RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-210	ENST00000564582	HDHD3	Q9BSH5	251 aa	Predicted RBP	4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	DERL1	Q9BUN8	251 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	MRPL32	Q9BYC8	188 aa	Known RBP	4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	LINC00470	Q9BZP3	86 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	NPFFR1	Q9GZQ6	430 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	METTL7A	Q9H8H3	244 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	SCRT2	Q9NQ03	307 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	MED29	Q9NX70	200 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	TECR	Q9NZ01	308 aa	Known RBP	4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	MTCH1	Q9NZJ7	389 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	HIGD1B	Q9P298	99 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	MMP17	Q9ULZ9	603 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	RNF24	Q9Y225	148 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	CYSLTR1	Q9Y271	337 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	MPC1	Q9Y5U8	109 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	GOLGA4	Q13439	2230 aa	Known RBP	4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	TDRD6	O60522	2096 aa	Known RBP	4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	EML5	Q05BV3	1969 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	OBSL1	O75147	1896 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	TRAV34	A0A0B4J273	112 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	TRGV8	A0A0C4DH27	118 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582		A0A0G2JLM5	398 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	LOC101059948	A0A1B0GTJ6	334 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582		A0A1W2PR80	420 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	SH2D1B	O14796	132 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	CCL16	O15467	120 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	ZIC3	O60481	467 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	SMPD2	O60906	423 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	WISP2	O76076	250 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	APOA2	P02652	100 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	SMIM13	P0DJ93	91 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	IAPP	P10997	89 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	PSG2	P11465	335 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	HLA-DRB4	P13762	266 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	NPPC	P23582	126 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	NNAT	Q16517	81 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	CLEC12B	Q2HXU8	276 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	CEACAM21	Q3KPI0	293 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	KRTAP27-1	Q3LI81	207 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	ZNF718	Q3SXZ3	478 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582		Q56UQ5	140 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	LINC01545	Q5VT33	79 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	OTP	Q5XKR4	325 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582		Q6AWC8	147 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582		Q6ZSR6	202 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	PRSS41	Q7RTY9	318 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	ZNF611	Q8N823	705 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	ZNF502	Q8TBZ5	544 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	FAM222B	Q8WU58	562 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	H1FX	Q92522	213 aa	Known RBP	4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	CITED2	Q99967	270 aa	Predicted RBP	4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	RTN4R	Q9BZR6	473 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	PLEKHA3	Q9HB20	300 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	FGF22	Q9HCT0	170 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	OCIAD1	Q9NX40	245 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	ERRFI1	Q9UJM3	462 aa	Predicted RBP	4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	KCNS2	Q9ULS6	477 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	POLDIP2	Q9Y2S7	368 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	HLA-DRB4	X5D2U9	266 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	DOCK3	Q8IZD9	2030 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	ARID1A	O14497	2285 aa		4.56	□□□□□ -1.68
CHD9-210	ENST00000564582	CHD3	Q12873	2000 aa	Known RBP	4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	IGKV1D-43	A0A0B4J1Z2	117 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	MUC21	A0A0G2JKD1	596 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	MUC21	A0A140T8X8	626 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582		A0A1W2PPM0	123 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	OR2T8	A6NH00	312 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	PMS2P5	A8MQ11	134 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582		H3BP45	60 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	SPRY3	O43610	288 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	SYNGR3	O43761	229 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	IGKV1D-33	P01593	117 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	IGKV1-33	P01594	117 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	ARL14EPL	P0DKL9	152 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	AZU1	P20160	251 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	FASLG	P48023	281 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	FABP6	P51161	128 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	ERVK11-1	P61568	191 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	ERVK-16	P61578	105 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	HBB	P68871	147 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	PMP22	Q01453	160 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	ARL16	Q0P5N6	197 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	ODF3L2	Q3SX64	289 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	MUC21	Q5SSG8	566 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	WDR82	Q6UXN9	313 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	TCF23	Q7RTU1	214 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	HAPLN4	Q86UW8	402 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	TTC9C	Q8N5M4	171 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	NFAM1	Q8NET5	270 aa	Predicted RBP	4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	OR2T6	Q8NHC8	308 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	GATAD1	Q8WUU5	269 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	NAT6	Q93015	286 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	VGLL1	Q99990	258 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	C1QTNF5	Q9BXJ0	243 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	ENY2	Q9NPA8	101 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	ZNF581	Q9P0T4	197 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	C19orf25	Q9UFG5	118 aa	Predicted RBP	4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	LOXL2	Q9Y4K0	774 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	RFNG	Q9Y644	331 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582	SPCS1	Q9Y6A9	102 aa		4.55	□□□□□ -1.68

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