RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 IL36RNQ9UBH0 155 aa9.13□□□□□ -0.95
TCF4-222ENST00000564228 SMIM27A0A1W2PRY6 76 aa9.12□□□□□ -0.95
TCF4-222ENST00000564228 GAGE12BA1L429 117 aa9.12□□□□□ -0.95
TCF4-222ENST00000564228 ZNF503-AS2A6NEH8 195 aa9.12□□□□□ -0.95
TCF4-222ENST00000564228 ISLRO14498 428 aa9.12□□□□□ -0.95
TCF4-222ENST00000564228 CLDN14O95500 239 aa9.12□□□□□ -0.95
TCF4-222ENST00000564228 CGAP01215 116 aa9.12□□□□□ -0.95
TCF4-222ENST00000564228 NTF3P20783 257 aa9.12□□□□□ -0.95
TCF4-222ENST00000564228 SMIM21Q3B7S5 101 aa9.12□□□□□ -0.95
TCF4-222ENST00000564228 MPV17L2Q567V2 206 aa9.12□□□□□ -0.95
TCF4-222ENST00000564228 GCSAMLQ5JQS6 135 aa9.12□□□□□ -0.95
TCF4-222ENST00000564228 FAM162BQ5T6X4 162 aa9.12□□□□□ -0.95
TCF4-222ENST00000564228 LHFPL4Q7Z7J7 247 aa9.12□□□□□ -0.95
TCF4-222ENST00000564228 FAM19A2Q8N3H0 131 aa9.12□□□□□ -0.95
TCF4-222ENST00000564228 IL1F10Q8WWZ1 152 aa9.12□□□□□ -0.95
TCF4-222ENST00000564228 MEGF9Q9H1U4 602 aa9.12□□□□□ -0.95
TCF4-222ENST00000564228 PEF1Q9UBV8 284 aaKnown RBP9.12□□□□□ -0.95
TCF4-222ENST00000564228 EPG5Q9HCE0 2579 aa9.12□□□□□ -0.95
TCF4-222ENST00000564228 A0A0G2JNJ9 132 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 OR2T8A6NH00 312 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 C2orf70A6NJV1 201 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 C15orf62A8K5M9 175 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 HSBP1O75506 76 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 EDDM3BP56851 147 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 IGFBP7Q16270 282 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 KIAA1644Q3SXP7 199 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 AMMECR1LQ6DCA0 310 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 EBLN2Q6P2I7 272 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 CXorf67Q86X51 503 aaPredicted RBP9.11□□□□□ -0.95
TCF4-222ENST00000564228 ZNF645Q8N7E2 425 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 WDR31Q8NA23 367 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 Q9UFV3 132 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 IZUMO1RA6ND01 250 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 M0R2Z0 102 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 RRHO14718 337 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 SMAD7O15105 426 aaKnown RBP9.11□□□□□ -0.95
TCF4-222ENST00000564228 CRXO43186 299 aaPredicted RBP9.11□□□□□ -0.95
TCF4-222ENST00000564228 IGLC1P0CG04 106 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 GNG4P50150 75 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 GPM6AP51674 278 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 RELBQ01201 579 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 CATR1Q13166 79 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 EIF4EBP1Q13541 118 aaPredicted RBP9.11□□□□□ -0.95
TCF4-222ENST00000564228 Q56UQ5 140 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 OR4S2Q8NH73 311 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 SLC25A40Q8TBP6 338 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 NEUROG1Q92886 237 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 ZNF430Q9H8G1 570 aaPredicted RBP9.11□□□□□ -0.95
TCF4-222ENST00000564228 SAP30LQ9HAJ7 183 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 WASHC3Q9Y3C0 194 aa9.11□□□□□ -0.95
TCF4-222ENST00000564228 CCNOP22674 350 aa9.1□□□□□ -0.95
TCF4-222ENST00000564228 HOXC12P31275 282 aa9.1□□□□□ -0.95
TCF4-222ENST00000564228 G6PCP35575 357 aa9.1□□□□□ -0.95
TCF4-222ENST00000564228 PSG9Q00887 426 aa9.1□□□□□ -0.95
TCF4-222ENST00000564228 MRPL49Q13405 166 aaKnown RBP9.1□□□□□ -0.95
TCF4-222ENST00000564228 GABRA6Q16445 453 aa9.1□□□□□ -0.95
TCF4-222ENST00000564228 CENPWQ5EE01 88 aa9.1□□□□□ -0.95
TCF4-222ENST00000564228 SPATA46Q5T0L3 261 aa9.1□□□□□ -0.95
TCF4-222ENST00000564228 SLC25A34Q6PIV7 304 aa9.1□□□□□ -0.95
TCF4-222ENST00000564228 NANOS1Q8WY41 292 aaKnown RBP9.1□□□□□ -0.95
TCF4-222ENST00000564228 TMEM70Q9BUB7 260 aa9.1□□□□□ -0.95
TCF4-222ENST00000564228 GGTLC1Q9BX51 225 aa9.1□□□□□ -0.95
TCF4-222ENST00000564228 COMMD5Q9GZQ3 224 aa9.1□□□□□ -0.95
TCF4-222ENST00000564228 ZFYVE26Q68DK2 2539 aa9.1□□□□□ -0.95
TCF4-222ENST00000564228 HIVEP3Q5T1R4 2406 aa9.1□□□□□ -0.95
TCF4-222ENST00000564228 NUDT3O95989 172 aa9.09□□□□□ -0.95
TCF4-222ENST00000564228 CCL2P13500 99 aa9.09□□□□□ -0.95
TCF4-222ENST00000564228 CRYBB3P26998 211 aa9.09□□□□□ -0.95
TCF4-222ENST00000564228 BMI1P35226 326 aa9.09□□□□□ -0.95
TCF4-222ENST00000564228 PAX2Q02962 417 aa9.09□□□□□ -0.95
TCF4-222ENST00000564228 TNXAQ16473 311 aa9.09□□□□□ -0.95
TCF4-222ENST00000564228 TIGITQ495A1 244 aa9.09□□□□□ -0.95
TCF4-222ENST00000564228 PDLIM3Q53GG5 364 aaPredicted RBP9.09□□□□□ -0.95
TCF4-222ENST00000564228 MRPL54Q6P161 138 aaKnown RBP9.09□□□□□ -0.95
TCF4-222ENST00000564228 ZNF474Q6S9Z5 364 aaPredicted RBP9.09□□□□□ -0.95
TCF4-222ENST00000564228 ZNF497Q6ZNH5 498 aa9.09□□□□□ -0.95
TCF4-222ENST00000564228 MDP1Q86V88 176 aa9.09□□□□□ -0.95
TCF4-222ENST00000564228 RND1Q92730 232 aa9.09□□□□□ -0.95
TCF4-222ENST00000564228 VKORC1Q9BQB6 163 aa9.09□□□□□ -0.95
TCF4-222ENST00000564228 ZNF331Q9NQX6 463 aaPredicted RBP9.09□□□□□ -0.95
TCF4-222ENST00000564228 MBNL3Q9NUK0 354 aaKnown RBP9.09□□□□□ -0.95
TCF4-222ENST00000564228 HELTA6NFD8 242 aa9.09□□□□□ -0.95
TCF4-222ENST00000564228 G3V4G9 280 aa9.09□□□□□ -0.95
TCF4-222ENST00000564228 CCL21O00585 134 aa9.09□□□□□ -0.95
TCF4-222ENST00000564228 SYNGR1O43759 233 aa9.09□□□□□ -0.95
TCF4-222ENST00000564228 OR2J3O76001 311 aa9.09□□□□□ -0.95
TCF4-222ENST00000564228 USF1P22415 310 aaPredicted RBP9.09□□□□□ -0.95
TCF4-222ENST00000564228 S100A7P31151 101 aa9.09□□□□□ -0.95
TCF4-222ENST00000564228 CA7P43166 264 aa9.09□□□□□ -0.95
TCF4-222ENST00000564228 PLP2Q04941 152 aa9.09□□□□□ -0.95
TCF4-222ENST00000564228 BHLHA15Q7RTS1 189 aaPredicted RBP9.09□□□□□ -0.95
TCF4-222ENST00000564228 H2BFWTQ7Z2G1 175 aa9.09□□□□□ -0.95
TCF4-222ENST00000564228 FER1L6-AS1Q8NA97 138 aa9.09□□□□□ -0.95
TCF4-222ENST00000564228 MGST2Q99735 147 aa9.09□□□□□ -0.95
TCF4-222ENST00000564228 PKIBQ9C010 78 aa9.09□□□□□ -0.95
TCF4-222ENST00000564228 SLC25A10Q9UBX3 287 aaPredicted RBP9.09□□□□□ -0.95
TCF4-222ENST00000564228 SMG1Q96Q15 3661 aaKnown RBP9.09□□□□□ -0.95
TCF4-222ENST00000564228 MUC21A0A0G2JKD1 596 aa9.08□□□□□ -0.96
TCF4-222ENST00000564228 MUC21A0A140T8X8 626 aa9.08□□□□□ -0.96
TCF4-222ENST00000564228 C5orf49A4QMS7 147 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms