RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 B3GALNT1O75752 331 aa14.99□□□□□ -0.01
CLN6-207ENST00000566347 IGKV1-5P01602 117 aa14.99□□□□□ -0.01
CLN6-207ENST00000566347 CD74P04233 296 aa14.99□□□□□ -0.01
CLN6-207ENST00000566347 CTSDP07339 412 aaPredicted RBP14.99□□□□□ -0.01
CLN6-207ENST00000566347 SNCAP37840 140 aa14.99□□□□□ -0.01
CLN6-207ENST00000566347 PPP5CP53041 499 aa14.99□□□□□ -0.01
CLN6-207ENST00000566347 ODF3L2Q3SX64 289 aa14.99□□□□□ -0.01
CLN6-207ENST00000566347 Q6ZWC4 215 aa14.99□□□□□ -0.01
CLN6-207ENST00000566347 SLC35G3Q8N808 338 aa14.99□□□□□ -0.01
CLN6-207ENST00000566347 TMEM116Q8NCL8 245 aa14.99□□□□□ -0.01
CLN6-207ENST00000566347 PDCD10Q9BUL8 212 aa14.99□□□□□ -0.01
CLN6-207ENST00000566347 RHPN1-AS1Q9BWJ2 59 aa14.99□□□□□ -0.01
CLN6-207ENST00000566347 DNAH1Q9P2D7 4330 aa14.99□□□□□ -0.01
CLN6-207ENST00000566347 KIR2DL5BA0A0G2JN68 375 aa14.98□□□□□ -0.01
CLN6-207ENST00000566347 KIR2DL5BA0A0G2JPC4 375 aa14.98□□□□□ -0.01
CLN6-207ENST00000566347 GABARAPH6UMI1 98 aa14.98□□□□□ -0.01
CLN6-207ENST00000566347 CHEK1O14757 476 aa14.98□□□□□ -0.01
CLN6-207ENST00000566347 RAB3DO95716 219 aa14.98□□□□□ -0.01
CLN6-207ENST00000566347 P0C879 139 aa14.98□□□□□ -0.01
CLN6-207ENST00000566347 MRPS10P82664 201 aaKnown RBP14.98□□□□□ -0.01
CLN6-207ENST00000566347 SSBP1Q04837 148 aaKnown RBP14.98□□□□□ -0.01
CLN6-207ENST00000566347 IZUMO4Q1ZYL8 232 aa14.98□□□□□ -0.01
CLN6-207ENST00000566347 TRIM16LQ309B1 348 aa14.98□□□□□ -0.01
CLN6-207ENST00000566347 GPR141Q7Z602 305 aa14.98□□□□□ -0.01
CLN6-207ENST00000566347 KIR2DL5AQ8N109 375 aa14.98□□□□□ -0.01
CLN6-207ENST00000566347 KIR2DL5BQ8NHK3 375 aa14.98□□□□□ -0.01
CLN6-207ENST00000566347 ZNF414Q96IQ9 312 aa14.98□□□□□ -0.01
CLN6-207ENST00000566347 RNF2Q99496 336 aa14.98□□□□□ -0.01
CLN6-207ENST00000566347 MRPS26Q9BYN8 205 aaKnown RBP14.98□□□□□ -0.01
CLN6-207ENST00000566347 TRAV14DV4A0A0A6YYC5 116 aa14.97□□□□□ -0.01
CLN6-207ENST00000566347 A0A0B4J293 547 aa14.97□□□□□ -0.01
CLN6-207ENST00000566347 RGS5O15539 181 aa14.97□□□□□ -0.01
CLN6-207ENST00000566347 ST8SIA3O43173 380 aa14.97□□□□□ -0.01
CLN6-207ENST00000566347 IFNA17P01571 189 aa14.97□□□□□ -0.01
CLN6-207ENST00000566347 IGHV3-48P01763 117 aa14.97□□□□□ -0.01
CLN6-207ENST00000566347 BMI1P35226 326 aa14.97□□□□□ -0.01
CLN6-207ENST00000566347 NPBWR1P48145 328 aa14.97□□□□□ -0.01
CLN6-207ENST00000566347 SUB1P53999 127 aaKnown RBP eCLIP14.97□□□□□ -0.01
CLN6-207ENST00000566347 CMC4P56277 68 aaPredicted RBP14.97□□□□□ -0.01
CLN6-207ENST00000566347 SCGB2B2Q4G0G5 96 aa14.97□□□□□ -0.01
CLN6-207ENST00000566347 SPINK9Q5DT21 86 aa14.97□□□□□ -0.01
CLN6-207ENST00000566347 STEAP1BQ6NZ63 245 aa14.97□□□□□ -0.01
CLN6-207ENST00000566347 WFDC3Q8IUB2 231 aa14.97□□□□□ -0.01
CLN6-207ENST00000566347 DUSP18Q8NEJ0 188 aa14.97□□□□□ -0.01
CLN6-207ENST00000566347 OR4D10Q8NGI6 311 aa14.97□□□□□ -0.01
CLN6-207ENST00000566347 OR13C8Q8NGS7 320 aa14.97□□□□□ -0.01
CLN6-207ENST00000566347 GALNT14Q96FL9 552 aa14.97□□□□□ -0.01
CLN6-207ENST00000566347 GINS3Q9BRX5 216 aa14.97□□□□□ -0.01
CLN6-207ENST00000566347 CORTO00230 105 aa14.96□□□□□ -0.01
CLN6-207ENST00000566347 SPRY2O43597 315 aa14.96□□□□□ -0.01
CLN6-207ENST00000566347 UCP1P25874 307 aa14.96□□□□□ -0.01
CLN6-207ENST00000566347 MEF2DQ14814 521 aa14.96□□□□□ -0.01
CLN6-207ENST00000566347 STPG3Q8N7X2 389 aa14.96□□□□□ -0.01
CLN6-207ENST00000566347 RRNAD1Q96FB5 475 aaKnown RBP14.96□□□□□ -0.01
CLN6-207ENST00000566347 C6orf62Q9GZU0 229 aaPredicted RBP14.96□□□□□ -0.01
CLN6-207ENST00000566347 CD5P06127 495 aa14.95□□□□□ -0.02
CLN6-207ENST00000566347 RNASE11Q8TAA1 199 aaKnown RBP14.95□□□□□ -0.02
CLN6-207ENST00000566347 MARCH1Q8TCQ1 289 aa14.95□□□□□ -0.02
CLN6-207ENST00000566347 MIXL1Q9H2W2 232 aa14.95□□□□□ -0.02
CLN6-207ENST00000566347 ENY2Q9NPA8 101 aa14.95□□□□□ -0.02
CLN6-207ENST00000566347 ALDH3B2P48448 385 aa14.94□□□□□ -0.02
CLN6-207ENST00000566347 HOXA1P49639 335 aaPredicted RBP14.94□□□□□ -0.02
CLN6-207ENST00000566347 DEFB135Q30KP9 77 aa14.94□□□□□ -0.02
CLN6-207ENST00000566347 SP6Q3SY56 376 aa14.94□□□□□ -0.02
CLN6-207ENST00000566347 PVRIGQ6DKI7 326 aa14.94□□□□□ -0.02
CLN6-207ENST00000566347 C14orf166Q9Y224 244 aaKnown RBP14.94□□□□□ -0.02
CLN6-207ENST00000566347 IGHV3-49A0A0A0MS15 119 aa14.93□□□□□ -0.02
CLN6-207ENST00000566347 PAFAH1B2P68402 229 aa14.93□□□□□ -0.02
CLN6-207ENST00000566347 TNFRSF9Q07011 255 aa14.93□□□□□ -0.02
CLN6-207ENST00000566347 TOMM20LQ6UXN7 152 aa14.93□□□□□ -0.02
CLN6-207ENST00000566347 ZNF600Q6ZNG1 722 aa14.93□□□□□ -0.02
CLN6-207ENST00000566347 FAM219AQ8IW50 185 aa14.93□□□□□ -0.02
CLN6-207ENST00000566347 SMIM4Q8WVI0 70 aa14.93□□□□□ -0.02
CLN6-207ENST00000566347 RNF183Q96D59 192 aa14.93□□□□□ -0.02
CLN6-207ENST00000566347 RABL2AQ9UBK7 228 aaPredicted RBP14.93□□□□□ -0.02
CLN6-207ENST00000566347 RABL2BQ9UNT1 228 aa14.93□□□□□ -0.02
CLN6-207ENST00000566347 DISC1C4P0D8 188 aa14.92□□□□□ -0.02
CLN6-207ENST00000566347 CTDSP2O14595 271 aa14.92□□□□□ -0.02
CLN6-207ENST00000566347 RNASE2P10153 161 aaKnown RBP14.92□□□□□ -0.02
CLN6-207ENST00000566347 RPL35AP18077 110 aaKnown RBP14.92□□□□□ -0.02
CLN6-207ENST00000566347 ETV6P41212 452 aa14.92□□□□□ -0.02
CLN6-207ENST00000566347 SPCS2Q15005 226 aa14.92□□□□□ -0.02
CLN6-207ENST00000566347 SURF2Q15527 256 aaPredicted RBP14.92□□□□□ -0.02
CLN6-207ENST00000566347 FAM90A2PQ658T7 463 aa14.92□□□□□ -0.02
CLN6-207ENST00000566347 LYG2Q86SG7 212 aa14.92□□□□□ -0.02
CLN6-207ENST00000566347 TMEM222Q9H0R3 208 aa14.92□□□□□ -0.02
CLN6-207ENST00000566347 MAP6D1Q9H9H5 199 aa14.92□□□□□ -0.02
CLN6-207ENST00000566347 A0A0J9YWU9 116 aa14.91□□□□□ -0.02
CLN6-207ENST00000566347 SCGB2A1O75556 95 aa14.91□□□□□ -0.02
CLN6-207ENST00000566347 CDS2O95674 445 aa14.91□□□□□ -0.02
CLN6-207ENST00000566347 TMEM50AO95807 157 aa14.91□□□□□ -0.02
CLN6-207ENST00000566347 TFPI2P48307 235 aa14.91□□□□□ -0.02
CLN6-207ENST00000566347 TCF24Q7RTU0 167 aa14.91□□□□□ -0.02
CLN6-207ENST00000566347 APRG1Q8IVJ8 170 aa14.91□□□□□ -0.02
CLN6-207ENST00000566347 VSIRQ9H7M9 311 aa14.91□□□□□ -0.02
CLN6-207ENST00000566347 PUS1Q9Y606 427 aaKnown RBP eCLIP14.91□□□□□ -0.02
CLN6-207ENST00000566347 IGKV3-7A0A075B6H7 116 aa14.9□□□□□ -0.02
CLN6-207ENST00000566347 IGHV3OR16-13A0A075B7E8 117 aa14.9□□□□□ -0.02
CLN6-207ENST00000566347 IGHV3-74A0A0B4J1X5 117 aa14.9□□□□□ -0.02
CLN6-207ENST00000566347 A0A0G2JRQ6 117 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms