RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 DNAJC9-AS1A6NH13 148 aa7.99□□□□□ -1.13
SMG1-208ENST00000563448 G3V318 75 aa7.99□□□□□ -1.13
SMG1-208ENST00000563448 DFFBO76075 338 aa7.99□□□□□ -1.13
SMG1-208ENST00000563448 JTBO76095 146 aa7.99□□□□□ -1.13
SMG1-208ENST00000563448 CRIP2P52943 208 aaPredicted RBP7.99□□□□□ -1.13
SMG1-208ENST00000563448 UBA52P62987 128 aaKnown RBP7.99□□□□□ -1.13
SMG1-208ENST00000563448 DLK1P80370 383 aa7.99□□□□□ -1.13
SMG1-208ENST00000563448 ATP6V1FQ16864 119 aa7.99□□□□□ -1.13
SMG1-208ENST00000563448 VWC2Q2TAL6 325 aa7.99□□□□□ -1.13
SMG1-208ENST00000563448 C19orf54Q5BKX5 351 aa7.99□□□□□ -1.13
SMG1-208ENST00000563448 UNQ5815/PRO19632Q6UWF5 114 aa7.99□□□□□ -1.13
SMG1-208ENST00000563448 RBMS3Q6XE24 437 aaKnown RBP7.99□□□□□ -1.13
SMG1-208ENST00000563448 ZNF767PQ75MW2 155 aa7.99□□□□□ -1.13
SMG1-208ENST00000563448 SLC35E3Q7Z769 313 aa7.99□□□□□ -1.13
SMG1-208ENST00000563448 UBAC2Q8NBM4 344 aa7.99□□□□□ -1.13
SMG1-208ENST00000563448 OR5T1Q8NG75 326 aa7.99□□□□□ -1.13
SMG1-208ENST00000563448 ESM1Q9NQ30 184 aa7.99□□□□□ -1.13
SMG1-208ENST00000563448 HIVEP1P15822 2718 aa7.99□□□□□ -1.13
SMG1-208ENST00000563448 HIVEP2P31629 2446 aa7.98□□□□□ -1.13
SMG1-208ENST00000563448 BORCS7-ASMTA0A0B4J1R7 106 aa7.98□□□□□ -1.13
SMG1-208ENST00000563448 PRH1P02810 166 aa7.98□□□□□ -1.13
SMG1-208ENST00000563448 TPT1P13693 172 aaKnown RBP7.98□□□□□ -1.13
SMG1-208ENST00000563448 CD69Q07108 199 aa7.98□□□□□ -1.13
SMG1-208ENST00000563448 SCGB2A2Q13296 93 aa7.98□□□□□ -1.13
SMG1-208ENST00000563448 AKIRIN2Q53H80 203 aa7.98□□□□□ -1.13
SMG1-208ENST00000563448 ARSJQ5FYB0 599 aaPredicted RBP7.98□□□□□ -1.13
SMG1-208ENST00000563448 SLC25A24Q6NUK1 477 aa7.98□□□□□ -1.13
SMG1-208ENST00000563448 TEX261Q6UWH6 196 aa7.98□□□□□ -1.13
SMG1-208ENST00000563448 BAP18Q8IXM2 172 aa7.98□□□□□ -1.13
SMG1-208ENST00000563448 FAM110DQ8TAY7 271 aaPredicted RBP7.98□□□□□ -1.13
SMG1-208ENST00000563448 RNASEH2CQ8TDP1 164 aaKnown RBP7.98□□□□□ -1.13
SMG1-208ENST00000563448 TMEM147Q9BVK8 224 aa7.98□□□□□ -1.13
SMG1-208ENST00000563448 GGACTQ9BVM4 153 aa7.98□□□□□ -1.13
SMG1-208ENST00000563448 ARV1Q9H2C2 271 aa7.98□□□□□ -1.13
SMG1-208ENST00000563448 FNDC4Q9H6D8 234 aaPredicted RBP7.98□□□□□ -1.13
SMG1-208ENST00000563448 LINC00527Q9UJ94 153 aa7.98□□□□□ -1.13
SMG1-208ENST00000563448 IGF1P05019 195 aa7.98□□□□□ -1.13
SMG1-208ENST00000563448 MDKP21741 143 aaPredicted RBP7.98□□□□□ -1.13
SMG1-208ENST00000563448 ZNF266Q14584 549 aa7.98□□□□□ -1.13
SMG1-208ENST00000563448 MISP3Q96FF7 219 aa7.98□□□□□ -1.13
SMG1-208ENST00000563448 TMEM68Q96MH6 324 aa7.98□□□□□ -1.13
SMG1-208ENST00000563448 FANCD2OSQ96PS1 177 aa7.98□□□□□ -1.13
SMG1-208ENST00000563448 GINS3Q9BRX5 216 aa7.98□□□□□ -1.13
SMG1-208ENST00000563448 RFNGQ9Y644 331 aa7.98□□□□□ -1.13
SMG1-208ENST00000563448 IGLV11-55A0A075B6I3 123 aa7.97□□□□□ -1.13
SMG1-208ENST00000563448 TRAV41A0A0B4J266 112 aa7.97□□□□□ -1.13
SMG1-208ENST00000563448 UBE2L5PA0A1B0GUS4 154 aa7.97□□□□□ -1.13
SMG1-208ENST00000563448 DEFA4P12838 97 aa7.97□□□□□ -1.13
SMG1-208ENST00000563448 GPX4P36969 197 aaPredicted RBP7.97□□□□□ -1.13
SMG1-208ENST00000563448 EXOSC2Q13868 293 aaKnown RBP7.97□□□□□ -1.13
SMG1-208ENST00000563448 TREML4Q6UXN2 200 aa7.97□□□□□ -1.13
SMG1-208ENST00000563448 HSD17B11Q8NBQ5 300 aa7.97□□□□□ -1.13
SMG1-208ENST00000563448 OR1L6Q8NGR2 347 aa7.97□□□□□ -1.13
SMG1-208ENST00000563448 NOL4LQ96MY1 436 aaPredicted RBP7.97□□□□□ -1.13
SMG1-208ENST00000563448 PARD6GQ9BYG4 376 aaPredicted RBP7.97□□□□□ -1.13
SMG1-208ENST00000563448 WDR61Q9GZS3 305 aaKnown RBP7.97□□□□□ -1.13
SMG1-208ENST00000563448 ZNF702PQ9H963 129 aa7.97□□□□□ -1.13
SMG1-208ENST00000563448 UQCC1Q9NVA1 299 aa7.97□□□□□ -1.13
SMG1-208ENST00000563448 CUBNO60494 3623 aa7.97□□□□□ -1.13
SMG1-208ENST00000563448 IGHV3-21A0A0B4J1V1 117 aa7.96□□□□□ -1.13
SMG1-208ENST00000563448 CORTO00230 105 aa7.96□□□□□ -1.13
SMG1-208ENST00000563448 SOX15O60248 233 aa7.96□□□□□ -1.13
SMG1-208ENST00000563448 MT-CO2P00403 227 aa7.96□□□□□ -1.13
SMG1-208ENST00000563448 IFNA5P01569 189 aa7.96□□□□□ -1.13
SMG1-208ENST00000563448 OPRK1P41145 380 aa7.96□□□□□ -1.13
SMG1-208ENST00000563448 EIF5AP63241 154 aaKnown RBP7.96□□□□□ -1.13
SMG1-208ENST00000563448 RUNX1Q01196 453 aa7.96□□□□□ -1.13
SMG1-208ENST00000563448 GAMTQ14353 236 aa7.96□□□□□ -1.13
SMG1-208ENST00000563448 KLK9Q2XQG4 91 aa7.96□□□□□ -1.13
SMG1-208ENST00000563448 TMEM95Q3KNT9 176 aa7.96□□□□□ -1.13
SMG1-208ENST00000563448 SLC16A13Q7RTY0 426 aa7.96□□□□□ -1.13
SMG1-208ENST00000563448 CCDC28AQ8IWP9 274 aa7.96□□□□□ -1.13
SMG1-208ENST00000563448 ZNF680Q8NEM1 530 aa7.96□□□□□ -1.13
SMG1-208ENST00000563448 OR2T6Q8NHC8 308 aa7.96□□□□□ -1.13
SMG1-208ENST00000563448 PRSS22Q9GZN4 317 aa7.96□□□□□ -1.13
SMG1-208ENST00000563448 NPFFR1Q9GZQ6 430 aa7.96□□□□□ -1.13
SMG1-208ENST00000563448 NPVFQ9HCQ7 196 aa7.96□□□□□ -1.13
SMG1-208ENST00000563448 MRPL36Q9P0J6 103 aaKnown RBP7.96□□□□□ -1.13
SMG1-208ENST00000563448 KLK9Q9UKQ9 250 aa7.96□□□□□ -1.13
SMG1-208ENST00000563448 SMCO3A2RU48 225 aa7.96□□□□□ -1.14
SMG1-208ENST00000563448 FNDC10F2Z333 226 aa7.96□□□□□ -1.14
SMG1-208ENST00000563448 CLDN34H7C241 214 aa7.96□□□□□ -1.14
SMG1-208ENST00000563448 TRIM77I1YAP6 450 aa7.96□□□□□ -1.14
SMG1-208ENST00000563448 I3L2K1 104 aa7.96□□□□□ -1.14
SMG1-208ENST00000563448 AP4M1O00189 453 aa7.96□□□□□ -1.14
SMG1-208ENST00000563448 IGHV3-48P01763 117 aa7.96□□□□□ -1.14
SMG1-208ENST00000563448 ATP6V0CP27449 155 aa7.96□□□□□ -1.14
SMG1-208ENST00000563448 PPIFP30405 207 aaKnown RBP7.96□□□□□ -1.14
SMG1-208ENST00000563448 ALKAL2Q6UX46 152 aa7.96□□□□□ -1.14
SMG1-208ENST00000563448 CACNG8Q8WXS5 425 aa7.96□□□□□ -1.14
SMG1-208ENST00000563448 TAF15Q92804 592 aaKnown RBP eCLIP7.96□□□□□ -1.14
SMG1-208ENST00000563448 SH3BGRL3Q9H299 93 aa7.96□□□□□ -1.14
SMG1-208ENST00000563448 PLA2G2EQ9NZK7 142 aa7.96□□□□□ -1.14
SMG1-208ENST00000563448 WDR83OSQ9Y284 106 aa7.96□□□□□ -1.14
SMG1-208ENST00000563448 K7EIM0 57 aa7.95□□□□□ -1.14
SMG1-208ENST00000563448 SPP1P10451 314 aa7.95□□□□□ -1.14
SMG1-208ENST00000563448 FGF7P21781 194 aa7.95□□□□□ -1.14
SMG1-208ENST00000563448 HILS1P60008 231 aa7.95□□□□□ -1.14
SMG1-208ENST00000563448 DEFA5Q01523 94 aa7.95□□□□□ -1.14
SMG1-208ENST00000563448 LURAP1LQ8IV03 231 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms