RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 NAA50Q9GZZ1 169 aaKnown RBP11.15□□□□□ -0.62
SCAMP2-209ENST00000567638 EXTL2Q9UBQ6 330 aa11.15□□□□□ -0.62
SCAMP2-209ENST00000567638 IGHV3-49A0A0A0MS15 119 aa11.14□□□□□ -0.63
SCAMP2-209ENST00000567638 A0A0J9YWU9 116 aa11.14□□□□□ -0.63
SCAMP2-209ENST00000567638 CD3DP04234 171 aa11.14□□□□□ -0.63
SCAMP2-209ENST00000567638 P0C879 139 aa11.14□□□□□ -0.63
SCAMP2-209ENST00000567638 ZNF182P17025 639 aaPredicted RBP11.14□□□□□ -0.63
SCAMP2-209ENST00000567638 TBPP20226 339 aa11.14□□□□□ -0.63
SCAMP2-209ENST00000567638 TNFRSF9Q07011 255 aa11.14□□□□□ -0.63
SCAMP2-209ENST00000567638 SPINK9Q5DT21 86 aa11.14□□□□□ -0.63
SCAMP2-209ENST00000567638 LYG2Q86SG7 212 aa11.14□□□□□ -0.63
SCAMP2-209ENST00000567638 STPG3Q8N7X2 389 aa11.14□□□□□ -0.63
SCAMP2-209ENST00000567638 GALNT14Q96FL9 552 aa11.14□□□□□ -0.63
SCAMP2-209ENST00000567638 MTFP1Q9UDX5 166 aa11.14□□□□□ -0.63
SCAMP2-209ENST00000567638 DNAH1Q9P2D7 4330 aa11.14□□□□□ -0.63
SCAMP2-209ENST00000567638 TRAV14DV4A0A0A6YYC5 116 aa11.13□□□□□ -0.63
SCAMP2-209ENST00000567638 C3orf85A0A1B0GTC6 90 aa11.13□□□□□ -0.63
SCAMP2-209ENST00000567638 SMIM18P0DKX4 95 aa11.13□□□□□ -0.63
SCAMP2-209ENST00000567638 RPL35AP18077 110 aaKnown RBP11.13□□□□□ -0.63
SCAMP2-209ENST00000567638 AKR1C2P52895 323 aa11.13□□□□□ -0.63
SCAMP2-209ENST00000567638 PPP5CP53041 499 aa11.13□□□□□ -0.63
SCAMP2-209ENST00000567638 SLC35G3Q8N808 338 aa11.13□□□□□ -0.63
SCAMP2-209ENST00000567638 RNF183Q96D59 192 aa11.13□□□□□ -0.63
SCAMP2-209ENST00000567638 MAP6D1Q9H9H5 199 aa11.13□□□□□ -0.63
SCAMP2-209ENST00000567638 A0A0B4J293 547 aa11.12□□□□□ -0.63
SCAMP2-209ENST00000567638 CXorf65A6NEN9 183 aa11.12□□□□□ -0.63
SCAMP2-209ENST00000567638 INS-IGF2F8WCM5 200 aa11.12□□□□□ -0.63
SCAMP2-209ENST00000567638 ST8SIA3O43173 380 aa11.12□□□□□ -0.63
SCAMP2-209ENST00000567638 ATG12O94817 140 aa11.12□□□□□ -0.63
SCAMP2-209ENST00000567638 SNCAP37840 140 aa11.12□□□□□ -0.63
SCAMP2-209ENST00000567638 EWSR1Q01844 656 aaKnown RBP eCLIP11.12□□□□□ -0.63
SCAMP2-209ENST00000567638 PMS2P11Q13670 270 aa11.12□□□□□ -0.63
SCAMP2-209ENST00000567638 FAM90A2PQ658T7 463 aa11.12□□□□□ -0.63
SCAMP2-209ENST00000567638 APRG1Q8IVJ8 170 aa11.12□□□□□ -0.63
SCAMP2-209ENST00000567638 CCDC71LQ8N9Z2 235 aa11.12□□□□□ -0.63
SCAMP2-209ENST00000567638 DUSP18Q8NEJ0 188 aa11.12□□□□□ -0.63
SCAMP2-209ENST00000567638 OR4D10Q8NGI6 311 aa11.12□□□□□ -0.63
SCAMP2-209ENST00000567638 C15orf40Q8WUR7 153 aa11.12□□□□□ -0.63
SCAMP2-209ENST00000567638 ABHD1Q96SE0 405 aa11.12□□□□□ -0.63
SCAMP2-209ENST00000567638 GINS3Q9BRX5 216 aa11.12□□□□□ -0.63
SCAMP2-209ENST00000567638 C6orf62Q9GZU0 229 aaPredicted RBP11.12□□□□□ -0.63
SCAMP2-209ENST00000567638 IGKV3-7A0A075B6H7 116 aa11.11□□□□□ -0.63
SCAMP2-209ENST00000567638 IGHV3OR16-13A0A075B7E8 117 aa11.11□□□□□ -0.63
SCAMP2-209ENST00000567638 IGHV3-74A0A0B4J1X5 117 aa11.11□□□□□ -0.63
SCAMP2-209ENST00000567638 NUPR2A6NF83 97 aa11.11□□□□□ -0.63
SCAMP2-209ENST00000567638 CORTO00230 105 aa11.11□□□□□ -0.63
SCAMP2-209ENST00000567638 IFNA17P01571 189 aa11.11□□□□□ -0.63
SCAMP2-209ENST00000567638 CD74P04233 296 aa11.11□□□□□ -0.63
SCAMP2-209ENST00000567638 NPBWR1P48145 328 aa11.11□□□□□ -0.63
SCAMP2-209ENST00000567638 TFPI2P48307 235 aa11.11□□□□□ -0.63
SCAMP2-209ENST00000567638 CMC4P56277 68 aaPredicted RBP11.11□□□□□ -0.63
SCAMP2-209ENST00000567638 TAS2R19P59542 299 aa11.11□□□□□ -0.63
SCAMP2-209ENST00000567638 ZNF124Q15973 351 aa11.11□□□□□ -0.63
SCAMP2-209ENST00000567638 TRIM16LQ309B1 348 aa11.11□□□□□ -0.63
SCAMP2-209ENST00000567638 GPR107Q5VW38 600 aa11.11□□□□□ -0.63
SCAMP2-209ENST00000567638 PVRIGQ6DKI7 326 aa11.11□□□□□ -0.63
SCAMP2-209ENST00000567638 TOMM20LQ6UXN7 152 aa11.11□□□□□ -0.63
SCAMP2-209ENST00000567638 TMEM229BQ8NBD8 167 aa11.11□□□□□ -0.63
SCAMP2-209ENST00000567638 TERB2Q8NHR7 220 aa11.11□□□□□ -0.63
SCAMP2-209ENST00000567638 ZFAND1Q8TCF1 268 aa11.11□□□□□ -0.63
SCAMP2-209ENST00000567638 PDCD10Q9BUL8 212 aa11.11□□□□□ -0.63
SCAMP2-209ENST00000567638 COPZ2Q9P299 210 aa11.11□□□□□ -0.63
SCAMP2-209ENST00000567638 HYDINQ4G0P3 5121 aa11.1□□□□□ -0.63
SCAMP2-209ENST00000567638 RAB3DO95716 219 aa11.1□□□□□ -0.63
SCAMP2-209ENST00000567638 CD5P06127 495 aa11.1□□□□□ -0.63
SCAMP2-209ENST00000567638 RNASE2P10153 161 aaKnown RBP11.1□□□□□ -0.63
SCAMP2-209ENST00000567638 ATF4P18848 351 aaPredicted RBP11.1□□□□□ -0.63
SCAMP2-209ENST00000567638 UCP1P25874 307 aa11.1□□□□□ -0.63
SCAMP2-209ENST00000567638 SP6Q3SY56 376 aa11.1□□□□□ -0.63
SCAMP2-209ENST00000567638 SCGB2B2Q4G0G5 96 aa11.1□□□□□ -0.63
SCAMP2-209ENST00000567638 ZNF600Q6ZNG1 722 aa11.1□□□□□ -0.63
SCAMP2-209ENST00000567638 OR13C8Q8NGS7 320 aa11.1□□□□□ -0.63
SCAMP2-209ENST00000567638 LINC00476Q8WZB0 136 aa11.1□□□□□ -0.63
SCAMP2-209ENST00000567638 ZFAND3Q9H8U3 227 aa11.1□□□□□ -0.63
SCAMP2-209ENST00000567638 PUS1Q9Y606 427 aaKnown RBP eCLIP11.1□□□□□ -0.63
SCAMP2-209ENST00000567638 A0A0G2JRQ6 117 aa11.09□□□□□ -0.63
SCAMP2-209ENST00000567638 GABARAPH6UMI1 98 aa11.09□□□□□ -0.63
SCAMP2-209ENST00000567638 B3GALNT1O75752 331 aa11.09□□□□□ -0.63
SCAMP2-209ENST00000567638 TMEM50AO95807 157 aa11.09□□□□□ -0.63
SCAMP2-209ENST00000567638 ETV6P41212 452 aa11.09□□□□□ -0.63
SCAMP2-209ENST00000567638 HOXA1P49639 335 aaPredicted RBP11.09□□□□□ -0.63
SCAMP2-209ENST00000567638 SUB1P53999 127 aaKnown RBP eCLIP11.09□□□□□ -0.63
SCAMP2-209ENST00000567638 PAFAH1B2P68402 229 aa11.09□□□□□ -0.63
SCAMP2-209ENST00000567638 STEAP1BQ6NZ63 245 aa11.09□□□□□ -0.63
SCAMP2-209ENST00000567638 TCF24Q7RTU0 167 aa11.09□□□□□ -0.63
SCAMP2-209ENST00000567638 GBGT1Q8N5D6 347 aa11.09□□□□□ -0.63
SCAMP2-209ENST00000567638 MARCH1Q8TCQ1 289 aa11.09□□□□□ -0.63
SCAMP2-209ENST00000567638 ST8SIA2Q92186 375 aa11.09□□□□□ -0.63
SCAMP2-209ENST00000567638 RRNAD1Q96FB5 475 aaKnown RBP11.09□□□□□ -0.63
SCAMP2-209ENST00000567638 MIXL1Q9H2W2 232 aa11.09□□□□□ -0.63
SCAMP2-209ENST00000567638 VSIRQ9H7M9 311 aa11.09□□□□□ -0.63
SCAMP2-209ENST00000567638 EPPK1P58107 5090 aaKnown RBP11.09□□□□□ -0.63
SCAMP2-209ENST00000567638 A0A1B0GU03 582 aa11.08□□□□□ -0.64
SCAMP2-209ENST00000567638 APOHP02749 345 aaPredicted RBP11.08□□□□□ -0.64
SCAMP2-209ENST00000567638 SSBP1Q04837 148 aaKnown RBP11.08□□□□□ -0.64
SCAMP2-209ENST00000567638 TMEM217Q8N7C4 229 aa11.08□□□□□ -0.64
SCAMP2-209ENST00000567638 RNASE11Q8TAA1 199 aaKnown RBP11.08□□□□□ -0.64
SCAMP2-209ENST00000567638 CSTL1Q9H114 145 aa11.08□□□□□ -0.64
SCAMP2-209ENST00000567638 ENY2Q9NPA8 101 aa11.08□□□□□ -0.64
SCAMP2-209ENST00000567638 MPTX1A8MV57 137 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms