RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 RNASE2P10153 161 aaKnown RBP13.19□□□□□ -0.3
USB1-209ENST00000564387 SLC25A6P12236 298 aa13.19□□□□□ -0.3
USB1-209ENST00000564387 VAMP1P23763 118 aa13.19□□□□□ -0.3
USB1-209ENST00000564387 ARL3P36405 182 aa13.19□□□□□ -0.3
USB1-209ENST00000564387 SMCO1Q147U7 214 aa13.19□□□□□ -0.3
USB1-209ENST00000564387 SPINK9Q5DT21 86 aa13.19□□□□□ -0.3
USB1-209ENST00000564387 WDR12Q9GZL7 423 aaKnown RBP13.19□□□□□ -0.3
USB1-209ENST00000564387 SAP30O75446 220 aa13.18□□□□□ -0.3
USB1-209ENST00000564387 OR2C1O95371 312 aa13.18□□□□□ -0.3
USB1-209ENST00000564387 IGLV1-51P01701 117 aa13.18□□□□□ -0.3
USB1-209ENST00000564387 CSN3P07498 182 aa13.18□□□□□ -0.3
USB1-209ENST00000564387 SNCAP37840 140 aa13.18□□□□□ -0.3
USB1-209ENST00000564387 ZNF846Q147U1 533 aa13.18□□□□□ -0.3
USB1-209ENST00000564387 OR4C12Q96R67 309 aa13.18□□□□□ -0.3
USB1-209ENST00000564387 C21orf62Q9NYP8 219 aa13.18□□□□□ -0.3
USB1-209ENST00000564387 HSPB7Q9UBY9 170 aa13.18□□□□□ -0.3
USB1-209ENST00000564387 TMED3Q9Y3Q3 217 aa13.18□□□□□ -0.3
USB1-209ENST00000564387 WI2-2373I1.2A0A1W2PRP0 233 aa13.17□□□□□ -0.3
USB1-209ENST00000564387 K7EIL1 84 aa13.17□□□□□ -0.3
USB1-209ENST00000564387 TGOLN2O43493 480 aa13.17□□□□□ -0.3
USB1-209ENST00000564387 OR4E1P0C645 316 aa13.17□□□□□ -0.3
USB1-209ENST00000564387 TNFRSF9Q07011 255 aa13.17□□□□□ -0.3
USB1-209ENST00000564387 SPSB3Q6PJ21 355 aa13.17□□□□□ -0.3
USB1-209ENST00000564387 ADAMTSL5Q6ZMM2 481 aa13.17□□□□□ -0.3
USB1-209ENST00000564387 BSCL2Q96G97 398 aaPredicted RBP13.17□□□□□ -0.3
USB1-209ENST00000564387 TXN2Q99757 166 aa13.17□□□□□ -0.3
USB1-209ENST00000564387 TBC1D24Q9ULP9 559 aa13.17□□□□□ -0.3
USB1-209ENST00000564387 A8MWP6 167 aa13.16□□□□□ -0.3
USB1-209ENST00000564387 TCRBP04435 133 aa13.16□□□□□ -0.3
USB1-209ENST00000564387 GPR183P32249 361 aa13.16□□□□□ -0.3
USB1-209ENST00000564387 HTR2BP41595 481 aa13.16□□□□□ -0.3
USB1-209ENST00000564387 HOXA1P49639 335 aaPredicted RBP13.16□□□□□ -0.3
USB1-209ENST00000564387 SUB1P53999 127 aaKnown RBP eCLIP13.16□□□□□ -0.3
USB1-209ENST00000564387 DHRS2Q13268 280 aa13.16□□□□□ -0.3
USB1-209ENST00000564387 ASAH1Q13510 395 aa13.16□□□□□ -0.3
USB1-209ENST00000564387 LYG2Q86SG7 212 aa13.16□□□□□ -0.3
USB1-209ENST00000564387 ZNF414Q96IQ9 312 aa13.16□□□□□ -0.3
USB1-209ENST00000564387 ZNF436Q9C0F3 470 aaPredicted RBP13.16□□□□□ -0.3
USB1-209ENST00000564387 PEMTQ9UBM1 199 aa13.16□□□□□ -0.3
USB1-209ENST00000564387 CORTO00230 105 aa13.15□□□□□ -0.3
USB1-209ENST00000564387 UPK1BO75841 260 aa13.15□□□□□ -0.3
USB1-209ENST00000564387 MT-CO2P00403 227 aa13.15□□□□□ -0.3
USB1-209ENST00000564387 CTSGP08311 255 aa13.15□□□□□ -0.3
USB1-209ENST00000564387 ANXA7P20073 488 aaKnown RBP13.15□□□□□ -0.3
USB1-209ENST00000564387 ADMP35318 185 aa13.15□□□□□ -0.3
USB1-209ENST00000564387 IFITM3Q01628 133 aa13.15□□□□□ -0.3
USB1-209ENST00000564387 FAM106AQ4KMX7 169 aa13.15□□□□□ -0.3
USB1-209ENST00000564387 C2orf83Q53S99 150 aa13.15□□□□□ -0.3
USB1-209ENST00000564387 PLET1Q6UQ28 207 aa13.15□□□□□ -0.3
USB1-209ENST00000564387 C20orf85Q9H1P6 137 aa13.15□□□□□ -0.3
USB1-209ENST00000564387 ENY2Q9NPA8 101 aa13.15□□□□□ -0.3
USB1-209ENST00000564387 GAR1Q9NY12 217 aaKnown RBP13.15□□□□□ -0.3
USB1-209ENST00000564387 ZNF256Q9Y2P7 627 aaPredicted RBP13.15□□□□□ -0.3
USB1-209ENST00000564387 IGHV3-21A0A0B4J1V1 117 aa13.14□□□□□ -0.31
USB1-209ENST00000564387 OR2T8A6NH00 312 aa13.14□□□□□ -0.31
USB1-209ENST00000564387 FAM90A26D6RGX4 464 aa13.14□□□□□ -0.31
USB1-209ENST00000564387 MFAP4P55083 255 aa13.14□□□□□ -0.31
USB1-209ENST00000564387 TMEM170AQ8WVE7 144 aa13.14□□□□□ -0.31
USB1-209ENST00000564387 MISP3Q96FF7 219 aa13.14□□□□□ -0.31
USB1-209ENST00000564387 CHRDL1Q9BU40 450 aa13.14□□□□□ -0.31
USB1-209ENST00000564387 SORL1Q92673 2214 aa13.13□□□□□ -0.31
USB1-209ENST00000564387 TGP01266 2768 aa13.13□□□□□ -0.31
USB1-209ENST00000564387 C2orf70A6NJV1 201 aa13.13□□□□□ -0.31
USB1-209ENST00000564387 ELLP55199 621 aaPredicted RBP13.13□□□□□ -0.31
USB1-209ENST00000564387 GGNBP1Q5YKI7 109 aa13.13□□□□□ -0.31
USB1-209ENST00000564387 MRAPQ8TCY5 172 aa13.13□□□□□ -0.31
USB1-209ENST00000564387 MITD1Q8WV92 249 aa13.13□□□□□ -0.31
USB1-209ENST00000564387 FNDC4Q9H6D8 234 aaPredicted RBP13.13□□□□□ -0.31
USB1-209ENST00000564387 HEYLQ9NQ87 328 aaPredicted RBP13.13□□□□□ -0.31
USB1-209ENST00000564387 LSM4Q9Y4Z0 139 aaKnown RBP13.13□□□□□ -0.31
USB1-209ENST00000564387 TMEM213A2RRL7 107 aa13.12□□□□□ -0.31
USB1-209ENST00000564387 CEBPZOSA8MTT3 80 aa13.12□□□□□ -0.31
USB1-209ENST00000564387 C8orf88P0DMB2 117 aa13.12□□□□□ -0.31
USB1-209ENST00000564387 SPNP16150 400 aa13.12□□□□□ -0.31
USB1-209ENST00000564387 ATP5IP56385 69 aaPredicted RBP13.12□□□□□ -0.31
USB1-209ENST00000564387 MZT2BQ6NZ67 158 aa13.12□□□□□ -0.31
USB1-209ENST00000564387 UNQ9165/PRO28630Q6UXU0 137 aa13.12□□□□□ -0.31
USB1-209ENST00000564387 SLC24A4Q8NFF2 622 aa13.12□□□□□ -0.31
USB1-209ENST00000564387 OR2K2Q8NGT1 345 aa13.12□□□□□ -0.31
USB1-209ENST00000564387 OR1S1Q8NH92 325 aa13.12□□□□□ -0.31
USB1-209ENST00000564387 COQ8AQ8NI60 647 aa13.12□□□□□ -0.31
USB1-209ENST00000564387 RNASEH2CQ8TDP1 164 aaKnown RBP13.12□□□□□ -0.31
USB1-209ENST00000564387 HIPK2Q9H2X6 1198 aa13.12□□□□□ -0.31
USB1-209ENST00000564387 RBKSQ9H477 322 aa13.12□□□□□ -0.31
USB1-209ENST00000564387 ZC4H2Q9NQZ6 224 aa13.12□□□□□ -0.31
USB1-209ENST00000564387 U3KQ87 197 aa13.12□□□□□ -0.31
USB1-209ENST00000564387 NDUFA4O00483 81 aa13.11□□□□□ -0.31
USB1-209ENST00000564387 HOXB5P09067 269 aa13.11□□□□□ -0.31
USB1-209ENST00000564387 FOLR2P14207 255 aa13.11□□□□□ -0.31
USB1-209ENST00000564387 CBLN1P23435 193 aa13.11□□□□□ -0.31
USB1-209ENST00000564387 C4orf46Q504U0 113 aa13.11□□□□□ -0.31
USB1-209ENST00000564387 DTD1Q8TEA8 209 aa13.11□□□□□ -0.31
USB1-209ENST00000564387 TMEM190Q8WZ59 177 aa13.11□□□□□ -0.31
USB1-209ENST00000564387 PINX1Q96BK5 328 aaKnown RBP13.11□□□□□ -0.31
USB1-209ENST00000564387 PRR25Q96S07 402 aa13.11□□□□□ -0.31
USB1-209ENST00000564387 NUDT15Q9NV35 164 aa13.11□□□□□ -0.31
USB1-209ENST00000564387 FAM240BA0A1B0GVZ2 78 aa13.1□□□□□ -0.31
USB1-209ENST00000564387 ADAP1O75689 374 aa13.1□□□□□ -0.31
USB1-209ENST00000564387 NXPH3O95157 252 aa13.1□□□□□ -0.31
USB1-209ENST00000564387 GP9P14770 177 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms