RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 SRFP11831 508 aa9.06□□□□□ -0.96
PALB2-206ENST00000568219 IL11RAQ14626 422 aa9.06□□□□□ -0.96
PALB2-206ENST00000568219 CT45A1Q5HYN5 189 aa9.06□□□□□ -0.96
PALB2-206ENST00000568219 OR10J3Q5JRS4 329 aa9.06□□□□□ -0.96
PALB2-206ENST00000568219 HCP5Q6MZN7 132 aa9.06□□□□□ -0.96
PALB2-206ENST00000568219 C6orf15Q6UXA7 325 aaPredicted RBP9.06□□□□□ -0.96
PALB2-206ENST00000568219 CT45A3Q8NHU0 189 aa9.06□□□□□ -0.96
PALB2-206ENST00000568219 CHRNA10Q9GZZ6 450 aa9.06□□□□□ -0.96
PALB2-206ENST00000568219 TRGV10A0A0A0MS01 117 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 IZUMO1RA6ND01 250 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 A8MWL6 223 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 KLRC4-KLRK1H3BQV0 150 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 CORTO00230 105 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 CSN1S1P47710 185 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 FXYD7P58549 80 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 Q0VG73 95 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 FBXW9Q5XUX1 488 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 OR10X1Q8NGY0 326 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 NPIPB3Q92617 1050 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 HSPB8Q9UJY1 196 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.05□□□□□ -0.96
PALB2-206ENST00000568219 IGHV1-69-2A0A0G2JMI3 117 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 hADV38S2A0JD32 116 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 MLNRO43193 412 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 ADH4P08319 380 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 CT45A10P0DMU9 189 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 EPHA8P29322 1005 aaPredicted RBP9.05□□□□□ -0.96
PALB2-206ENST00000568219 MOGAT3Q86VF5 341 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 METRNQ9UJH8 293 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 PLXNB1O43157 2135 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 IGLV3-12A0A075B6K2 115 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 PRSS1P07477 247 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 SUB1P53999 127 aaKnown RBP eCLIP9.05□□□□□ -0.96
PALB2-206ENST00000568219 OR2M7Q8NG81 312 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 SMIM12Q96EX1 92 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 FGF23Q9GZV9 251 aaPredicted RBP9.05□□□□□ -0.96
PALB2-206ENST00000568219 TRAV30A0A087WSZ9 112 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 GPR183P32249 361 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 MPV17P39210 176 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 SMAGPQ0VAQ4 97 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 PSG7Q13046 419 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 TMEM144Q7Z5S9 345 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 C18orf32Q8TCD1 76 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 KLF14Q8TD94 323 aaPredicted RBP9.05□□□□□ -0.96
PALB2-206ENST00000568219 FAM168AQ92567 244 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 THYN1Q9P016 225 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 RNF114Q9Y508 228 aa9.05□□□□□ -0.96
PALB2-206ENST00000568219 PINLYPA6NC86 204 aa9.04□□□□□ -0.96
PALB2-206ENST00000568219 GOSR1O95249 250 aa9.04□□□□□ -0.96
PALB2-206ENST00000568219 TMEM136Q6ZRR5 245 aa9.04□□□□□ -0.96
PALB2-206ENST00000568219 GGNQ86UU5 652 aa9.04□□□□□ -0.96
PALB2-206ENST00000568219 ZNF576Q9H609 170 aa9.04□□□□□ -0.96
PALB2-206ENST00000568219 UBE2ZQ9H832 354 aaPredicted RBP9.04□□□□□ -0.96
PALB2-206ENST00000568219 OSTCQ9NRP0 149 aa9.04□□□□□ -0.96
PALB2-206ENST00000568219 RBP4P02753 201 aa9.04□□□□□ -0.96
PALB2-206ENST00000568219 LYZP61626 148 aa9.04□□□□□ -0.96
PALB2-206ENST00000568219 PEAR1Q5VY43 1037 aaPredicted RBP9.04□□□□□ -0.96
PALB2-206ENST00000568219 HARBI1Q96MB7 349 aa9.04□□□□□ -0.96
PALB2-206ENST00000568219 CXXC4Q9H2H0 198 aa9.04□□□□□ -0.96
PALB2-206ENST00000568219 THADAQ6YHU6 1953 aa9.04□□□□□ -0.96
PALB2-206ENST00000568219 J3QR89 54 aa9.04□□□□□ -0.96
PALB2-206ENST00000568219 C18orf15Q96N68 181 aa9.04□□□□□ -0.96
PALB2-206ENST00000568219 IGHV3-72A0A0B4J1Y9 119 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 A0A1W2PRE2 83 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 ZNF503-AS2A6NEH8 195 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 M0R1B8 84 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 ZNF207O43670 478 aaKnown RBP9.03□□□□□ -0.96
PALB2-206ENST00000568219 NDUFB8O95169 186 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 MOSP00540 346 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 MEOX1P50221 254 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 HBBP68871 147 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 PSG9Q00887 426 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 RNPS1Q15287 305 aaKnown RBP9.03□□□□□ -0.96
PALB2-206ENST00000568219 DNASE2BQ8WZ79 361 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 SNRNP40Q96DI7 357 aaKnown RBP9.03□□□□□ -0.96
PALB2-206ENST00000568219 IMMP1LQ96LU5 166 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 SIT1Q9Y3P8 196 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 V9GYV3 84 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 MED12LQ86YW9 2145 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 TRAV9-1A0A075B6T8 112 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 TRGV5A0A0B4J1U4 118 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 C1orf185Q5T7R7 199 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 Q6P435 159 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 Q6ZS49 121 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 RAB9BQ9NP90 201 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 TP53TG3Q9ULZ0 132 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 MRPS16Q9Y3D3 137 aaKnown RBP9.03□□□□□ -0.96
PALB2-206ENST00000568219 CELSR3Q9NYQ7 3312 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 YLPM1P49750 1951 aaKnown RBP9.03□□□□□ -0.96
PALB2-206ENST00000568219 CDKN1BP46527 198 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 CCL11P51671 97 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 BHLHA15Q7RTS1 189 aaPredicted RBP9.03□□□□□ -0.96
PALB2-206ENST00000568219 ZGRF1Q86YA3 2104 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 PNKDQ8N490 385 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 NUP35Q8NFH5 326 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 SRSF12Q8WXF0 261 aaKnown RBP9.03□□□□□ -0.96
PALB2-206ENST00000568219 ADTRPQ96IZ2 230 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 GUCD1Q96NT3 240 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 ASCL2Q99929 193 aa9.03□□□□□ -0.96
PALB2-206ENST00000568219 AP5S1Q9NUS5 200 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms