RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 SHPKQ9UHJ6 478 aa11.72□□□□□ -0.53
COMMD4-212ENST00000565517 F8W735 103 aaPredicted RBP11.71□□□□□ -0.53
COMMD4-212ENST00000565517 I3L2K1 104 aa11.71□□□□□ -0.53
COMMD4-212ENST00000565517 SPINK9Q5DT21 86 aa11.71□□□□□ -0.53
COMMD4-212ENST00000565517 LCN12Q6JVE5 192 aa11.71□□□□□ -0.53
COMMD4-212ENST00000565517 ADAMTSL5Q6ZMM2 481 aa11.71□□□□□ -0.53
COMMD4-212ENST00000565517 TMED4Q7Z7H5 227 aa11.71□□□□□ -0.53
COMMD4-212ENST00000565517 HAPLN4Q86UW8 402 aa11.71□□□□□ -0.53
COMMD4-212ENST00000565517 MISP3Q96FF7 219 aa11.71□□□□□ -0.53
COMMD4-212ENST00000565517 C7orf50Q9BRJ6 194 aaKnown RBP11.71□□□□□ -0.53
COMMD4-212ENST00000565517 PALMDQ9NP74 551 aa11.71□□□□□ -0.53
COMMD4-212ENST00000565517 CACNG5Q9UF02 275 aa11.71□□□□□ -0.53
COMMD4-212ENST00000565517 SMAD5-AS1Q9Y6J3 95 aa11.71□□□□□ -0.53
COMMD4-212ENST00000565517 DUXBA0A1W2PPF3 345 aa11.7□□□□□ -0.54
COMMD4-212ENST00000565517 ZNF320A2RRD8 509 aa11.7□□□□□ -0.54
COMMD4-212ENST00000565517 OR2T8A6NH00 312 aa11.7□□□□□ -0.54
COMMD4-212ENST00000565517 A6NHS1 94 aa11.7□□□□□ -0.54
COMMD4-212ENST00000565517 CENPXA8MT69 81 aa11.7□□□□□ -0.54
COMMD4-212ENST00000565517 CORTO00230 105 aa11.7□□□□□ -0.54
COMMD4-212ENST00000565517 SULT1A3P0DMM9 295 aa11.7□□□□□ -0.54
COMMD4-212ENST00000565517 SULT1A4P0DMN0 295 aa11.7□□□□□ -0.54
COMMD4-212ENST00000565517 FOLR2P14207 255 aa11.7□□□□□ -0.54
COMMD4-212ENST00000565517 CBLN1P23435 193 aa11.7□□□□□ -0.54
COMMD4-212ENST00000565517 HOXA1P49639 335 aaPredicted RBP11.7□□□□□ -0.54
COMMD4-212ENST00000565517 MFAP4P55083 255 aa11.7□□□□□ -0.54
COMMD4-212ENST00000565517 ELLP55199 621 aaPredicted RBP11.7□□□□□ -0.54
COMMD4-212ENST00000565517 NMSQ5H8A3 153 aa11.7□□□□□ -0.54
COMMD4-212ENST00000565517 CENPSQ8N2Z9 138 aa11.7□□□□□ -0.54
COMMD4-212ENST00000565517 LRTM2Q8N967 370 aa11.7□□□□□ -0.54
COMMD4-212ENST00000565517 TECRQ9NZ01 308 aaKnown RBP11.7□□□□□ -0.54
COMMD4-212ENST00000565517 IGHV3-21A0A0B4J1V1 117 aa11.69□□□□□ -0.54
COMMD4-212ENST00000565517 TMEM213A2RRL7 107 aa11.69□□□□□ -0.54
COMMD4-212ENST00000565517 MT-CO2P00403 227 aa11.69□□□□□ -0.54
COMMD4-212ENST00000565517 RNASE2P10153 161 aaKnown RBP11.69□□□□□ -0.54
COMMD4-212ENST00000565517 IL7P13232 177 aa11.69□□□□□ -0.54
COMMD4-212ENST00000565517 CCR6P51684 374 aa11.69□□□□□ -0.54
COMMD4-212ENST00000565517 UBE2MP61081 183 aaKnown RBP11.69□□□□□ -0.54
COMMD4-212ENST00000565517 CD69Q07108 199 aa11.69□□□□□ -0.54
COMMD4-212ENST00000565517 DEFB114Q30KQ6 69 aa11.69□□□□□ -0.54
COMMD4-212ENST00000565517 BSXQ3C1V8 233 aa11.69□□□□□ -0.54
COMMD4-212ENST00000565517 Q56UQ5 140 aa11.69□□□□□ -0.54
COMMD4-212ENST00000565517 LYZL2Q7Z4W2 148 aa11.69□□□□□ -0.54
COMMD4-212ENST00000565517 MARC2Q969Z3 335 aa11.69□□□□□ -0.54
COMMD4-212ENST00000565517 ZC4H2Q9NQZ6 224 aa11.69□□□□□ -0.54
COMMD4-212ENST00000565517 PRR13Q9NZ81 148 aa11.69□□□□□ -0.54
COMMD4-212ENST00000565517 UFC1Q9Y3C8 167 aa11.69□□□□□ -0.54
COMMD4-212ENST00000565517 A0A1B0GU03 582 aa11.68□□□□□ -0.54
COMMD4-212ENST00000565517 NDUFA4O00483 81 aa11.68□□□□□ -0.54
COMMD4-212ENST00000565517 NDUFB6O95139 128 aa11.68□□□□□ -0.54
COMMD4-212ENST00000565517 CTSGP08311 255 aa11.68□□□□□ -0.54
COMMD4-212ENST00000565517 C8orf88P0DMB2 117 aa11.68□□□□□ -0.54
COMMD4-212ENST00000565517 ADMP35318 185 aa11.68□□□□□ -0.54
COMMD4-212ENST00000565517 HTR2BP41595 481 aa11.68□□□□□ -0.54
COMMD4-212ENST00000565517 SMCO1Q147U7 214 aa11.68□□□□□ -0.54
COMMD4-212ENST00000565517 UNQ9165/PRO28630Q6UXU0 137 aa11.68□□□□□ -0.54
COMMD4-212ENST00000565517 UBAC2Q8NBM4 344 aa11.68□□□□□ -0.54
COMMD4-212ENST00000565517 DYNLRB2Q8TF09 96 aa11.68□□□□□ -0.54
COMMD4-212ENST00000565517 CHRDL1Q9BU40 450 aa11.68□□□□□ -0.54
COMMD4-212ENST00000565517 MRPL27Q9P0M9 148 aaKnown RBP11.68□□□□□ -0.54
COMMD4-212ENST00000565517 IGHV3-35A0A0C4DH35 117 aa11.67□□□□□ -0.54
COMMD4-212ENST00000565517 NUPL2O15504 423 aaKnown RBP11.67□□□□□ -0.54
COMMD4-212ENST00000565517 SFT2D2O95562 160 aa11.67□□□□□ -0.54
COMMD4-212ENST00000565517 VAMP1P23763 118 aa11.67□□□□□ -0.54
COMMD4-212ENST00000565517 NPBWR1P48145 328 aa11.67□□□□□ -0.54
COMMD4-212ENST00000565517 RELQ04864 619 aaPredicted RBP11.67□□□□□ -0.54
COMMD4-212ENST00000565517 CNPY1Q3B7I2 92 aa11.67□□□□□ -0.54
COMMD4-212ENST00000565517 CD300EQ496F6 205 aaPredicted RBP11.67□□□□□ -0.54
COMMD4-212ENST00000565517 TM4SF20Q53R12 229 aa11.67□□□□□ -0.54
COMMD4-212ENST00000565517 Q8N1Y9 231 aa11.67□□□□□ -0.54
COMMD4-212ENST00000565517 DUSP18Q8NEJ0 188 aa11.67□□□□□ -0.54
COMMD4-212ENST00000565517 TMEM190Q8WZ59 177 aa11.67□□□□□ -0.54
COMMD4-212ENST00000565517 PINX1Q96BK5 328 aaKnown RBP11.67□□□□□ -0.54
COMMD4-212ENST00000565517 HEYLQ9NQ87 328 aaPredicted RBP11.67□□□□□ -0.54
COMMD4-212ENST00000565517 HSPB7Q9UBY9 170 aa11.67□□□□□ -0.54
COMMD4-212ENST00000565517 COL7A1Q02388 2944 aa11.66□□□□□ -0.54
COMMD4-212ENST00000565517 IZUMO1RA6ND01 250 aa11.66□□□□□ -0.54
COMMD4-212ENST00000565517 CEBPZOSA8MTT3 80 aa11.66□□□□□ -0.54
COMMD4-212ENST00000565517 K7EMT4 169 aa11.66□□□□□ -0.54
COMMD4-212ENST00000565517 NHLRC4P0CG21 123 aaPredicted RBP11.66□□□□□ -0.54
COMMD4-212ENST00000565517 SLC25A6P12236 298 aa11.66□□□□□ -0.54
COMMD4-212ENST00000565517 EDN2P20800 178 aa11.66□□□□□ -0.54
COMMD4-212ENST00000565517 PPP1R1AQ13522 171 aa11.66□□□□□ -0.54
COMMD4-212ENST00000565517 ANKRD55Q3KP44 614 aa11.66□□□□□ -0.54
COMMD4-212ENST00000565517 C2orf83Q53S99 150 aa11.66□□□□□ -0.54
COMMD4-212ENST00000565517 UXS1Q8NBZ7 420 aa11.66□□□□□ -0.54
COMMD4-212ENST00000565517 CCDC32Q9BV29 185 aa11.66□□□□□ -0.54
COMMD4-212ENST00000565517 HIPK2Q9H2X6 1198 aa11.66□□□□□ -0.54
COMMD4-212ENST00000565517 TMED3Q9Y3Q3 217 aa11.66□□□□□ -0.54
COMMD4-212ENST00000565517 LINC00854A0A1B0GVQ3 168 aa11.65□□□□□ -0.54
COMMD4-212ENST00000565517 C15orf62A8K5M9 175 aa11.65□□□□□ -0.54
COMMD4-212ENST00000565517 ZNF785A8K8V0 405 aa11.65□□□□□ -0.54
COMMD4-212ENST00000565517 A8MZ25 164 aa11.65□□□□□ -0.54
COMMD4-212ENST00000565517 GNG7O60262 68 aa11.65□□□□□ -0.54
COMMD4-212ENST00000565517 BTCP35070 178 aa11.65□□□□□ -0.54
COMMD4-212ENST00000565517 TNFRSF9Q07011 255 aa11.65□□□□□ -0.54
COMMD4-212ENST00000565517 GTSCR1Q86UQ5 136 aa11.65□□□□□ -0.54
COMMD4-212ENST00000565517 NOXA1Q86UR1 476 aa11.65□□□□□ -0.54
COMMD4-212ENST00000565517 S100ZQ8WXG8 99 aa11.65□□□□□ -0.54
COMMD4-212ENST00000565517 CACNG8Q8WXS5 425 aa11.65□□□□□ -0.54
COMMD4-212ENST00000565517 DAZ1Q9NQZ3 744 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms