RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 CD160O95971 181 aa4.33□□□□□ -1.72
SMG1-211ENST00000565324 TMEM54Q969K7 222 aa4.33□□□□□ -1.72
SMG1-211ENST00000565324 SDK2Q58EX2 2172 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 GAGE12BA1L429 117 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 TMEM258P61165 79 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 ABHD12Q8N2K0 398 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 NYNRINQ9P2P1 1898 aaKnown RBP4.32□□□□□ -1.72
SMG1-211ENST00000565324 ZNF205O95201 554 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 TFPI2P48307 235 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 RBMY1FQ15415 496 aaKnown RBP4.32□□□□□ -1.72
SMG1-211ENST00000565324 HEPN1Q6WQI6 88 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 WNT2BQ93097 391 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 KLF17Q5JT82 389 aaPredicted RBP4.32□□□□□ -1.72
SMG1-211ENST00000565324 SSC4DQ8WTU2 575 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 TRAV2A0A0B4J234 112 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 TRAV1-1A0A0B4J248 108 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 ZNHIT1O43257 154 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 AGFG2O95081 481 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 CD28P10747 220 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 Q9H3A6 140 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 LOC105371242A0A075B767 164 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 UPK2O00526 184 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 SAA1P0DJI8 122 aaPredicted RBP4.32□□□□□ -1.72
SMG1-211ENST00000565324 VEGFBP49765 207 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 FOXQ1Q9C009 403 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 MLNRO43193 412 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 ASPHD2Q6ICH7 369 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 NPIPB3Q92617 1050 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 EAF1Q96JC9 268 aaPredicted RBP4.32□□□□□ -1.72
SMG1-211ENST00000565324 GP6Q9HCN6 339 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 CUL9Q8IWT3 2517 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 SIGLEC14Q08ET2 396 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 MESP2Q0VG99 397 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 SCARF2Q96GP6 870 aaPredicted RBP4.32□□□□□ -1.72
SMG1-211ENST00000565324 CCL13Q99616 98 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 TM2D1Q9BX74 207 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 UBR3Q6ZT12 1888 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 AHDC1Q5TGY3 1603 aaPredicted RBP4.32□□□□□ -1.72
SMG1-211ENST00000565324 FOXH1O75593 365 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 DUSP14O95147 198 aaKnown RBP4.32□□□□□ -1.72
SMG1-211ENST00000565324 RPL23P62829 140 aaKnown RBP4.32□□□□□ -1.72
SMG1-211ENST00000565324 FOXL1Q12952 345 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 C1QL3Q5VWW1 255 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 UBE2WQ96B02 151 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 GGTLC1Q9BX51 225 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 ANAPC1Q9H1A4 1944 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 PAPPAQ13219 1627 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 PLXNA4Q9HCM2 1894 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 IL6RP08887 468 aaPredicted RBP4.32□□□□□ -1.72
SMG1-211ENST00000565324 PSG4Q00888 419 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 OR5P3Q8WZ94 311 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 TPTE2P1Q5T6R2 138 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 SLC25A47Q6Q0C1 308 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 SPRED2Q7Z698 418 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 ZNF721Q8TF20 911 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 NEUROG3Q9Y4Z2 214 aa4.32□□□□□ -1.72
SMG1-211ENST00000565324 AHRRA9YTQ3 701 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 F8VVB4 439 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 F8VWA3 439 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 ZP1P60852 638 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 MED12LQ86YW9 2145 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 DCTN5Q9BTE1 182 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 C21orf62Q9NYP8 219 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 PEMTQ9UBM1 199 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 SHANK1Q9Y566 2161 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.31□□□□□ -1.72
SMG1-211ENST00000565324 CCL3P10147 92 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 IFITM1P13164 125 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 ADMP35318 185 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 TRBV24-1A0A075B6N3 115 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 A0A1W2PPE3 182 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 F8WEM9 126 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 SNAI2O43623 268 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 UPK3AO75631 287 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 FAM166AQ6J272 317 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 RTN4RL2Q86UN3 420 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 IFI27L2Q9H2X8 130 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 TRGV2A0A075B6R0 118 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 TGFAP01135 160 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 LHX2P50458 406 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 ST6GALNAC6Q969X2 333 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 GFRA3O60609 400 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 TRACP01848 142 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 UMODP07911 640 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 TMEM144Q7Z5S9 345 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 C9orf40Q8IXQ3 194 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 LAMTOR3Q9UHA4 124 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 TRGV11A0A075B6L2 103 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 TMEM14DPA8MWL7 114 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 PRSS12P56730 875 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 CCL8P80075 99 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 NRN1LQ496H8 165 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 PPP1R27Q86WC6 154 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 WBP1LQ9NX94 342 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 TANC1Q9C0D5 1861 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 C9JCJ5 164 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 ZFP36L2P47974 494 aaKnown RBP4.31□□□□□ -1.72
SMG1-211ENST00000565324 GZMMP51124 257 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 POU2AF1Q16633 256 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 TTTY12Q9BZ98 90 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms