RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 PPP5CP53041 499 aa17.53■□□□□ 0.4
RAB40C-209ENST00000565511 Q6ZWC4 215 aa17.53■□□□□ 0.4
RAB40C-209ENST00000565511 LYG2Q86SG7 212 aa17.53■□□□□ 0.4
RAB40C-209ENST00000565511 ABHD1Q96SE0 405 aa17.53■□□□□ 0.4
RAB40C-209ENST00000565511 TP53TG1Q9Y2A0 90 aa17.53■□□□□ 0.4
RAB40C-209ENST00000565511 IGKV3-7A0A075B6H7 116 aa17.52■□□□□ 0.4
RAB40C-209ENST00000565511 A0A0G2JRQ6 117 aa17.52■□□□□ 0.4
RAB40C-209ENST00000565511 NUPL2O15504 423 aaKnown RBP17.52■□□□□ 0.4
RAB40C-209ENST00000565511 YIF1AO95070 293 aa17.52■□□□□ 0.4
RAB40C-209ENST00000565511 TFPI2P48307 235 aa17.52■□□□□ 0.4
RAB40C-209ENST00000565511 APOC4P55056 127 aa17.52■□□□□ 0.4
RAB40C-209ENST00000565511 PIGPP57054 158 aa17.52■□□□□ 0.4
RAB40C-209ENST00000565511 FAM90A2PQ658T7 463 aa17.52■□□□□ 0.4
RAB40C-209ENST00000565511 TMEM116Q8NCL8 245 aa17.52■□□□□ 0.4
RAB40C-209ENST00000565511 EXTL2Q9UBQ6 330 aa17.52■□□□□ 0.4
RAB40C-209ENST00000565511 APOHP02749 345 aaPredicted RBP17.51■□□□□ 0.39
RAB40C-209ENST00000565511 RELQ04864 619 aaPredicted RBP17.51■□□□□ 0.39
RAB40C-209ENST00000565511 RNASE10Q5GAN6 216 aaKnown RBP17.51■□□□□ 0.39
RAB40C-209ENST00000565511 LILRB2Q8N423 598 aa17.51■□□□□ 0.39
RAB40C-209ENST00000565511 RNF183Q96D59 192 aa17.51■□□□□ 0.39
RAB40C-209ENST00000565511 MIXL1Q9H2W2 232 aa17.51■□□□□ 0.39
RAB40C-209ENST00000565511 MRPL36Q9P0J6 103 aaKnown RBP17.51■□□□□ 0.39
RAB40C-209ENST00000565511 MTFP1Q9UDX5 166 aa17.51■□□□□ 0.39
RAB40C-209ENST00000565511 ST8SIA3O43173 380 aa17.5■□□□□ 0.39
RAB40C-209ENST00000565511 TNFRSF9Q07011 255 aa17.5■□□□□ 0.39
RAB40C-209ENST00000565511 SP6Q3SY56 376 aa17.5■□□□□ 0.39
RAB40C-209ENST00000565511 TXN2Q99757 166 aa17.5■□□□□ 0.39
RAB40C-209ENST00000565511 MAP6D1Q9H9H5 199 aa17.5■□□□□ 0.39
RAB40C-209ENST00000565511 KMT2AQ03164 3969 aa17.49■□□□□ 0.39
RAB40C-209ENST00000565511 KIR2DL5BA0A0G2JN68 375 aa17.49■□□□□ 0.39
RAB40C-209ENST00000565511 KIR2DL5BA0A0G2JPC4 375 aa17.49■□□□□ 0.39
RAB40C-209ENST00000565511 BMI1P35226 326 aa17.49■□□□□ 0.39
RAB40C-209ENST00000565511 PVRIGQ6DKI7 326 aa17.49■□□□□ 0.39
RAB40C-209ENST00000565511 MZT2AQ6P582 158 aa17.49■□□□□ 0.39
RAB40C-209ENST00000565511 TOMM20LQ6UXN7 152 aa17.49■□□□□ 0.39
RAB40C-209ENST00000565511 KIR2DL5AQ8N109 375 aa17.49■□□□□ 0.39
RAB40C-209ENST00000565511 GBGT1Q8N5D6 347 aa17.49■□□□□ 0.39
RAB40C-209ENST00000565511 KIR2DL5BQ8NHK3 375 aa17.49■□□□□ 0.39
RAB40C-209ENST00000565511 LINC00476Q8WZB0 136 aa17.49■□□□□ 0.39
RAB40C-209ENST00000565511 ST8SIA2Q92186 375 aa17.49■□□□□ 0.39
RAB40C-209ENST00000565511 ZNF486Q96H40 463 aaPredicted RBP17.49■□□□□ 0.39
RAB40C-209ENST00000565511 ZFAND3Q9H8U3 227 aa17.49■□□□□ 0.39
RAB40C-209ENST00000565511 CXorf65A6NEN9 183 aa17.48■□□□□ 0.39
RAB40C-209ENST00000565511 UBE2CO00762 179 aa17.48■□□□□ 0.39
RAB40C-209ENST00000565511 GNG7O60262 68 aa17.48■□□□□ 0.39
RAB40C-209ENST00000565511 RNASE2P10153 161 aaKnown RBP17.48■□□□□ 0.39
RAB40C-209ENST00000565511 ZNF182P17025 639 aaPredicted RBP17.48■□□□□ 0.39
RAB40C-209ENST00000565511 GPR107Q5VW38 600 aa17.48■□□□□ 0.39
RAB40C-209ENST00000565511 FAAP20Q6NZ36 180 aa17.48■□□□□ 0.39
RAB40C-209ENST00000565511 ARRDC1Q8N5I2 433 aa17.48■□□□□ 0.39
RAB40C-209ENST00000565511 STPG3Q8N7X2 389 aa17.48■□□□□ 0.39
RAB40C-209ENST00000565511 OR13C8Q8NGS7 320 aa17.48■□□□□ 0.39
RAB40C-209ENST00000565511 GALNT14Q96FL9 552 aa17.48■□□□□ 0.39
RAB40C-209ENST00000565511 IGHV3-66A0A0C4DH42 116 aa17.47■□□□□ 0.39
RAB40C-209ENST00000565511 C3orf85A0A1B0GTC6 90 aa17.47■□□□□ 0.39
RAB40C-209ENST00000565511 A0A1B0GU03 582 aa17.47■□□□□ 0.39
RAB40C-209ENST00000565511 CD74P04233 296 aa17.47■□□□□ 0.39
RAB40C-209ENST00000565511 AKR1C2P52895 323 aa17.47■□□□□ 0.39
RAB40C-209ENST00000565511 ERHP84090 104 aaKnown RBP17.47■□□□□ 0.39
RAB40C-209ENST00000565511 SLC35G3Q8N808 338 aa17.47■□□□□ 0.39
RAB40C-209ENST00000565511 FNDC4Q9H6D8 234 aaPredicted RBP17.47■□□□□ 0.39
RAB40C-209ENST00000565511 TRAV14DV4A0A0A6YYC5 116 aa17.46■□□□□ 0.39
RAB40C-209ENST00000565511 ETV6P41212 452 aa17.46■□□□□ 0.39
RAB40C-209ENST00000565511 MLANAQ16655 118 aa17.46■□□□□ 0.39
RAB40C-209ENST00000565511 Q6ZRM9 215 aa17.46■□□□□ 0.39
RAB40C-209ENST00000565511 TCF24Q7RTU0 167 aa17.46■□□□□ 0.39
RAB40C-209ENST00000565511 FAM24BQ8N5W8 94 aa17.46■□□□□ 0.39
RAB40C-209ENST00000565511 MARCH1Q8TCQ1 289 aa17.46■□□□□ 0.39
RAB40C-209ENST00000565511 PUS1Q9Y606 427 aaKnown RBP eCLIP17.46■□□□□ 0.39
RAB40C-209ENST00000565511 INS-IGF2F8WCM5 200 aa17.45■□□□□ 0.38
RAB40C-209ENST00000565511 UCP1P25874 307 aa17.45■□□□□ 0.38
RAB40C-209ENST00000565511 TMEM229BQ8NBD8 167 aa17.45■□□□□ 0.38
RAB40C-209ENST00000565511 LHFPL5Q8TAF8 219 aa17.45■□□□□ 0.38
RAB40C-209ENST00000565511 AP3S1Q92572 193 aa17.45■□□□□ 0.38
RAB40C-209ENST00000565511 VSIRQ9H7M9 311 aa17.45■□□□□ 0.38
RAB40C-209ENST00000565511 AGRNO00468 2067 aa17.44■□□□□ 0.38
RAB40C-209ENST00000565511 TBPP20226 339 aa17.44■□□□□ 0.38
RAB40C-209ENST00000565511 TRIM16LQ309B1 348 aa17.44■□□□□ 0.38
RAB40C-209ENST00000565511 SCGB2B2Q4G0G5 96 aa17.44■□□□□ 0.38
RAB40C-209ENST00000565511 FRAS1Q86XX4 4008 aa17.44■□□□□ 0.38
RAB40C-209ENST00000565511 RAB3DO95716 219 aa17.43■□□□□ 0.38
RAB40C-209ENST00000565511 TMEM50AO95807 157 aa17.43■□□□□ 0.38
RAB40C-209ENST00000565511 IFNA17P01571 189 aa17.43■□□□□ 0.38
RAB40C-209ENST00000565511 HOXA1P49639 335 aaPredicted RBP17.43■□□□□ 0.38
RAB40C-209ENST00000565511 SPCS2Q15005 226 aa17.43■□□□□ 0.38
RAB40C-209ENST00000565511 DUSP18Q8NEJ0 188 aa17.43■□□□□ 0.38
RAB40C-209ENST00000565511 TERB2Q8NHR7 220 aa17.43■□□□□ 0.38
RAB40C-209ENST00000565511 COPZ2Q9P299 210 aa17.43■□□□□ 0.38
RAB40C-209ENST00000565511 CTDSP2O14595 271 aa17.42■□□□□ 0.38
RAB40C-209ENST00000565511 DFFBO76075 338 aa17.42■□□□□ 0.38
RAB40C-209ENST00000565511 BSXQ3C1V8 233 aa17.42■□□□□ 0.38
RAB40C-209ENST00000565511 STEAP1BQ6NZ63 245 aa17.42■□□□□ 0.38
RAB40C-209ENST00000565511 CEMP1Q6PRD7 247 aaPredicted RBP17.42■□□□□ 0.38
RAB40C-209ENST00000565511 ZNF600Q6ZNG1 722 aa17.42■□□□□ 0.38
RAB40C-209ENST00000565511 RTBDNQ9BSG5 229 aaPredicted RBP17.42■□□□□ 0.38
RAB40C-209ENST00000565511 MS4A6AQ9H2W1 248 aa17.42■□□□□ 0.38
RAB40C-209ENST00000565511 NUPR2A6NF83 97 aa17.41■□□□□ 0.38
RAB40C-209ENST00000565511 OR5AC1P0C628 307 aa17.41■□□□□ 0.38
RAB40C-209ENST00000565511 SNCAP37840 140 aa17.41■□□□□ 0.38
RAB40C-209ENST00000565511 NPBWR1P48145 328 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms