RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 MDFIC2A0A1B0GVS7 189 aa15.09■□□□□ 0.01
CSPG4P13-201ENST00000565545 PRSS46E5RG02 174 aa15.09■□□□□ 0.01
CSPG4P13-201ENST00000565545 FNDC10F2Z333 226 aa15.09■□□□□ 0.01
CSPG4P13-201ENST00000565545 LY6EQ16553 131 aa15.09■□□□□ 0.01
CSPG4P13-201ENST00000565545 VWC2Q2TAL6 325 aa15.09■□□□□ 0.01
CSPG4P13-201ENST00000565545 TUSC1Q2TAM9 212 aa15.09■□□□□ 0.01
CSPG4P13-201ENST00000565545 PVRIGQ6DKI7 326 aa15.09■□□□□ 0.01
CSPG4P13-201ENST00000565545 TMEM219Q86XT9 240 aa15.09■□□□□ 0.01
CSPG4P13-201ENST00000565545 OR1P1Q8NH06 330 aa15.09■□□□□ 0.01
CSPG4P13-201ENST00000565545 ABHD5Q8WTS1 349 aa15.09■□□□□ 0.01
CSPG4P13-201ENST00000565545 TMEM68Q96MH6 324 aa15.09■□□□□ 0.01
CSPG4P13-201ENST00000565545 GINS3Q9BRX5 216 aa15.09■□□□□ 0.01
CSPG4P13-201ENST00000565545 SCGB1C1Q8TD33 95 aa15.08■□□□□ 0
CSPG4P13-201ENST00000565545 C22orf15Q8WYQ4 148 aa15.08■□□□□ 0
CSPG4P13-201ENST00000565545 P2RX4Q99571 388 aa15.08■□□□□ 0
CSPG4P13-201ENST00000565545 UQCC1Q9NVA1 299 aa15.08■□□□□ 0
CSPG4P13-201ENST00000565545 UBQLN2Q9UHD9 624 aa15.08■□□□□ 0
CSPG4P13-201ENST00000565545 NPIPB5A8MRT5 1133 aa15.07■□□□□ 0
CSPG4P13-201ENST00000565545 CORTO00230 105 aa15.07■□□□□ 0
CSPG4P13-201ENST00000565545 CFDP00746 253 aaPredicted RBP15.07■□□□□ 0
CSPG4P13-201ENST00000565545 IGHV4-59P01825 116 aa15.07■□□□□ 0
CSPG4P13-201ENST00000565545 CRYGCP07315 174 aa15.07■□□□□ 0
CSPG4P13-201ENST00000565545 AREGP15514 252 aa15.07■□□□□ 0
CSPG4P13-201ENST00000565545 GPX4P36969 197 aaPredicted RBP15.07■□□□□ 0
CSPG4P13-201ENST00000565545 EXOSC2Q13868 293 aaKnown RBP15.07■□□□□ 0
CSPG4P13-201ENST00000565545 SLC25A24Q6NUK1 477 aa15.07■□□□□ 0
CSPG4P13-201ENST00000565545 SGMS2Q8NHU3 365 aa15.07■□□□□ 0
CSPG4P13-201ENST00000565545 SCARB1Q8WTV0 552 aa15.07■□□□□ 0
CSPG4P13-201ENST00000565545 CACNG8Q8WXS5 425 aa15.07■□□□□ 0
CSPG4P13-201ENST00000565545 GNPNAT1Q96EK6 184 aaPredicted RBP15.07■□□□□ 0
CSPG4P13-201ENST00000565545 ZNF48Q96MX3 618 aaPredicted RBP15.07■□□□□ 0
CSPG4P13-201ENST00000565545 F11RQ9Y624 299 aaKnown RBP15.07■□□□□ 0
CSPG4P13-201ENST00000565545 SVEP1Q4LDE5 3571 aa15.06■□□□□ 0
CSPG4P13-201ENST00000565545 CYB5BO43169 146 aa15.06■□□□□ 0
CSPG4P13-201ENST00000565545 WIPF1O43516 503 aa15.06■□□□□ 0
CSPG4P13-201ENST00000565545 AMY1AP04745 511 aa15.06■□□□□ 0
CSPG4P13-201ENST00000565545 CTRB1P17538 263 aa15.06■□□□□ 0
CSPG4P13-201ENST00000565545 CTRB2Q6GPI1 263 aa15.06■□□□□ 0
CSPG4P13-201ENST00000565545 TTC9CQ8N5M4 171 aa15.06■□□□□ 0
CSPG4P13-201ENST00000565545 TMEM86BQ8N661 226 aa15.06■□□□□ 0
CSPG4P13-201ENST00000565545 VPREB3Q9UKI3 123 aa15.06■□□□□ 0
CSPG4P13-201ENST00000565545 SEC11BP0C7V7 166 aa15.05■□□□□ -0
CSPG4P13-201ENST00000565545 NDPQ00604 133 aa15.05■□□□□ -0
CSPG4P13-201ENST00000565545 CD69Q07108 199 aa15.05■□□□□ -0
CSPG4P13-201ENST00000565545 ETFRF1Q6IPR1 90 aa15.05■□□□□ -0
CSPG4P13-201ENST00000565545 HSPB9Q9BQS6 159 aa15.05■□□□□ -0
CSPG4P13-201ENST00000565545 WDR61Q9GZS3 305 aaKnown RBP15.05■□□□□ -0
CSPG4P13-201ENST00000565545 MPDU1O75352 247 aa15.04■□□□□ -0
CSPG4P13-201ENST00000565545 REG1AP05451 166 aa15.04■□□□□ -0
CSPG4P13-201ENST00000565545 EGR2P11161 476 aaPredicted RBP15.04■□□□□ -0
CSPG4P13-201ENST00000565545 CRIP2P52943 208 aaPredicted RBP15.04■□□□□ -0
CSPG4P13-201ENST00000565545 C3orf56Q8N813 242 aa15.04■□□□□ -0
CSPG4P13-201ENST00000565545 FAM103A1Q9BTL3 118 aaKnown RBP15.04■□□□□ -0
CSPG4P13-201ENST00000565545 WNT10AQ9GZT5 417 aa15.04■□□□□ -0
CSPG4P13-201ENST00000565545 NPVFQ9HCQ7 196 aa15.04■□□□□ -0
CSPG4P13-201ENST00000565545 UBE2L5PA0A1B0GUS4 154 aa15.03■□□□□ -0
CSPG4P13-201ENST00000565545 RPS10-NUDT3A0A1W2PQS6 291 aa15.03■□□□□ -0
CSPG4P13-201ENST00000565545 FBXO24O75426 580 aa15.03■□□□□ -0
CSPG4P13-201ENST00000565545 IGHG2P01859 326 aa15.03■□□□□ -0
CSPG4P13-201ENST00000565545 SPP1P10451 314 aa15.03■□□□□ -0
CSPG4P13-201ENST00000565545 DEFA4P12838 97 aa15.03■□□□□ -0
CSPG4P13-201ENST00000565545 MDKP21741 143 aaPredicted RBP15.03■□□□□ -0
CSPG4P13-201ENST00000565545 ATP6V0CP27449 155 aa15.03■□□□□ -0
CSPG4P13-201ENST00000565545 AKIRIN2Q53H80 203 aa15.03■□□□□ -0
CSPG4P13-201ENST00000565545 ASPHD1Q5U4P2 390 aa15.03■□□□□ -0
CSPG4P13-201ENST00000565545 ALKAL2Q6UX46 152 aa15.03■□□□□ -0
CSPG4P13-201ENST00000565545 RBMS3Q6XE24 437 aaKnown RBP15.03■□□□□ -0
CSPG4P13-201ENST00000565545 HSD17B11Q8NBQ5 300 aa15.03■□□□□ -0
CSPG4P13-201ENST00000565545 LRRC20Q8TCA0 184 aa15.03■□□□□ -0
CSPG4P13-201ENST00000565545 TAF15Q92804 592 aaKnown RBP eCLIP15.03■□□□□ -0
CSPG4P13-201ENST00000565545 PSMG3Q9BT73 122 aaPredicted RBP15.03■□□□□ -0
CSPG4P13-201ENST00000565545 PARP11Q9NR21 331 aa15.03■□□□□ -0
CSPG4P13-201ENST00000565545 WDR83OSQ9Y284 106 aa15.03■□□□□ -0
CSPG4P13-201ENST00000565545 TIMM9Q9Y5J7 89 aa15.03■□□□□ -0
CSPG4P13-201ENST00000565545 ATP6V0E1O15342 81 aa15.02■□□□□ -0
CSPG4P13-201ENST00000565545 HOXA3O43365 443 aaPredicted RBP15.02■□□□□ -0
CSPG4P13-201ENST00000565545 APELAP0DMC3 54 aa15.02■□□□□ -0
CSPG4P13-201ENST00000565545 SIGLECL1Q8N7X8 197 aa15.02■□□□□ -0
CSPG4P13-201ENST00000565545 LFNGQ8NES3 379 aa15.02■□□□□ -0
CSPG4P13-201ENST00000565545 FAM110DQ8TAY7 271 aaPredicted RBP15.02■□□□□ -0
CSPG4P13-201ENST00000565545 ZNF418Q8TF45 676 aaPredicted RBP15.02■□□□□ -0
CSPG4P13-201ENST00000565545 TMED6Q8WW62 240 aa15.02■□□□□ -0
CSPG4P13-201ENST00000565545 SLC35E1Q96K37 410 aa15.02■□□□□ -0
CSPG4P13-201ENST00000565545 SLC25A32Q9H2D1 315 aa15.02■□□□□ -0
CSPG4P13-201ENST00000565545 ZNF580Q9UK33 172 aa15.02■□□□□ -0
CSPG4P13-201ENST00000565545 FBXO7Q9Y3I1 522 aa15.02■□□□□ -0
CSPG4P13-201ENST00000565545 SMCO3A2RU48 225 aa15.01□□□□□ -0.01
CSPG4P13-201ENST00000565545 SOX15O60248 233 aa15.01□□□□□ -0.01
CSPG4P13-201ENST00000565545 IGF1P05019 195 aa15.01□□□□□ -0.01
CSPG4P13-201ENST00000565545 HIST1H1BP16401 226 aaKnown RBP15.01□□□□□ -0.01
CSPG4P13-201ENST00000565545 FGF7P21781 194 aa15.01□□□□□ -0.01
CSPG4P13-201ENST00000565545 OPRK1P41145 380 aa15.01□□□□□ -0.01
CSPG4P13-201ENST00000565545 MFAP2P55001 183 aa15.01□□□□□ -0.01
CSPG4P13-201ENST00000565545 RAB14P61106 215 aa15.01□□□□□ -0.01
CSPG4P13-201ENST00000565545 KLK9Q2XQG4 91 aa15.01□□□□□ -0.01
CSPG4P13-201ENST00000565545 ARSJQ5FYB0 599 aaPredicted RBP15.01□□□□□ -0.01
CSPG4P13-201ENST00000565545 UNQ5815/PRO19632Q6UWF5 114 aa15.01□□□□□ -0.01
CSPG4P13-201ENST00000565545 SLC16A13Q7RTY0 426 aa15.01□□□□□ -0.01
CSPG4P13-201ENST00000565545 TMEM144Q7Z5S9 345 aa15.01□□□□□ -0.01
CSPG4P13-201ENST00000565545 SLC35E3Q7Z769 313 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms