RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 C14orf166Q9Y224 244 aaKnown RBP22.07■■□□□ 1.12
RAB40C-211ENST00000568586 K7EMT4 169 aa22.06■■□□□ 1.12
RAB40C-211ENST00000568586 ST8SIA3O43173 380 aa22.06■■□□□ 1.12
RAB40C-211ENST00000568586 NAA60Q9H7X0 242 aa22.06■■□□□ 1.12
RAB40C-211ENST00000568586 DAZ1Q9NQZ3 744 aaKnown RBP22.06■■□□□ 1.12
RAB40C-211ENST00000568586 A0A0G2JRQ6 117 aa22.05■■□□□ 1.12
RAB40C-211ENST00000568586 TEX13DA0A0J9YY54 714 aaPredicted RBP22.05■■□□□ 1.12
RAB40C-211ENST00000568586 FABP12A6NFH5 140 aa22.05■■□□□ 1.12
RAB40C-211ENST00000568586 BTNL8Q6UX41 500 aa22.05■■□□□ 1.12
RAB40C-211ENST00000568586 FAM219AQ8IW50 185 aa22.05■■□□□ 1.12
RAB40C-211ENST00000568586 OR51S1Q8NGJ8 323 aa22.05■■□□□ 1.12
RAB40C-211ENST00000568586 RRNAD1Q96FB5 475 aaKnown RBP22.05■■□□□ 1.12
RAB40C-211ENST00000568586 CRYM-AS1A6NIL9 109 aa22.04■■□□□ 1.12
RAB40C-211ENST00000568586 C3orf84H3BNL1 204 aa22.04■■□□□ 1.12
RAB40C-211ENST00000568586 MT-CO2P00403 227 aa22.04■■□□□ 1.12
RAB40C-211ENST00000568586 OR5AC1P0C628 307 aa22.04■■□□□ 1.12
RAB40C-211ENST00000568586 MFAP4P55083 255 aa22.04■■□□□ 1.12
RAB40C-211ENST00000568586 DHODHQ02127 395 aa22.04■■□□□ 1.12
RAB40C-211ENST00000568586 Q56UQ5 140 aa22.04■■□□□ 1.12
RAB40C-211ENST00000568586 MISP3Q96FF7 219 aa22.04■■□□□ 1.12
RAB40C-211ENST00000568586 SPATA25Q9BR10 227 aa22.04■■□□□ 1.12
RAB40C-211ENST00000568586 OR11H12B2RN74 326 aa22.03■■□□□ 1.12
RAB40C-211ENST00000568586 Q6ZRM9 215 aa22.03■■□□□ 1.12
RAB40C-211ENST00000568586 LHFPL5Q8TAF8 219 aa22.03■■□□□ 1.12
RAB40C-211ENST00000568586 CITED4Q96RK1 184 aa22.03■■□□□ 1.12
RAB40C-211ENST00000568586 RBM38Q9H0Z9 239 aaKnown RBP22.03■■□□□ 1.12
RAB40C-211ENST00000568586 C15orf62A8K5M9 175 aa22.02■■□□□ 1.12
RAB40C-211ENST00000568586 ANKRD55Q3KP44 614 aa22.02■■□□□ 1.12
RAB40C-211ENST00000568586 SLC16A13Q7RTY0 426 aa22.02■■□□□ 1.12
RAB40C-211ENST00000568586 DEFB125Q8N687 156 aa22.02■■□□□ 1.12
RAB40C-211ENST00000568586 UBAC2Q8NBM4 344 aa22.02■■□□□ 1.12
RAB40C-211ENST00000568586 RBPMSQ93062 196 aaKnown RBP22.02■■□□□ 1.12
RAB40C-211ENST00000568586 SCP2D1Q9UJQ7 156 aa22.02■■□□□ 1.12
RAB40C-211ENST00000568586 TMEM56-RWDD3S4R434 201 aa22.02■■□□□ 1.12
RAB40C-211ENST00000568586 IFNA17P01571 189 aa22.01■■□□□ 1.11
RAB40C-211ENST00000568586 RELQ04864 619 aaPredicted RBP22.01■■□□□ 1.11
RAB40C-211ENST00000568586 SPINK9Q5DT21 86 aa22.01■■□□□ 1.11
RAB40C-211ENST00000568586 SELENOHQ8IZQ5 122 aaKnown RBP22.01■■□□□ 1.11
RAB40C-211ENST00000568586 SLC35G3Q8N808 338 aa22.01■■□□□ 1.11
RAB40C-211ENST00000568586 OR52E5Q8NH55 327 aa22.01■■□□□ 1.11
RAB40C-211ENST00000568586 GALNT14Q96FL9 552 aa22.01■■□□□ 1.11
RAB40C-211ENST00000568586 SELENOKQ9Y6D0 94 aa22.01■■□□□ 1.11
RAB40C-211ENST00000568586 RBMY1BA6NDE4 496 aaKnown RBP22■■□□□ 1.11
RAB40C-211ENST00000568586 RBMY1EA6NEQ0 496 aaKnown RBP22■■□□□ 1.11
RAB40C-211ENST00000568586 NUPL2O15504 423 aaKnown RBP22■■□□□ 1.11
RAB40C-211ENST00000568586 RBMY1DP0C7P1 496 aaKnown RBP22■■□□□ 1.11
RAB40C-211ENST00000568586 SNCAP37840 140 aa22■■□□□ 1.11
RAB40C-211ENST00000568586 ETV6P41212 452 aa22■■□□□ 1.11
RAB40C-211ENST00000568586 BSXQ3C1V8 233 aa22■■□□□ 1.11
RAB40C-211ENST00000568586 OR10C1Q96KK4 312 aa22■■□□□ 1.11
RAB40C-211ENST00000568586 SCGB3A2Q96PL1 93 aa22■■□□□ 1.11
RAB40C-211ENST00000568586 PDCD10Q9BUL8 212 aa22■■□□□ 1.11
RAB40C-211ENST00000568586 WFDC10AQ9H1F0 79 aa22■■□□□ 1.11
RAB40C-211ENST00000568586 SCAF4O95104 1147 aaKnown RBP21.99■■□□□ 1.11
RAB40C-211ENST00000568586 RNASE2P10153 161 aaKnown RBP21.99■■□□□ 1.11
RAB40C-211ENST00000568586 RBPMS2Q6ZRY4 209 aaKnown RBP21.99■■□□□ 1.11
RAB40C-211ENST00000568586 MUC7Q8TAX7 377 aa21.99■■□□□ 1.11
RAB40C-211ENST00000568586 SPAG8Q99932 426 aaPredicted RBP21.99■■□□□ 1.11
RAB40C-211ENST00000568586 EDA2RQ9HAV5 297 aa21.99■■□□□ 1.11
RAB40C-211ENST00000568586 CTNNBIP1Q9NSA3 81 aaPredicted RBP21.99■■□□□ 1.11
RAB40C-211ENST00000568586 ZNF701M0R085 212 aaPredicted RBP21.98■■□□□ 1.11
RAB40C-211ENST00000568586 TSPAN4O14817 238 aa21.98■■□□□ 1.11
RAB40C-211ENST00000568586 SPCS3P61009 180 aa21.98■■□□□ 1.11
RAB40C-211ENST00000568586 OR52B4Q8NGK2 314 aa21.98■■□□□ 1.11
RAB40C-211ENST00000568586 IL22RA2Q969J5 263 aa21.98■■□□□ 1.11
RAB40C-211ENST00000568586 TRIM63Q969Q1 353 aa21.98■■□□□ 1.11
RAB40C-211ENST00000568586 TMEM230Q96A57 120 aa21.98■■□□□ 1.11
RAB40C-211ENST00000568586 SRD5A3Q9H8P0 318 aa21.98■■□□□ 1.11
RAB40C-211ENST00000568586 V9GYH0 126 aa21.98■■□□□ 1.11
RAB40C-211ENST00000568586 SUB1P53999 127 aaKnown RBP eCLIP21.97■■□□□ 1.11
RAB40C-211ENST00000568586 KLF9Q13886 244 aaPredicted RBP21.97■■□□□ 1.11
RAB40C-211ENST00000568586 C20orf24Q9BUV8 137 aa21.97■■□□□ 1.11
RAB40C-211ENST00000568586 HIPK2Q9H2X6 1198 aa21.97■■□□□ 1.11
RAB40C-211ENST00000568586 CORTO00230 105 aa21.96■■□□□ 1.11
RAB40C-211ENST00000568586 TMEM187Q14656 261 aa21.96■■□□□ 1.11
RAB40C-211ENST00000568586 RNASE11Q8TAA1 199 aaKnown RBP21.96■■□□□ 1.11
RAB40C-211ENST00000568586 PINX1Q96BK5 328 aaKnown RBP21.96■■□□□ 1.11
RAB40C-211ENST00000568586 GPR146Q96CH1 333 aa21.96■■□□□ 1.11
RAB40C-211ENST00000568586 SMPXQ9UHP9 88 aa21.96■■□□□ 1.11
RAB40C-211ENST00000568586 KCNIP3Q9Y2W7 256 aa21.96■■□□□ 1.11
RAB40C-211ENST00000568586 IGHV3-48P01763 117 aa21.95■■□□□ 1.1
RAB40C-211ENST00000568586 NPBWR1P48145 328 aa21.95■■□□□ 1.1
RAB40C-211ENST00000568586 TMEM268Q5VZI3 342 aa21.95■■□□□ 1.1
RAB40C-211ENST00000568586 LAMTOR1Q6IAA8 161 aa21.95■■□□□ 1.1
RAB40C-211ENST00000568586 DUSP18Q8NEJ0 188 aa21.95■■□□□ 1.1
RAB40C-211ENST00000568586 RYR3Q15413 4870 aa21.94■■□□□ 1.1
RAB40C-211ENST00000568586 GNG7O60262 68 aa21.94■■□□□ 1.1
RAB40C-211ENST00000568586 HOXA1P49639 335 aaPredicted RBP21.94■■□□□ 1.1
RAB40C-211ENST00000568586 ZNF79Q15937 498 aa21.94■■□□□ 1.1
RAB40C-211ENST00000568586 CCDC190Q86UF4 302 aa21.94■■□□□ 1.1
RAB40C-211ENST00000568586 DEDD2Q8WXF8 326 aa21.94■■□□□ 1.1
RAB40C-211ENST00000568586 ENY2Q9NPA8 101 aa21.94■■□□□ 1.1
RAB40C-211ENST00000568586 MCUBQ9NWR8 336 aa21.94■■□□□ 1.1
RAB40C-211ENST00000568586 CSMD3Q7Z407 3707 aa21.94■■□□□ 1.1
RAB40C-211ENST00000568586 IGHV3OR16-8A0A075B7F1 116 aa21.93■■□□□ 1.1
RAB40C-211ENST00000568586 IGHV7-4-1A0A0J9YVY3 117 aa21.93■■□□□ 1.1
RAB40C-211ENST00000568586 CCDC160A6NGH7 325 aa21.93■■□□□ 1.1
RAB40C-211ENST00000568586 SUPT4H1P63272 117 aaKnown RBP21.93■■□□□ 1.1
RAB40C-211ENST00000568586 CACNG5Q9UF02 275 aa21.93■■□□□ 1.1
RAB40C-211ENST00000568586 CACFD1Q9UGQ2 172 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms