RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 CELSR1Q9NYQ6 3014 aa10.09□□□□□ -0.79
CLK3-214ENST00000564096 BORCS7-ASMTA0A0B4J1R7 106 aa10.09□□□□□ -0.79
CLK3-214ENST00000564096 SCGB2A1O75556 95 aa10.09□□□□□ -0.79
CLK3-214ENST00000564096 EGR2P11161 476 aaPredicted RBP10.09□□□□□ -0.79
CLK3-214ENST00000564096 CXCL2P19875 107 aa10.09□□□□□ -0.79
CLK3-214ENST00000564096 EIF5AP63241 154 aaKnown RBP10.09□□□□□ -0.79
CLK3-214ENST00000564096 DLK1P80370 383 aa10.09□□□□□ -0.79
CLK3-214ENST00000564096 ATP6V1FQ16864 119 aa10.09□□□□□ -0.79
CLK3-214ENST00000564096 ASPHD1Q5U4P2 390 aa10.09□□□□□ -0.79
CLK3-214ENST00000564096 SLC25A24Q6NUK1 477 aa10.09□□□□□ -0.79
CLK3-214ENST00000564096 TMUB2Q71RG4 321 aa10.09□□□□□ -0.79
CLK3-214ENST00000564096 Q8N2B8 174 aa10.09□□□□□ -0.79
CLK3-214ENST00000564096 MISP3Q96FF7 219 aa10.09□□□□□ -0.79
CLK3-214ENST00000564096 SLC35E1Q96K37 410 aa10.09□□□□□ -0.79
CLK3-214ENST00000564096 TMEM147Q9BVK8 224 aa10.09□□□□□ -0.79
CLK3-214ENST00000564096 WNT10AQ9GZT5 417 aa10.09□□□□□ -0.79
CLK3-214ENST00000564096 ZNF355PQ9NSJ1 428 aa10.09□□□□□ -0.79
CLK3-214ENST00000564096 SONP18583 2426 aaKnown RBP10.09□□□□□ -0.79
CLK3-214ENST00000564096 IFNA5P01569 189 aa10.08□□□□□ -0.8
CLK3-214ENST00000564096 CLINT1Q14677 625 aa10.08□□□□□ -0.8
CLK3-214ENST00000564096 SLC16A13Q7RTY0 426 aa10.08□□□□□ -0.8
CLK3-214ENST00000564096 SMIM3Q9BZL3 60 aa10.08□□□□□ -0.8
CLK3-214ENST00000564096 UQCC1Q9NVA1 299 aa10.08□□□□□ -0.8
CLK3-214ENST00000564096 SVEP1Q4LDE5 3571 aa10.07□□□□□ -0.8
CLK3-214ENST00000564096 SMCO3A2RU48 225 aa10.07□□□□□ -0.8
CLK3-214ENST00000564096 FNDC10F2Z333 226 aa10.07□□□□□ -0.8
CLK3-214ENST00000564096 G3V318 75 aa10.07□□□□□ -0.8
CLK3-214ENST00000564096 JTBO76095 146 aa10.07□□□□□ -0.8
CLK3-214ENST00000564096 GPX4P36969 197 aaPredicted RBP10.07□□□□□ -0.8
CLK3-214ENST00000564096 NHLH2Q02577 135 aa10.07□□□□□ -0.8
CLK3-214ENST00000564096 AKR1C1Q04828 323 aa10.07□□□□□ -0.8
CLK3-214ENST00000564096 CD69Q07108 199 aa10.07□□□□□ -0.8
CLK3-214ENST00000564096 LGALSLQ3ZCW2 172 aaPredicted RBP10.07□□□□□ -0.8
CLK3-214ENST00000564096 C19orf54Q5BKX5 351 aa10.07□□□□□ -0.8
CLK3-214ENST00000564096 PVRIGQ6DKI7 326 aa10.07□□□□□ -0.8
CLK3-214ENST00000564096 OR5T1Q8NG75 326 aa10.07□□□□□ -0.8
CLK3-214ENST00000564096 TMEM170AQ8WVE7 144 aa10.07□□□□□ -0.8
CLK3-214ENST00000564096 CACNG8Q8WXS5 425 aa10.07□□□□□ -0.8
CLK3-214ENST00000564096 ZNF471Q9BX82 626 aaPredicted RBP10.07□□□□□ -0.8
CLK3-214ENST00000564096 SLA2Q9H6Q3 261 aa10.07□□□□□ -0.8
CLK3-214ENST00000564096 F8P00451 2351 aa10.07□□□□□ -0.8
CLK3-214ENST00000564096 C2CD3Q4AC94 2353 aa10.06□□□□□ -0.8
CLK3-214ENST00000564096 ANK3Q12955 4377 aaKnown RBP10.06□□□□□ -0.8
CLK3-214ENST00000564096 IGLV11-55A0A075B6I3 123 aa10.06□□□□□ -0.8
CLK3-214ENST00000564096 UBE2L5PA0A1B0GUS4 154 aa10.06□□□□□ -0.8
CLK3-214ENST00000564096 TMEM89A2RUT3 159 aa10.06□□□□□ -0.8
CLK3-214ENST00000564096 FAM223BA6NKX1 122 aa10.06□□□□□ -0.8
CLK3-214ENST00000564096 LINC01548A6NM66 108 aa10.06□□□□□ -0.8
CLK3-214ENST00000564096 PMS2P5A8MQ11 134 aa10.06□□□□□ -0.8
CLK3-214ENST00000564096 BRI3O95415 125 aa10.06□□□□□ -0.8
CLK3-214ENST00000564096 OPCMLQ14982 345 aa10.06□□□□□ -0.8
CLK3-214ENST00000564096 TMEM95Q3KNT9 176 aa10.06□□□□□ -0.8
CLK3-214ENST00000564096 SLC51BQ86UW2 128 aa10.06□□□□□ -0.8
CLK3-214ENST00000564096 HAPLN4Q86UW8 402 aa10.06□□□□□ -0.8
CLK3-214ENST00000564096 FAM223AQ8IWN6 122 aa10.06□□□□□ -0.8
CLK3-214ENST00000564096 COMMD1Q8N668 190 aa10.06□□□□□ -0.8
CLK3-214ENST00000564096 NECAP1Q8NC96 275 aa10.06□□□□□ -0.8
CLK3-214ENST00000564096 NOL4LQ96MY1 436 aaPredicted RBP10.06□□□□□ -0.8
CLK3-214ENST00000564096 KCNIP2Q9NS61 270 aa10.06□□□□□ -0.8
CLK3-214ENST00000564096 LINC00527Q9UJ94 153 aa10.06□□□□□ -0.8
CLK3-214ENST00000564096 HIVEP1P15822 2718 aa10.06□□□□□ -0.8
CLK3-214ENST00000564096 PSMB11A5LHX3 300 aa10.05□□□□□ -0.8
CLK3-214ENST00000564096 PRSS46E5RG02 174 aa10.05□□□□□ -0.8
CLK3-214ENST00000564096 NDUFA7O95182 113 aa10.05□□□□□ -0.8
CLK3-214ENST00000564096 MT-CO2P00403 227 aa10.05□□□□□ -0.8
CLK3-214ENST00000564096 TPT1P13693 172 aaKnown RBP10.05□□□□□ -0.8
CLK3-214ENST00000564096 VWC2Q2TAL6 325 aa10.05□□□□□ -0.8
CLK3-214ENST00000564096 LAMTOR1Q6IAA8 161 aa10.05□□□□□ -0.8
CLK3-214ENST00000564096 Q6ZS46 218 aa10.05□□□□□ -0.8
CLK3-214ENST00000564096 C19orf35Q6ZS72 473 aa10.05□□□□□ -0.8
CLK3-214ENST00000564096 Q6ZSV7 163 aa10.05□□□□□ -0.8
CLK3-214ENST00000564096 OR4F5Q8NH21 305 aa10.05□□□□□ -0.8
CLK3-214ENST00000564096 SCGB1C1Q8TD33 95 aa10.05□□□□□ -0.8
CLK3-214ENST00000564096 CXorf58Q96LI9 332 aa10.05□□□□□ -0.8
CLK3-214ENST00000564096 MPDU1O75352 247 aa10.04□□□□□ -0.8
CLK3-214ENST00000564096 OR2J3O76001 311 aa10.04□□□□□ -0.8
CLK3-214ENST00000564096 PRH1P02810 166 aa10.04□□□□□ -0.8
CLK3-214ENST00000564096 TRGV3P03979 118 aa10.04□□□□□ -0.8
CLK3-214ENST00000564096 PF4V1P10720 104 aa10.04□□□□□ -0.8
CLK3-214ENST00000564096 PPIFP30405 207 aaKnown RBP10.04□□□□□ -0.8
CLK3-214ENST00000564096 MFAP2P55001 183 aa10.04□□□□□ -0.8
CLK3-214ENST00000564096 TPPP2P59282 170 aa10.04□□□□□ -0.8
CLK3-214ENST00000564096 RHOGP84095 191 aa10.04□□□□□ -0.8
CLK3-214ENST00000564096 CFHR3Q02985 330 aa10.04□□□□□ -0.8
CLK3-214ENST00000564096 ARL16Q0P5N6 197 aa10.04□□□□□ -0.8
CLK3-214ENST00000564096 RAB31Q13636 194 aa10.04□□□□□ -0.8
CLK3-214ENST00000564096 KLK9Q2XQG4 91 aa10.04□□□□□ -0.8
CLK3-214ENST00000564096 EIF5AL1Q6IS14 154 aaKnown RBP10.04□□□□□ -0.8
CLK3-214ENST00000564096 TEX38Q6PEX7 206 aa10.04□□□□□ -0.8
CLK3-214ENST00000564096 UBAC2Q8NBM4 344 aa10.04□□□□□ -0.8
CLK3-214ENST00000564096 OR4X2Q8NGF9 303 aa10.04□□□□□ -0.8
CLK3-214ENST00000564096 STOML3Q8TAV4 291 aa10.04□□□□□ -0.8
CLK3-214ENST00000564096 VN1R17PQ8TDU5 208 aa10.04□□□□□ -0.8
CLK3-214ENST00000564096 USMG5Q96IX5 58 aa10.04□□□□□ -0.8
CLK3-214ENST00000564096 PARD6GQ9BYG4 376 aaPredicted RBP10.04□□□□□ -0.8
CLK3-214ENST00000564096 C16orf95Q9H693 158 aa10.04□□□□□ -0.8
CLK3-214ENST00000564096 GAR1Q9NY12 217 aaKnown RBP10.04□□□□□ -0.8
CLK3-214ENST00000564096 FBXL7Q9UJT9 491 aa10.04□□□□□ -0.8
CLK3-214ENST00000564096 KLK9Q9UKQ9 250 aa10.04□□□□□ -0.8
CLK3-214ENST00000564096 TET2Q6N021 2002 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms