RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 Q6ZN92 141 aa8.65□□□□□ -1.02
RNF40-204ENST00000563683 OR2D3Q8NGH3 330 aa8.65□□□□□ -1.02
RNF40-204ENST00000563683 NABP2Q9BQ15 211 aa8.65□□□□□ -1.02
RNF40-204ENST00000563683 SFXN3Q9BWM7 321 aa8.65□□□□□ -1.02
RNF40-204ENST00000563683 SAA2-SAA4A0A096LPE2 208 aa8.65□□□□□ -1.03
RNF40-204ENST00000563683 NPIPB11E5RHQ5 1161 aa8.65□□□□□ -1.03
RNF40-204ENST00000563683 SAA2P0DJI9 122 aaPredicted RBP8.65□□□□□ -1.03
RNF40-204ENST00000563683 OR8I2Q8N0Y5 310 aa8.65□□□□□ -1.03
RNF40-204ENST00000563683 FAM122AQ96E09 287 aa8.65□□□□□ -1.03
RNF40-204ENST00000563683 PLSCR4Q9NRQ2 329 aa8.65□□□□□ -1.03
RNF40-204ENST00000563683 TRAV3A0A0B4J244 114 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 SRRM5B3KS81 715 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 HSBP1L1C9JCN9 74 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 CGAP01215 116 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 NPPCP23582 126 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 MMDQ15546 238 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 KIAA1644Q3SXP7 199 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 PDPNQ86YL7 162 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 OR1L4Q8NGR5 311 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 GNB4Q9HAV0 340 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 IL36BQ9NZH7 164 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 LAMTOR2Q9Y2Q5 125 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 H3BTX0 84 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 K7EQM0 130 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 CBLN1P23435 193 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 WDR31Q8NA23 367 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 RAB1CQ92928 201 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 SCO2A0A1W2PP80 73 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 SLC17A3O00476 420 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 GCHFRP30047 84 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 RPRMLQ8N4K4 120 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 ZNF738Q8NE65 137 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 NPIPB3Q92617 1050 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 A0A1W2PNU3 283 aaPredicted RBP8.64□□□□□ -1.03
RNF40-204ENST00000563683 TIMP3P35625 211 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 COX19Q49B96 90 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 ETFRF1Q6IPR1 90 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 S100A7AQ86SG5 101 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 DOLPP1Q86YN1 238 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 MBNL3Q9NUK0 354 aaKnown RBP8.64□□□□□ -1.03
RNF40-204ENST00000563683 BET1LQ9NYM9 111 aa8.64□□□□□ -1.03
RNF40-204ENST00000563683 CHD3Q12873 2000 aaKnown RBP8.63□□□□□ -1.03
RNF40-204ENST00000563683 EXPH5Q8NEV8 1989 aa8.63□□□□□ -1.03
RNF40-204ENST00000563683 CCL21O00585 134 aa8.63□□□□□ -1.03
RNF40-204ENST00000563683 CT45A10P0DMU9 189 aa8.63□□□□□ -1.03
RNF40-204ENST00000563683 BSPH1Q075Z2 132 aa8.63□□□□□ -1.03
RNF40-204ENST00000563683 HLA-DRB5Q30154 266 aa8.63□□□□□ -1.03
RNF40-204ENST00000563683 PAXXQ9BUH6 204 aa8.63□□□□□ -1.03
RNF40-204ENST00000563683 HILPDAQ9Y5L2 63 aa8.63□□□□□ -1.03
RNF40-204ENST00000563683 NOTCH3Q9UM47 2321 aa8.63□□□□□ -1.03
RNF40-204ENST00000563683 IGKV3-15P01624 115 aa8.63□□□□□ -1.03
RNF40-204ENST00000563683 MT-ND6P03923 174 aa8.63□□□□□ -1.03
RNF40-204ENST00000563683 MYOD1P15172 320 aa8.63□□□□□ -1.03
RNF40-204ENST00000563683 CDKN1BP46527 198 aa8.63□□□□□ -1.03
RNF40-204ENST00000563683 WDR73Q6P4I2 378 aa8.63□□□□□ -1.03
RNF40-204ENST00000563683 Q6ZR03 302 aa8.63□□□□□ -1.03
RNF40-204ENST00000563683 TP53TG3Q9ULZ0 132 aa8.63□□□□□ -1.03
RNF40-204ENST00000563683 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.63□□□□□ -1.03
RNF40-204ENST00000563683 FAM90A1Q86YD7 464 aa8.63□□□□□ -1.03
RNF40-204ENST00000563683 IGKV1D-17A0A075B6S4 117 aa8.62□□□□□ -1.03
RNF40-204ENST00000563683 SERTM2A0A1B0GWG4 89 aa8.62□□□□□ -1.03
RNF40-204ENST00000563683 GPX1P07203 203 aa8.62□□□□□ -1.03
RNF40-204ENST00000563683 RBX1P62877 108 aa8.62□□□□□ -1.03
RNF40-204ENST00000563683 UBE2V1Q13404 147 aa8.62□□□□□ -1.03
RNF40-204ENST00000563683 RNASEKQ6P5S7 137 aaKnown RBP8.62□□□□□ -1.03
RNF40-204ENST00000563683 LINC01560Q8TB33 94 aa8.62□□□□□ -1.03
RNF40-204ENST00000563683 SLC25A15Q9Y619 301 aa8.62□□□□□ -1.03
RNF40-204ENST00000563683 RBFOX2O43251 390 aaKnown RBP eCLIP8.62□□□□□ -1.031e-7■■■■□ 26.4
RNF40-204ENST00000563683 RPL27AP46776 148 aaKnown RBP8.62□□□□□ -1.03
RNF40-204ENST00000563683 MFAP2P55001 183 aa8.62□□□□□ -1.03
RNF40-204ENST00000563683 OR4C13Q8NGP0 309 aa8.62□□□□□ -1.03
RNF40-204ENST00000563683 PRR7Q8TB68 274 aa8.62□□□□□ -1.03
RNF40-204ENST00000563683 WDR83OSQ9Y284 106 aa8.62□□□□□ -1.03
RNF40-204ENST00000563683 K7EP13 123 aa8.62□□□□□ -1.03
RNF40-204ENST00000563683 WISP2O76076 250 aa8.62□□□□□ -1.03
RNF40-204ENST00000563683 USF1P22415 310 aaPredicted RBP8.62□□□□□ -1.03
RNF40-204ENST00000563683 CSN1S1P47710 185 aa8.62□□□□□ -1.03
RNF40-204ENST00000563683 MIR17HGQ75NE6 70 aa8.62□□□□□ -1.03
RNF40-204ENST00000563683 STPG4Q8N801 248 aa8.62□□□□□ -1.03
RNF40-204ENST00000563683 DERL1Q9BUN8 251 aa8.62□□□□□ -1.03
RNF40-204ENST00000563683 GNB1LQ9BYB4 327 aa8.62□□□□□ -1.03
RNF40-204ENST00000563683 MRPL20Q9BYC9 149 aaKnown RBP8.62□□□□□ -1.03
RNF40-204ENST00000563683 FBXL7Q9UJT9 491 aa8.62□□□□□ -1.03
RNF40-204ENST00000563683 TNCP24821 2201 aa8.62□□□□□ -1.03
RNF40-204ENST00000563683 TRAV34A0A0B4J273 112 aa8.61□□□□□ -1.03
RNF40-204ENST00000563683 IGHV1-46P01743 117 aa8.61□□□□□ -1.03
RNF40-204ENST00000563683 IGHG3P01860 377 aa8.61□□□□□ -1.03
RNF40-204ENST00000563683 VWC2Q2TAL6 325 aa8.61□□□□□ -1.03
RNF40-204ENST00000563683 Q56UQ5 140 aa8.61□□□□□ -1.03
RNF40-204ENST00000563683 OR10J3Q5JRS4 329 aa8.61□□□□□ -1.03
RNF40-204ENST00000563683 SSBP3Q9BWW4 388 aaPredicted RBP8.61□□□□□ -1.03
RNF40-204ENST00000563683 TBL2Q9Y4P3 447 aaKnown RBP8.61□□□□□ -1.03
RNF40-204ENST00000563683 CEP192Q8TEP8 1941 aa8.61□□□□□ -1.03
RNF40-204ENST00000563683 FAM87AP0C7U9 286 aa8.61□□□□□ -1.03
RNF40-204ENST00000563683 C8orf88P0DMB2 117 aa8.61□□□□□ -1.03
RNF40-204ENST00000563683 IGLC2P0DOY2 106 aa8.61□□□□□ -1.03
RNF40-204ENST00000563683 IGLC3P0DOY3 106 aa8.61□□□□□ -1.03
RNF40-204ENST00000563683 IBA57Q5T440 356 aaKnown RBP8.61□□□□□ -1.03
RNF40-204ENST00000563683 ZNF474Q6S9Z5 364 aaPredicted RBP8.61□□□□□ -1.03
RNF40-204ENST00000563683 TREML4Q6UXN2 200 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms