RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 S100GP29377 79 aa11.46□□□□□ -0.57
HERPUD1-215ENST00000568676 NPBWR1P48145 328 aa11.46□□□□□ -0.57
HERPUD1-215ENST00000568676 DEFB131AP59861 70 aa11.46□□□□□ -0.57
HERPUD1-215ENST00000568676 RNF126Q9BV68 326 aa11.46□□□□□ -0.57
HERPUD1-215ENST00000568676 IFT46Q9NQC8 304 aa11.46□□□□□ -0.57
HERPUD1-215ENST00000568676 KIAA1109Q2LD37 5005 aa11.46□□□□□ -0.58
HERPUD1-215ENST00000568676 A0A1W2PS18 150 aa11.45□□□□□ -0.58
HERPUD1-215ENST00000568676 GPR31O00270 319 aa11.45□□□□□ -0.58
HERPUD1-215ENST00000568676 SDC2P34741 201 aa11.45□□□□□ -0.58
HERPUD1-215ENST00000568676 TAS2R46P59540 309 aa11.45□□□□□ -0.58
HERPUD1-215ENST00000568676 PVRIGQ6DKI7 326 aa11.45□□□□□ -0.58
HERPUD1-215ENST00000568676 OR5H6Q8NGV6 325 aa11.45□□□□□ -0.58
HERPUD1-215ENST00000568676 ZNF2Q9BSG1 426 aaPredicted RBP11.45□□□□□ -0.58
HERPUD1-215ENST00000568676 DNAH6Q9C0G6 4158 aa11.44□□□□□ -0.58
HERPUD1-215ENST00000568676 IGHV4-4A0A075B6R2 117 aa11.44□□□□□ -0.58
HERPUD1-215ENST00000568676 IGHV4-28A0A0C4DH34 117 aa11.44□□□□□ -0.58
HERPUD1-215ENST00000568676 ZNF705EA8MWA4 302 aaPredicted RBP11.44□□□□□ -0.58
HERPUD1-215ENST00000568676 XRCC3O43542 346 aa11.44□□□□□ -0.58
HERPUD1-215ENST00000568676 HLA-DMBP28068 263 aa11.44□□□□□ -0.58
HERPUD1-215ENST00000568676 RPL11P62913 178 aaKnown RBP11.44□□□□□ -0.58
HERPUD1-215ENST00000568676 ERHP84090 104 aaKnown RBP11.44□□□□□ -0.58
HERPUD1-215ENST00000568676 PRCDQ00LT1 54 aa11.44□□□□□ -0.58
HERPUD1-215ENST00000568676 IDNKQ5T6J7 187 aa11.44□□□□□ -0.58
HERPUD1-215ENST00000568676 LEMD1Q68G75 181 aa11.44□□□□□ -0.58
HERPUD1-215ENST00000568676 LPCAT3Q6P1A2 487 aa11.44□□□□□ -0.58
HERPUD1-215ENST00000568676 TOMM20LQ6UXN7 152 aa11.44□□□□□ -0.58
HERPUD1-215ENST00000568676 ZNF600Q6ZNG1 722 aa11.44□□□□□ -0.58
HERPUD1-215ENST00000568676 OR6F1Q8NGZ6 308 aa11.44□□□□□ -0.58
HERPUD1-215ENST00000568676 OR4A16Q8NH70 328 aa11.44□□□□□ -0.58
HERPUD1-215ENST00000568676 ST8SIA2Q92186 375 aa11.44□□□□□ -0.58
HERPUD1-215ENST00000568676 GRAMD2BQ96HH9 432 aa11.44□□□□□ -0.58
HERPUD1-215ENST00000568676 IGHV3OR16-13A0A075B7E8 117 aa11.43□□□□□ -0.58
HERPUD1-215ENST00000568676 IGHV3-74A0A0B4J1X5 117 aa11.43□□□□□ -0.58
HERPUD1-215ENST00000568676 A0A1B0GVY2 172 aa11.43□□□□□ -0.58
HERPUD1-215ENST00000568676 P0DMU3 169 aa11.43□□□□□ -0.58
HERPUD1-215ENST00000568676 FAM231AP0DMU4 169 aa11.43□□□□□ -0.58
HERPUD1-215ENST00000568676 FAM231CP0DMU5 169 aa11.43□□□□□ -0.58
HERPUD1-215ENST00000568676 MXD1Q05195 221 aa11.43□□□□□ -0.58
HERPUD1-215ENST00000568676 KCTD21Q4G0X4 260 aa11.43□□□□□ -0.58
HERPUD1-215ENST00000568676 H2BFWTQ7Z2G1 175 aa11.43□□□□□ -0.58
HERPUD1-215ENST00000568676 TRPT1Q86TN4 253 aaKnown RBP11.43□□□□□ -0.58
HERPUD1-215ENST00000568676 SPARTQ8N0X7 666 aa11.43□□□□□ -0.58
HERPUD1-215ENST00000568676 S100A16Q96FQ6 103 aaKnown RBP11.43□□□□□ -0.58
HERPUD1-215ENST00000568676 ANAPC10Q9UM13 185 aa11.43□□□□□ -0.58
HERPUD1-215ENST00000568676 DBX1A6NMT0 343 aa11.42□□□□□ -0.58
HERPUD1-215ENST00000568676 CORTO00230 105 aa11.42□□□□□ -0.58
HERPUD1-215ENST00000568676 SCGB2A1O75556 95 aa11.42□□□□□ -0.58
HERPUD1-215ENST00000568676 AMBPP02760 352 aa11.42□□□□□ -0.58
HERPUD1-215ENST00000568676 FCER2P06734 321 aa11.42□□□□□ -0.58
HERPUD1-215ENST00000568676 RBMY1A1P0DJD3 496 aaKnown RBP11.42□□□□□ -0.58
HERPUD1-215ENST00000568676 RBMY1CP0DJD4 496 aa11.42□□□□□ -0.58
HERPUD1-215ENST00000568676 NPPCP23582 126 aa11.42□□□□□ -0.58
HERPUD1-215ENST00000568676 RFX2P48378 723 aa11.42□□□□□ -0.58
HERPUD1-215ENST00000568676 HSPE1P61604 102 aaKnown RBP11.42□□□□□ -0.58
HERPUD1-215ENST00000568676 RBMY1FQ15415 496 aaKnown RBP11.42□□□□□ -0.58
HERPUD1-215ENST00000568676 Q6ZTC4 211 aa11.42□□□□□ -0.58
HERPUD1-215ENST00000568676 CROCCP3Q8IVE0 287 aa11.42□□□□□ -0.58
HERPUD1-215ENST00000568676 OR5H2Q8NGV7 314 aa11.42□□□□□ -0.58
HERPUD1-215ENST00000568676 PINX1Q96BK5 328 aaKnown RBP11.42□□□□□ -0.58
HERPUD1-215ENST00000568676 RABAC1Q9UI14 185 aa11.42□□□□□ -0.58
HERPUD1-215ENST00000568676 PUS1Q9Y606 427 aaKnown RBP eCLIP11.42□□□□□ -0.58
HERPUD1-215ENST00000568676 NAT1P18440 290 aa11.41□□□□□ -0.58
HERPUD1-215ENST00000568676 POM121L12Q8N7R1 296 aa11.41□□□□□ -0.58
HERPUD1-215ENST00000568676 NARS2Q96I59 477 aaKnown RBP11.41□□□□□ -0.58
HERPUD1-215ENST00000568676 SEC22AQ96IW7 307 aa11.41□□□□□ -0.58
HERPUD1-215ENST00000568676 ZFAND3Q9H8U3 227 aa11.41□□□□□ -0.58
HERPUD1-215ENST00000568676 MEIS3P1A6NDR6 274 aa11.4□□□□□ -0.58
HERPUD1-215ENST00000568676 INS-IGF2F8WCM5 200 aa11.4□□□□□ -0.58
HERPUD1-215ENST00000568676 K7EQG2 157 aa11.4□□□□□ -0.58
HERPUD1-215ENST00000568676 APOHP02749 345 aaPredicted RBP11.4□□□□□ -0.58
HERPUD1-215ENST00000568676 GIG44P09565 113 aaPredicted RBP11.4□□□□□ -0.58
HERPUD1-215ENST00000568676 SNCAP37840 140 aa11.4□□□□□ -0.58
HERPUD1-215ENST00000568676 EIF2B2P49770 351 aaKnown RBP11.4□□□□□ -0.58
HERPUD1-215ENST00000568676 LILRB2Q8N423 598 aa11.4□□□□□ -0.58
HERPUD1-215ENST00000568676 METTL26Q96S19 204 aa11.4□□□□□ -0.58
HERPUD1-215ENST00000568676 FXYD6Q9H0Q3 95 aa11.4□□□□□ -0.58
HERPUD1-215ENST00000568676 TBC1D24Q9ULP9 559 aa11.4□□□□□ -0.58
HERPUD1-215ENST00000568676 X6R8D5 127 aa11.4□□□□□ -0.58
HERPUD1-215ENST00000568676 PRSS29PA6NIE9 313 aa11.39□□□□□ -0.59
HERPUD1-215ENST00000568676 TNFAIP8O95379 198 aa11.39□□□□□ -0.59
HERPUD1-215ENST00000568676 TMEM50AO95807 157 aa11.39□□□□□ -0.59
HERPUD1-215ENST00000568676 IGHV3-48P01763 117 aa11.39□□□□□ -0.59
HERPUD1-215ENST00000568676 PMP2P02689 132 aa11.39□□□□□ -0.59
HERPUD1-215ENST00000568676 CLEC2LP0C7M8 214 aa11.39□□□□□ -0.59
HERPUD1-215ENST00000568676 SUB1P53999 127 aaKnown RBP eCLIP11.39□□□□□ -0.59
HERPUD1-215ENST00000568676 FAM24BQ8N5W8 94 aa11.39□□□□□ -0.59
HERPUD1-215ENST00000568676 NDUFAF3Q9BU61 184 aa11.39□□□□□ -0.59
HERPUD1-215ENST00000568676 C1QTNF4Q9BXJ3 329 aa11.39□□□□□ -0.59
HERPUD1-215ENST00000568676 ELOA3CA0A087WX78 387 aaPredicted RBP11.38□□□□□ -0.59
HERPUD1-215ENST00000568676 DEFB131BA0A096LNP1 70 aa11.38□□□□□ -0.59
HERPUD1-215ENST00000568676 NPY1RP25929 384 aa11.38□□□□□ -0.59
HERPUD1-215ENST00000568676 CRYBB3P26998 211 aa11.38□□□□□ -0.59
HERPUD1-215ENST00000568676 NUTF2P61970 127 aaKnown RBP11.38□□□□□ -0.59
HERPUD1-215ENST00000568676 UBE2NLQ5JXB2 153 aa11.38□□□□□ -0.59
HERPUD1-215ENST00000568676 TMEM69Q5SWH9 247 aa11.38□□□□□ -0.59
HERPUD1-215ENST00000568676 TBC1D26Q86UD7 250 aa11.38□□□□□ -0.59
HERPUD1-215ENST00000568676 STXBP6Q8NFX7 210 aa11.38□□□□□ -0.59
HERPUD1-215ENST00000568676 VCX3AQ9NNX9 186 aa11.38□□□□□ -0.59
HERPUD1-215ENST00000568676 IGHV3-66A0A0C4DH42 116 aa11.37□□□□□ -0.59
HERPUD1-215ENST00000568676 LOC100506127A0A0U1RQW1 187 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 214.9 ms