RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 CHRDL1Q9BU40 450 aa6.17□□□□□ -1.42
HDGFL3-205ENST00000568129 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.17□□□□□ -1.42
HDGFL3-205ENST00000568129 C21orf62Q9NYP8 219 aa6.17□□□□□ -1.42
HDGFL3-205ENST00000568129 MRPL27Q9P0M9 148 aaKnown RBP6.17□□□□□ -1.42
HDGFL3-205ENST00000568129 CACFD1Q9UGQ2 172 aa6.17□□□□□ -1.42
HDGFL3-205ENST00000568129 KCNIP3Q9Y2W7 256 aa6.17□□□□□ -1.42
HDGFL3-205ENST00000568129 S4R3C0 116 aa6.17□□□□□ -1.42
HDGFL3-205ENST00000568129 TRAV25A0A0B4J276 109 aa6.16□□□□□ -1.42
HDGFL3-205ENST00000568129 A0A0B4J2A0 478 aa6.16□□□□□ -1.42
HDGFL3-205ENST00000568129 C15orf62A8K5M9 175 aa6.16□□□□□ -1.42
HDGFL3-205ENST00000568129 LY86O95711 162 aa6.16□□□□□ -1.42
HDGFL3-205ENST00000568129 FRMD6-AS1P0C7T7 363 aa6.16□□□□□ -1.42
HDGFL3-205ENST00000568129 RNASE2P10153 161 aaKnown RBP6.16□□□□□ -1.42
HDGFL3-205ENST00000568129 GPR183P32249 361 aa6.16□□□□□ -1.42
HDGFL3-205ENST00000568129 FAUP35544 74 aaKnown RBP6.16□□□□□ -1.42
HDGFL3-205ENST00000568129 MFAP4P55083 255 aa6.16□□□□□ -1.42
HDGFL3-205ENST00000568129 TRIM16LQ309B1 348 aa6.16□□□□□ -1.42
HDGFL3-205ENST00000568129 PYDC2Q56P42 97 aa6.16□□□□□ -1.42
HDGFL3-205ENST00000568129 C11orf87Q6NUJ2 197 aa6.16□□□□□ -1.42
HDGFL3-205ENST00000568129 LINC00299Q6ZSB3 139 aa6.16□□□□□ -1.42
HDGFL3-205ENST00000568129 SGPP2Q8IWX5 399 aa6.16□□□□□ -1.42
HDGFL3-205ENST00000568129 TOMM5Q8N4H5 51 aa6.16□□□□□ -1.42
HDGFL3-205ENST00000568129 RRNAD1Q96FB5 475 aaKnown RBP6.16□□□□□ -1.42
HDGFL3-205ENST00000568129 TM2D3Q9BRN9 247 aa6.16□□□□□ -1.42
HDGFL3-205ENST00000568129 HINT2Q9BX68 163 aa6.16□□□□□ -1.42
HDGFL3-205ENST00000568129 PLEKHA3Q9HB20 300 aa6.16□□□□□ -1.42
HDGFL3-205ENST00000568129 PALMDQ9NP74 551 aa6.16□□□□□ -1.42
HDGFL3-205ENST00000568129 MLXQ9UH92 298 aa6.16□□□□□ -1.42
HDGFL3-205ENST00000568129 SHPKQ9UHJ6 478 aa6.16□□□□□ -1.42
HDGFL3-205ENST00000568129 UFC1Q9Y3C8 167 aa6.16□□□□□ -1.42
HDGFL3-205ENST00000568129 PIGBOS1A0A0B4J2F0 54 aa6.15□□□□□ -1.42
HDGFL3-205ENST00000568129 DUXBA0A1W2PPF3 345 aa6.15□□□□□ -1.42
HDGFL3-205ENST00000568129 CCDC160A6NGH7 325 aa6.15□□□□□ -1.42
HDGFL3-205ENST00000568129 OR2T8A6NH00 312 aa6.15□□□□□ -1.42
HDGFL3-205ENST00000568129 CORTO00230 105 aa6.15□□□□□ -1.42
HDGFL3-205ENST00000568129 PITX3O75364 302 aa6.15□□□□□ -1.42
HDGFL3-205ENST00000568129 MT-CO2P00403 227 aa6.15□□□□□ -1.42
HDGFL3-205ENST00000568129 IGHV4-30-4P0DP06 118 aa6.15□□□□□ -1.42
HDGFL3-205ENST00000568129 SLC25A6P12236 298 aa6.15□□□□□ -1.42
HDGFL3-205ENST00000568129 AKR1C2P52895 323 aa6.15□□□□□ -1.42
HDGFL3-205ENST00000568129 SUB1P53999 127 aaKnown RBP eCLIP6.15□□□□□ -1.42
HDGFL3-205ENST00000568129 BAK1Q16611 211 aa6.15□□□□□ -1.42
HDGFL3-205ENST00000568129 TM4SF20Q53R12 229 aa6.15□□□□□ -1.42
HDGFL3-205ENST00000568129 C2orf83Q53S99 150 aa6.15□□□□□ -1.42
HDGFL3-205ENST00000568129 TMEM128Q5BJH2 165 aa6.15□□□□□ -1.42
HDGFL3-205ENST00000568129 SPANXN2Q5MJ10 180 aa6.15□□□□□ -1.42
HDGFL3-205ENST00000568129 TMEM268Q5VZI3 342 aa6.15□□□□□ -1.42
HDGFL3-205ENST00000568129 UXS1Q8NBZ7 420 aa6.15□□□□□ -1.42
HDGFL3-205ENST00000568129 DAZ1Q9NQZ3 744 aaKnown RBP6.15□□□□□ -1.42
HDGFL3-205ENST00000568129 TENM3Q9P273 2699 aa6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 A0A1B0GU03 582 aa6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 ZNF320A2RRD8 509 aa6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 NAP1L6A6NFF2 107 aa6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 TMEM50AO95807 157 aa6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 IFNA17P01571 189 aa6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 HTR2BP41595 481 aa6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 CCR6P51684 374 aa6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 ATP5IP56385 69 aaPredicted RBP6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 UBE2MP61081 183 aaKnown RBP6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 SRPXP78539 464 aa6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 RELQ04864 619 aaPredicted RBP6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 ZNF57Q68EA5 555 aaPredicted RBP6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 TMEM61Q8N0U2 210 aa6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 LGI3Q8N145 548 aa6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 SLC35G3Q8N808 338 aa6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 OR4X1Q8NH49 305 aa6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 TMEM170AQ8WVE7 144 aa6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 WWC2-AS2Q96NR7 200 aa6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 FAM110AQ9BQ89 295 aa6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 FNDC4Q9H6D8 234 aaPredicted RBP6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 MCUBQ9NWR8 336 aa6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 HSPB7Q9UBY9 170 aa6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 CACNG5Q9UF02 275 aa6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 U3KQK5 164 aa6.14□□□□□ -1.43
HDGFL3-205ENST00000568129 STAB2Q8WWQ8 2551 aa6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 IGHV3-21A0A0B4J1V1 117 aa6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 TSPAN4O14817 238 aa6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 NUPL2O15504 423 aaKnown RBP6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 CD7P09564 240 aa6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 SULT1A3P0DMM9 295 aa6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 SULT1A4P0DMN0 295 aa6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 ANXA3P12429 323 aa6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 AKR1C4P17516 323 aa6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 SNCAP37840 140 aa6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 NPBWR1P48145 328 aa6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 RBMS2Q15434 407 aaKnown RBP6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 FAM90A2PQ658T7 463 aa6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 LYZL2Q7Z4W2 148 aa6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 GTSCR1Q86UQ5 136 aa6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 TMEM116Q8NCL8 245 aa6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 DUSP18Q8NEJ0 188 aa6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 RNASEH2CQ8TDP1 164 aaKnown RBP6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 DYNLRB2Q8TF09 96 aa6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 CACNG8Q8WXS5 425 aa6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 MISP3Q96FF7 219 aa6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 WDR89Q96FK6 387 aaPredicted RBP6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 NEURL2Q9BR09 285 aa6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 C7orf50Q9BRJ6 194 aaKnown RBP6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 PDCD10Q9BUL8 212 aa6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 SMPXQ9UHP9 88 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms