST00000569007 RBPMSQ93062 196 aaKnown RBP13.19□□□□□ -0.3
EDC3-215ENST00000569007 PINX1Q96BK5 328 aaKnown RBP13.19□□□□□ -0.3
EDC3-215ENST00000569007 TM2D3Q9BRN9 247 aa13.19□□□□□ -0.3
EDC3-215ENST00000569007 ZMAT4Q9H898 229 aa13.19□□□□□ -0.3
EDC3-215ENST00000569007 MRPL27Q9P0M9 148 aaKnown RBP13.19□□□□□ -0.3
EDC3-215ENST00000569007 V9GYH0 126 aa13.19□□□□□ -0.3
EDC3-215ENST00000569007 IGHV3OR16-8A0A075B7F1 116 aa13.18□□□□□ -0.3
EDC3-215ENST00000569007 INS-IGF2F8WCM5 200 aa13.18□□□□□ -0.3
EDC3-215ENST00000569007 NDUFA4O00483 81 aa13.18□□□□□ -0.3
EDC3-215ENST00000569007 CTSGP08311 255 aa13.18□□□□□ -0.3
EDC3-215ENST00000569007 S100A5P33763 92 aa13.18□□□□□ -0.3
EDC3-215ENST00000569007 MFAP4P55083 255 aa13.18□□□□□ -0.3
EDC3-215ENST00000569007 TMEM268Q5VZI3 342 aa13.18□□□□□ -0.3
EDC3-215ENST00000569007 FAM219AQ8IW50 185 aa13.18□□□□□ -0.3
EDC3-215ENST00000569007 TRIM63Q969Q1 353 aa13.18□□□□□ -0.3
EDC3-215ENST00000569007 TMEM230Q96A57 120 aa13.18□□□□□ -0.3
EDC3-215ENST00000569007 SCGB3A2Q96PL1 93 aa13.18□□□□□ -0.3
EDC3-215ENST00000569007 C20orf24Q9BUV8 137 aa13.18□□□□□ -0.3
EDC3-215ENST00000569007 DAZ1Q9NQZ3 744 aaKnown RBP13.18□□□□□ -0.3
EDC3-215ENST00000569007 GAR1Q9NY12 217 aaKnown RBP13.18□□□□□ -0.3
EDC3-215ENST00000569007 DNAH7Q8WXX0 4024 aa13.17□□□□□ -0.3
EDC3-215ENST00000569007 ZNF701M0R085 212 aaPredicted RBP13.17□□□□□ -0.3
EDC3-215ENST00000569007 NUPL2O15504 423 aaKnown RBP13.17□□□□□ -0.3
EDC3-215ENST00000569007 SCAF4O95104 1147 aaKnown RBP13.17□□□□□ -0.3
EDC3-215ENST00000569007 FCGR2BP31994 310 aaPredicted RBP13.17□□□□□ -0.3
EDC3-215ENST00000569007 HOXA1P49639 335 aaPredicted RBP13.17□□□□□ -0.3
EDC3-215ENST00000569007 KLF9Q13886 244 aaPredicted RBP13.17□□□□□ -0.3
EDC3-215ENST00000569007 HAGHQ16775 308 aa13.17□□□□□ -0.3
EDC3-215ENST00000569007 TXN2Q99757 166 aa13.17□□□□□ -0.3
EDC3-215ENST00000569007 WFDC10AQ9H1F0 79 aa13.17□□□□□ -0.3
EDC3-215ENST00000569007 ENY2Q9NPA8 101 aa13.17□□□□□ -0.3
EDC3-215ENST00000569007 KMT2CQ8NEZ4 4911 aaKnown RBP13.16□□□□□ -0.3
EDC3-215ENST00000569007 OR11H12B2RN74 326 aa13.16□□□□□ -0.3
EDC3-215ENST00000569007 ZNF207O43670 478 aaKnown RBP13.16□□□□□ -0.3
EDC3-215ENST00000569007 RNASE2P10153 161 aaKnown RBP13.16□□□□□ -0.3
EDC3-215ENST00000569007 ZNF79Q15937 498 aa13.16□□□□□ -0.3
EDC3-215ENST00000569007 AARDQ4LEZ3 155 aa13.16□□□□□ -0.3
EDC3-215ENST00000569007 CCDC190Q86UF4 302 aa13.16□□□□□ -0.3
EDC3-215ENST00000569007 DEFB125Q8N687 156 aa13.16□□□□□ -0.3
EDC3-215ENST00000569007 GPR146Q96CH1 333 aa13.16□□□□□ -0.3
EDC3-215ENST00000569007 ZNF414Q96IQ9 312 aa13.16□□□□□ -0.3
EDC3-215ENST00000569007 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.16□□□□□ -0.3
EDC3-215ENST00000569007 PRR13Q9NZ81 148 aa13.16□□□□□ -0.3
EDC3-215ENST00000569007 CACNG5Q9UF02 275 aa13.16□□□□□ -0.3
EDC3-215ENST00000569007 KCNIP3Q9Y2W7 256 aa13.16□□□□□ -0.3
EDC3-215ENST00000569007 TMEM56-RWDD3S4R434 201 aa13.16□□□□□ -0.3
EDC3-215ENST00000569007 TRAV25A0A0B4J276 109 aa13.15□□□□□ -0.3
EDC3-215ENST00000569007 AKR1C4P17516 323 aa13.15□□□□□ -0.3
EDC3-215ENST00000569007 FAUP35544 74 aaKnown RBP13.15□□□□□ -0.3
EDC3-215ENST00000569007 AP3S2P59780 193 aa13.15□□□□□ -0.3
EDC3-215ENST00000569007 SPCS3P61009 180 aa13.15□□□□□ -0.3
EDC3-215ENST00000569007 RELQ04864 619 aaPredicted RBP13.15□□□□□ -0.3
EDC3-215ENST00000569007 TMEM187Q14656 261 aa13.15□□□□□ -0.3
EDC3-215ENST00000569007 PVRIGQ6DKI7 326 aa13.15□□□□□ -0.3
EDC3-215ENST00000569007 RBPMS2Q6ZRY4 209 aaKnown RBP13.15□□□□□ -0.3
EDC3-215ENST00000569007 SLC16A13Q7RTY0 426 aa13.15□□□□□ -0.3
EDC3-215ENST00000569007 TOMM5Q8N4H5 51 aa13.15□□□□□ -0.3
EDC3-215ENST00000569007 OR52B4Q8NGK2 314 aa13.15□□□□□ -0.3
EDC3-215ENST00000569007 GALNT14Q96FL9 552 aa13.15□□□□□ -0.3
EDC3-215ENST00000569007 K7EMT4 169 aa13.14□□□□□ -0.31
EDC3-215ENST00000569007 GNG7O60262 68 aa13.14□□□□□ -0.31
EDC3-215ENST00000569007 YIF1AO95070 293 aa13.14□□□□□ -0.31
EDC3-215ENST00000569007 SUB1P53999 127 aaKnown RBP eCLIP13.14□□□□□ -0.31
EDC3-215ENST00000569007 SUPT4H1P63272 117 aaKnown RBP13.14□□□□□ -0.31
EDC3-215ENST00000569007 OR52E5Q8NH55 327 aa13.14□□□□□ -0.31
EDC3-215ENST00000569007 SRD5A3Q9H8P0 318 aa13.14□□□□□ -0.31
EDC3-215ENST00000569007 RBMY1BA6NDE4 496 aaKnown RBP13.13□□□□□ -0.31
EDC3-215ENST00000569007 RBMY1EA6NEQ0 496 aaKnown RBP13.13□□□□□ -0.31
EDC3-215ENST00000569007 C15orf62A8K5M9 175 aa13.13□□□□□ -0.31
EDC3-215ENST00000569007 RBMY1DP0C7P1 496 aaKnown RBP13.13□□□□□ -0.31
EDC3-215ENST00000569007 NPBWR1P48145 328 aa13.13□□□□□ -0.31
EDC3-215ENST00000569007 ANKRD55Q3KP44 614 aa13.13□□□□□ -0.31
EDC3-215ENST00000569007 LINC00322Q6ZN03 302 aaPredicted RBP13.13□□□□□ -0.31
EDC3-215ENST00000569007 DUSP18Q8NEJ0 188 aa13.13□□□□□ -0.31
EDC3-215ENST00000569007 IL22RA2Q969J5 263 aa13.13□□□□□ -0.31
EDC3-215ENST00000569007 SPATA25Q9BR10 227 aa13.13□□□□□ -0.31
EDC3-215ENST00000569007 CORTO00230 105 aa13.12□□□□□ -0.31
EDC3-215ENST00000569007 BSXQ3C1V8 233 aa13.12□□□□□ -0.31
EDC3-215ENST00000569007 SPANXN2Q5MJ10 180 aa13.12□□□□□ -0.31
EDC3-215ENST00000569007 TMED4Q7Z7H5 227 aa13.12□□□□□ -0.31
EDC3-215ENST00000569007 HEYLQ9NQ87 328 aaPredicted RBP13.12□□□□□ -0.31
EDC3-215ENST00000569007 TSPAN4O14817 238 aa13.11□□□□□ -0.31
EDC3-215ENST00000569007 SULT1A3P0DMM9 295 aa13.11□□□□□ -0.31
EDC3-215ENST00000569007 SULT1A4P0DMN0 295 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms