RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 PKIGQ9Y2B9 76 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 TIMM9Q9Y5J7 89 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 RTEL1-TNFRSF6BF6WH68 1400 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 FMN1Q68DA7 1419 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 TOPBP1Q92547 1522 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 DOCK5Q9H7D0 1870 aa0.78□□□□□ -2.29
HMGB1P33-201ENST00000563485 TRBV19A0A075B6N1 114 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 TMSB15BA0A087X1C1 80 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 IGKV1D-43A0A0B4J1Z2 117 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 TRAV4A0A0B4J268 109 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 FAM236DA0A1B0GTK5 79 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 VPS37CA5D8V6 355 aaPredicted RBP0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 ARRDC5A6NEK1 342 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 ZNF860A6NHJ4 632 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 E5RI56 91 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 SLC22A1O15245 554 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 TCL1BO95988 128 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 BPGMP07738 259 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 TFPTP0C1Z6 253 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 METTL15P1P0C7V9 234 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 FAM236CP0DP71 79 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 HLA-DMBP28068 263 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 PEBP1P30086 187 aaKnown RBP0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 NDUFA5Q16718 116 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 AADACL3Q5VUY0 350 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 ZNF705AQ6ZN79 300 aaPredicted RBP0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 CDC26Q8NHZ8 85 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 AP3S1Q92572 193 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 KLK6Q92876 244 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 SCGB3A1Q96QR1 104 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 TXNDC17Q9BRA2 123 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 CCDC90BQ9GZT6 254 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 SH3BGRL3Q9H299 93 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 TMEM133Q9H2Q1 129 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 PYCARDQ9ULZ3 195 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 CYSLTR1Q9Y271 337 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 TIMM22Q9Y584 194 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 WDR90Q96KV7 1748 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 KIF13BQ9NQT8 1826 aa0.77□□□□□ -2.29
HMGB1P33-201ENST00000563485 HEATR5AQ86XA9 2040 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 CCDC88CQ9P219 2028 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 STRCP1A6NGW2 1772 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 MAST2Q6P0Q8 1798 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 HECW2Q9P2P5 1572 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 RIC1Q4ADV7 1423 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 hCG_1818297A0A087WSY0 165 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 A0A0D9SEW6 157 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 A0A0D9SG52 128 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 A0A0G2JQZ4 141 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 MEIS3P1A6NDR6 274 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 SIGLEC16A6NMB1 481 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 A8MT66 165 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 TMEM238C9JI98 176 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 H3BRN7 92 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 BUB1B-PAK6H3BSN5 160 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 H3BT86 120 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 CIAO1O76071 339 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 CRYZL1O95825 349 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 C1QCP02747 245 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 CLPSP04118 112 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 NEFHP12036 1026 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 SERPINB9P50453 376 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 CDC42P60953 191 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 YPEL3P61236 119 aaPredicted RBP0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 ERHP84090 104 aaKnown RBP0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 GOLT1AQ6ZVE7 132 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 MIR17HGQ75NE6 70 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 DHFR2Q86XF0 187 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 TMEM86AQ8N2M4 240 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 PACRGLQ8N7B6 248 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 DCANP1Q8TF63 244 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 HSPB9Q9BQS6 159 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 IMUPQ9GZP8 106 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 RNASE7Q9H1E1 156 aaKnown RBP0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 C11orf68Q9H3H3 251 aaKnown RBP0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 CENPHQ9H3R5 247 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 C8orf4Q9NR00 106 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 UQCC1Q9NVA1 299 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 TP73-AS1Q9UF72 201 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 LHFPL6Q9Y693 200 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 ZFHX2Q9C0A1 2572 aaPredicted RBP0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 BRWD1Q9NSI6 2320 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 DOCK10Q96BY6 2186 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 PTPRBP23467 1997 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 MYH11P35749 1972 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 GREB1Q4ZG55 1949 aa0.76□□□□□ -2.29
HMGB1P33-201ENST00000563485 LAMB2P55268 1798 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 ZCCHC11Q5TAX3 1644 aaKnown RBP0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 TONSLQ96HA7 1378 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 TRAPPC13A5PLN9 417 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 TMEM212A6NML5 194 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 FNDC10F2Z333 226 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 AIPO00170 330 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 OR5F1O95221 314 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 IFNA1P01562 189 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 RPSAP08865 295 aaKnown RBP0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 HTR1AP08908 422 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 SPI1P17947 270 aa0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 RPS4Y1P22090 263 aaKnown RBP0.75□□□□□ -2.29
HMGB1P33-201ENST00000563485 CASP1P29466 404 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms