RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 OR10G9Q8NGN4 311 aa12.39□□□□□ -0.43
COMMD4-210ENST00000564587 OR10G7Q8NGN6 311 aa12.39□□□□□ -0.43
COMMD4-210ENST00000564587 ABHD5Q8WTS1 349 aa12.39□□□□□ -0.43
COMMD4-210ENST00000564587 MGST2Q99735 147 aa12.39□□□□□ -0.43
COMMD4-210ENST00000564587 RASL11BQ9BPW5 248 aa12.39□□□□□ -0.43
COMMD4-210ENST00000564587 GGTLC1Q9BX51 225 aa12.39□□□□□ -0.43
COMMD4-210ENST00000564587 SLC39A9Q9NUM3 307 aa12.39□□□□□ -0.43
COMMD4-210ENST00000564587 FAM96BQ9Y3D0 163 aa12.39□□□□□ -0.43
COMMD4-210ENST00000564587 F11RQ9Y624 299 aaKnown RBP12.39□□□□□ -0.43
COMMD4-210ENST00000564587 AGPAT2O15120 278 aa12.38□□□□□ -0.43
COMMD4-210ENST00000564587 HLA-DRB1P01911 266 aa12.38□□□□□ -0.43
COMMD4-210ENST00000564587 FBP1P09467 338 aa12.38□□□□□ -0.43
COMMD4-210ENST00000564587 CD24P25063 80 aa12.38□□□□□ -0.43
COMMD4-210ENST00000564587 PMS2P11Q13670 270 aa12.38□□□□□ -0.43
COMMD4-210ENST00000564587 GAMTQ14353 236 aa12.38□□□□□ -0.43
COMMD4-210ENST00000564587 ACSM6Q6P461 480 aa12.38□□□□□ -0.43
COMMD4-210ENST00000564587 SSMEM1Q8WWF3 244 aa12.38□□□□□ -0.43
COMMD4-210ENST00000564587 RCC1LQ96I51 464 aaKnown RBP12.38□□□□□ -0.43
COMMD4-210ENST00000564587 TREM1Q9NP99 234 aa12.38□□□□□ -0.43
COMMD4-210ENST00000564587 PXMP4Q9Y6I8 212 aa12.38□□□□□ -0.43
COMMD4-210ENST00000564587 CD5P06127 495 aa12.37□□□□□ -0.43
COMMD4-210ENST00000564587 TAGLN2P37802 199 aaKnown RBP12.37□□□□□ -0.43
COMMD4-210ENST00000564587 SSBP2P81877 361 aaPredicted RBP12.37□□□□□ -0.43
COMMD4-210ENST00000564587 GUK1Q16774 197 aa12.37□□□□□ -0.43
COMMD4-210ENST00000564587 SPSB3Q6PJ21 355 aa12.37□□□□□ -0.43
COMMD4-210ENST00000564587 Q8N9W7 124 aa12.37□□□□□ -0.43
COMMD4-210ENST00000564587 BPIFCQ8NFQ6 507 aa12.37□□□□□ -0.43
COMMD4-210ENST00000564587 ARPC1AQ92747 370 aa12.37□□□□□ -0.43
COMMD4-210ENST00000564587 TMEM68Q96MH6 324 aa12.37□□□□□ -0.43
COMMD4-210ENST00000564587 C19orf24Q9BVV8 132 aa12.37□□□□□ -0.43
COMMD4-210ENST00000564587 ITPR2Q14571 2701 aa12.37□□□□□ -0.43
COMMD4-210ENST00000564587 ABCA2Q9BZC7 2435 aa12.36□□□□□ -0.43
COMMD4-210ENST00000564587 TMEM218A2RU14 115 aa12.36□□□□□ -0.43
COMMD4-210ENST00000564587 MAP1LC3B2A6NCE7 125 aa12.36□□□□□ -0.43
COMMD4-210ENST00000564587 NPIPB5A8MRT5 1133 aa12.36□□□□□ -0.43
COMMD4-210ENST00000564587 SEC14L6B5MCN3 397 aa12.36□□□□□ -0.43
COMMD4-210ENST00000564587 RNF223E7ERA6 249 aa12.36□□□□□ -0.43
COMMD4-210ENST00000564587 IFNA1P01562 189 aa12.36□□□□□ -0.43
COMMD4-210ENST00000564587 CRYGCP07315 174 aa12.36□□□□□ -0.43
COMMD4-210ENST00000564587 AREGP15514 252 aa12.36□□□□□ -0.43
COMMD4-210ENST00000564587 CTRB1P17538 263 aa12.36□□□□□ -0.43
COMMD4-210ENST00000564587 B2MP61769 119 aa12.36□□□□□ -0.43
COMMD4-210ENST00000564587 SELENOTP62341 195 aa12.36□□□□□ -0.43
COMMD4-210ENST00000564587 CX3CL1P78423 397 aa12.36□□□□□ -0.43
COMMD4-210ENST00000564587 TMEM249Q2WGJ8 235 aa12.36□□□□□ -0.43
COMMD4-210ENST00000564587 CTRB2Q6GPI1 263 aa12.36□□□□□ -0.43
COMMD4-210ENST00000564587 RPP25LQ8N5L8 163 aaKnown RBP12.36□□□□□ -0.43
COMMD4-210ENST00000564587 NARS2Q96I59 477 aaKnown RBP12.36□□□□□ -0.43
COMMD4-210ENST00000564587 MAP1LC3BQ9GZQ8 125 aa12.36□□□□□ -0.43
COMMD4-210ENST00000564587 VSIRQ9H7M9 311 aa12.36□□□□□ -0.43
COMMD4-210ENST00000564587 SLC45A2Q9UMX9 530 aa12.36□□□□□ -0.43
COMMD4-210ENST00000564587 A0A1W2PPV4 95 aa12.35□□□□□ -0.43
COMMD4-210ENST00000564587 TGFAP01135 160 aa12.35□□□□□ -0.43
COMMD4-210ENST00000564587 REG1AP05451 166 aa12.35□□□□□ -0.43
COMMD4-210ENST00000564587 IGHV4-38-2P0DP08 117 aa12.35□□□□□ -0.43
COMMD4-210ENST00000564587 DEFA4P12838 97 aa12.35□□□□□ -0.43
COMMD4-210ENST00000564587 PAX6P26367 422 aa12.35□□□□□ -0.43
COMMD4-210ENST00000564587 CDC34P49427 236 aaPredicted RBP12.35□□□□□ -0.43
COMMD4-210ENST00000564587 PPT1P50897 306 aa12.35□□□□□ -0.43
COMMD4-210ENST00000564587 FAM120AOSQ5T036 256 aa12.35□□□□□ -0.43
COMMD4-210ENST00000564587 RUSC1-AS1Q66K80 236 aa12.35□□□□□ -0.43
COMMD4-210ENST00000564587 TTC9CQ8N5M4 171 aa12.35□□□□□ -0.43
COMMD4-210ENST00000564587 TEX29Q8N6K0 151 aa12.35□□□□□ -0.43
COMMD4-210ENST00000564587 THAP8Q8NA92 274 aa12.35□□□□□ -0.43
COMMD4-210ENST00000564587 MISP3Q96FF7 219 aa12.35□□□□□ -0.43
COMMD4-210ENST00000564587 RBM14Q96PK6 669 aaKnown RBP12.35□□□□□ -0.43
COMMD4-210ENST00000564587 EIF5A2Q9GZV4 153 aaKnown RBP12.35□□□□□ -0.43
COMMD4-210ENST00000564587 PITPNC1Q9UKF7 332 aa12.35□□□□□ -0.43
COMMD4-210ENST00000564587 MOB4Q9Y3A3 225 aa12.35□□□□□ -0.43
COMMD4-210ENST00000564587 DCHS2Q6V1P9 2916 aa12.35□□□□□ -0.43
COMMD4-210ENST00000564587 A0A0U1RQK1 487 aa12.34□□□□□ -0.43
COMMD4-210ENST00000564587 RBFOX3A6NFN3 312 aa12.34□□□□□ -0.43
COMMD4-210ENST00000564587 M0QZK8 103 aa12.34□□□□□ -0.43
COMMD4-210ENST00000564587 MT-CO2P00403 227 aa12.34□□□□□ -0.43
COMMD4-210ENST00000564587 IGHV4-31P0DP07 118 aa12.34□□□□□ -0.43
COMMD4-210ENST00000564587 PRR20EP86478 221 aa12.34□□□□□ -0.43
COMMD4-210ENST00000564587 PRR20CP86479 221 aa12.34□□□□□ -0.43
COMMD4-210ENST00000564587 PRR20DP86480 221 aa12.34□□□□□ -0.43
COMMD4-210ENST00000564587 PRR20BP86481 221 aa12.34□□□□□ -0.43
COMMD4-210ENST00000564587 PRR20AP86496 221 aa12.34□□□□□ -0.43
COMMD4-210ENST00000564587 MIC13Q5XKP0 118 aa12.34□□□□□ -0.43
COMMD4-210ENST00000564587 CYB5R2Q6BCY4 276 aa12.34□□□□□ -0.43
COMMD4-210ENST00000564587 FAM122CQ6P4D5 195 aa12.34□□□□□ -0.43
COMMD4-210ENST00000564587 LCN15Q6UWW0 184 aa12.34□□□□□ -0.43
COMMD4-210ENST00000564587 RBMS3Q6XE24 437 aaKnown RBP12.34□□□□□ -0.43
COMMD4-210ENST00000564587 C16orf82Q7Z2V1 217 aa12.34□□□□□ -0.43
COMMD4-210ENST00000564587 STPG3Q8N7X2 389 aa12.34□□□□□ -0.43
COMMD4-210ENST00000564587 TMEM116Q8NCL8 245 aa12.34□□□□□ -0.43
COMMD4-210ENST00000564587 ACY3Q96HD9 319 aa12.34□□□□□ -0.43
COMMD4-210ENST00000564587 Q96MF0 132 aa12.34□□□□□ -0.43
COMMD4-210ENST00000564587 LINC00052Q96N35 136 aa12.34□□□□□ -0.43
COMMD4-210ENST00000564587 RNF2Q99496 336 aa12.34□□□□□ -0.43
COMMD4-210ENST00000564587 WNT10AQ9GZT5 417 aa12.34□□□□□ -0.43
COMMD4-210ENST00000564587 FNDC4Q9H6D8 234 aaPredicted RBP12.34□□□□□ -0.43
COMMD4-210ENST00000564587 THYN1Q9P016 225 aa12.34□□□□□ -0.43
COMMD4-210ENST00000564587 PLXNB1O43157 2135 aa12.34□□□□□ -0.43
COMMD4-210ENST00000564587 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.33□□□□□ -0.442e-6■■■□□ 18.1
COMMD4-210ENST00000564587 C2CD3Q4AC94 2353 aa12.33□□□□□ -0.44
COMMD4-210ENST00000564587 IGHV3OR16-10A0A075B7F0 116 aa12.33□□□□□ -0.44
COMMD4-210ENST00000564587 NDUFS6O75380 124 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms