RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 RNASE11Q8TAA1 199 aaKnown RBP4.77□□□□□ -1.65
TCF4-228ENST00000565393 RRNAD1Q96FB5 475 aaKnown RBP4.77□□□□□ -1.65
TCF4-228ENST00000565393 ZNF486Q96H40 463 aaPredicted RBP4.77□□□□□ -1.65
TCF4-228ENST00000565393 FAM210AQ96ND0 272 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 TP53RKQ96S44 253 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 ABHD1Q96SE0 405 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 RNF2Q99496 336 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 NXF2Q9GZY0 626 aaKnown RBP4.77□□□□□ -1.65
TCF4-228ENST00000565393 NAA50Q9GZZ1 169 aaKnown RBP4.77□□□□□ -1.65
TCF4-228ENST00000565393 FAM212BQ9NTI7 297 aaPredicted RBP4.77□□□□□ -1.65
TCF4-228ENST00000565393 COPZ2Q9P299 210 aa4.77□□□□□ -1.65
TCF4-228ENST00000565393 PRKDCP78527 4128 aaKnown RBP4.77□□□□□ -1.65
TCF4-228ENST00000565393 A0A0B4J293 547 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 IGHV3-66A0A0C4DH42 116 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 KIR2DL5BA0A0G2JN68 375 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 KIR2DL5BA0A0G2JPC4 375 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 TEX13DA0A0J9YY54 714 aaPredicted RBP4.76□□□□□ -1.65
TCF4-228ENST00000565393 ST8SIA3O43173 380 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 TMEM50AO95807 157 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 LY6G6CO95867 125 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 NPPCP23582 126 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 HOXA1P49639 335 aaPredicted RBP4.76□□□□□ -1.65
TCF4-228ENST00000565393 RND3P61587 244 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 MLANAQ16655 118 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 DEFB135Q30KP9 77 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 STEAP1BQ6NZ63 245 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 TOMM20LQ6UXN7 152 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 TCF24Q7RTU0 167 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 LYG2Q86SG7 212 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 KIR2DL5AQ8N109 375 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 ARRDC1Q8N5I2 433 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 CCDC71LQ8N9Z2 235 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 TMEM229BQ8NBD8 167 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 KIR2DL5BQ8NHK3 375 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 MARCH1Q8TCQ1 289 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 TMEM230Q96A57 120 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 GALNT14Q96FL9 552 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 GINS3Q9BRX5 216 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 CSTL1Q9H114 145 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 MAP6D1Q9H9H5 199 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 MTFP1Q9UDX5 166 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 TP53TG1Q9Y2A0 90 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 CMYA5Q8N3K9 4069 aa4.76□□□□□ -1.65
TCF4-228ENST00000565393 MPTX1A8MV57 137 aa4.75□□□□□ -1.65
TCF4-228ENST00000565393 DISC1C4P0D8 188 aa4.75□□□□□ -1.65
TCF4-228ENST00000565393 CTDSP2O14595 271 aa4.75□□□□□ -1.65
TCF4-228ENST00000565393 DFFBO76075 338 aa4.75□□□□□ -1.65
TCF4-228ENST00000565393 IGKV1-5P01602 117 aa4.75□□□□□ -1.65
TCF4-228ENST00000565393 APOHP02749 345 aaPredicted RBP4.75□□□□□ -1.65
TCF4-228ENST00000565393 CD5P06127 495 aa4.75□□□□□ -1.65
TCF4-228ENST00000565393 TBPP20226 339 aa4.75□□□□□ -1.65
TCF4-228ENST00000565393 FCGR2BP31994 310 aaPredicted RBP4.75□□□□□ -1.65
TCF4-228ENST00000565393 OPRK1P41145 380 aa4.75□□□□□ -1.65
TCF4-228ENST00000565393 PPP5CP53041 499 aa4.75□□□□□ -1.65
TCF4-228ENST00000565393 TAS2R19P59542 299 aa4.75□□□□□ -1.65
TCF4-228ENST00000565393 ZNF124Q15973 351 aa4.75□□□□□ -1.65
TCF4-228ENST00000565393 CTF1Q16619 201 aa4.75□□□□□ -1.65
TCF4-228ENST00000565393 ODF3L2Q3SX64 289 aa4.75□□□□□ -1.65
TCF4-228ENST00000565393 GPR141Q7Z602 305 aa4.75□□□□□ -1.65
TCF4-228ENST00000565393 TMEM217Q8N7C4 229 aa4.75□□□□□ -1.65
TCF4-228ENST00000565393 OR4D10Q8NGI6 311 aa4.75□□□□□ -1.65
TCF4-228ENST00000565393 OR13C8Q8NGS7 320 aa4.75□□□□□ -1.65
TCF4-228ENST00000565393 RNF183Q96D59 192 aa4.75□□□□□ -1.65
TCF4-228ENST00000565393 OR10C1Q96KK4 312 aa4.75□□□□□ -1.65
TCF4-228ENST00000565393 RARRES2Q99969 163 aa4.75□□□□□ -1.65
TCF4-228ENST00000565393 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.75□□□□□ -1.65
TCF4-228ENST00000565393 C14orf166Q9Y224 244 aaKnown RBP4.75□□□□□ -1.65
TCF4-228ENST00000565393 KCNIP3Q9Y2W7 256 aa4.75□□□□□ -1.65
TCF4-228ENST00000565393 PUS1Q9Y606 427 aaKnown RBP eCLIP4.75□□□□□ -1.65
TCF4-228ENST00000565393 A0A1W2PS18 150 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 CEBPZOSA8MTT3 80 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 GABARAPH6UMI1 98 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 CORTO00230 105 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 SCGB2A1O75556 95 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 B3GALNT1O75752 331 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 GABARAPO95166 117 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 OR5AC1P0C628 307 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 DEFB131AP59861 70 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 DHODHQ02127 395 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 TNFRSF9Q07011 255 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 IL18Q14116 193 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 MEF2DQ14814 521 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 FAM90A2PQ658T7 463 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 FAAP20Q6NZ36 180 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 CEMP1Q6PRD7 247 aaPredicted RBP4.74□□□□□ -1.65
TCF4-228ENST00000565393 ZNF600Q6ZNG1 722 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 LHFPL1Q86WI0 220 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 LILRB2Q8N423 598 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 ZNF114Q8NC26 417 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 Q8WTZ3 238 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 ST8SIA2Q92186 375 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 DIRAS2Q96HU8 199 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 NARS2Q96I59 477 aaKnown RBP4.74□□□□□ -1.65
TCF4-228ENST00000565393 MS4A6AQ9H2W1 248 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 MIXL1Q9H2W2 232 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 TMEM231Q9H6L2 316 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 HEYLQ9NQ87 328 aaPredicted RBP4.74□□□□□ -1.65
TCF4-228ENST00000565393 RABAC1Q9UI14 185 aa4.74□□□□□ -1.65
TCF4-228ENST00000565393 KLK5Q9Y337 293 aaPredicted RBP4.74□□□□□ -1.65
TCF4-228ENST00000565393 TRAV30A0A087WSZ9 112 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms