RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 NCS1P62166 190 aa15.4■□□□□ 0.06
CHD9-208ENST00000563410 IZUMO4Q1ZYL8 232 aa15.4■□□□□ 0.06
CHD9-208ENST00000563410 C6orf62Q9GZU0 229 aaPredicted RBP15.4■□□□□ 0.06
CHD9-208ENST00000563410 CSTL1Q9H114 145 aa15.4■□□□□ 0.06
CHD9-208ENST00000563410 KLK5Q9Y337 293 aaPredicted RBP15.4■□□□□ 0.06
CHD9-208ENST00000563410 DNAH10Q8IVF4 4471 aa15.4■□□□□ 0.06
CHD9-208ENST00000563410 GNG7O60262 68 aa15.39■□□□□ 0.05
CHD9-208ENST00000563410 ELK1P19419 428 aa15.39■□□□□ 0.05
CHD9-208ENST00000563410 CMC4P56277 68 aaPredicted RBP15.39■□□□□ 0.05
CHD9-208ENST00000563410 SPINK9Q5DT21 86 aa15.39■□□□□ 0.05
CHD9-208ENST00000563410 GBGT1Q8N5D6 347 aa15.39■□□□□ 0.05
CHD9-208ENST00000563410 TMEM217Q8N7C4 229 aa15.39■□□□□ 0.05
CHD9-208ENST00000563410 PINX1Q96BK5 328 aaKnown RBP15.39■□□□□ 0.05
CHD9-208ENST00000563410 SMIM31A0A1B0GVY4 71 aa15.38■□□□□ 0.05
CHD9-208ENST00000563410 M0QYG6 137 aa15.38■□□□□ 0.05
CHD9-208ENST00000563410 ERHP84090 104 aaKnown RBP15.38■□□□□ 0.05
CHD9-208ENST00000563410 TOMM20LQ6UXN7 152 aa15.38■□□□□ 0.05
CHD9-208ENST00000563410 LILRB2Q8N423 598 aa15.38■□□□□ 0.05
CHD9-208ENST00000563410 PHLDA1Q8WV24 401 aaPredicted RBP15.38■□□□□ 0.05
CHD9-208ENST00000563410 VCX3AQ9NNX9 186 aa15.38■□□□□ 0.05
CHD9-208ENST00000563410 MPTX1A8MV57 137 aa15.37■□□□□ 0.05
CHD9-208ENST00000563410 HPGDSO60760 199 aa15.37■□□□□ 0.05
CHD9-208ENST00000563410 IGKV1-5P01602 117 aa15.37■□□□□ 0.05
CHD9-208ENST00000563410 APOHP02749 345 aaPredicted RBP15.37■□□□□ 0.05
CHD9-208ENST00000563410 P0C879 139 aa15.37■□□□□ 0.05
CHD9-208ENST00000563410 RND3P61587 244 aa15.37■□□□□ 0.05
CHD9-208ENST00000563410 VBP1P61758 197 aa15.37■□□□□ 0.05
CHD9-208ENST00000563410 TCF24Q7RTU0 167 aa15.37■□□□□ 0.05
CHD9-208ENST00000563410 GATAD1Q8WUU5 269 aa15.37■□□□□ 0.05
CHD9-208ENST00000563410 ST8SIA2Q92186 375 aa15.37■□□□□ 0.05
CHD9-208ENST00000563410 RARRES2Q99969 163 aa15.37■□□□□ 0.05
CHD9-208ENST00000563410 FUNDC2Q9BWH2 189 aa15.37■□□□□ 0.05
CHD9-208ENST00000563410 VSIRQ9H7M9 311 aa15.37■□□□□ 0.05
CHD9-208ENST00000563410 ZFAND3Q9H8U3 227 aa15.37■□□□□ 0.05
CHD9-208ENST00000563410 A0A0B4J293 547 aa15.36■□□□□ 0.05
CHD9-208ENST00000563410 PVRIGQ6DKI7 326 aa15.36■□□□□ 0.05
CHD9-208ENST00000563410 LHFPL1Q86WI0 220 aa15.36■□□□□ 0.05
CHD9-208ENST00000563410 RPP25LQ8N5L8 163 aaKnown RBP15.36■□□□□ 0.05
CHD9-208ENST00000563410 INS-IGF2F8WCM5 200 aa15.35■□□□□ 0.05
CHD9-208ENST00000563410 TNFAIP8O95379 198 aa15.35■□□□□ 0.05
CHD9-208ENST00000563410 PI3P19957 117 aa15.35■□□□□ 0.05
CHD9-208ENST00000563410 NPBWR1P48145 328 aa15.35■□□□□ 0.05
CHD9-208ENST00000563410 ZNF486Q96H40 463 aaPredicted RBP15.35■□□□□ 0.05
CHD9-208ENST00000563410 TP53RKQ96S44 253 aa15.35■□□□□ 0.05
CHD9-208ENST00000563410 GINS3Q9BRX5 216 aa15.35■□□□□ 0.05
CHD9-208ENST00000563410 KLK11Q9UBX7 282 aa15.35■□□□□ 0.05
CHD9-208ENST00000563410 PUS1Q9Y606 427 aaKnown RBP eCLIP15.35■□□□□ 0.05
CHD9-208ENST00000563410 VPS13DQ5THJ4 4388 aa15.34■□□□□ 0.05
CHD9-208ENST00000563410 ST8SIA3O43173 380 aa15.34■□□□□ 0.05
CHD9-208ENST00000563410 TMEM50AO95807 157 aa15.34■□□□□ 0.05
CHD9-208ENST00000563410 CD5P06127 495 aa15.34■□□□□ 0.05
CHD9-208ENST00000563410 PAFAH1B2P68402 229 aa15.34■□□□□ 0.05
CHD9-208ENST00000563410 ZNF600Q6ZNG1 722 aa15.34■□□□□ 0.05
CHD9-208ENST00000563410 DUSP18Q8NEJ0 188 aa15.34■□□□□ 0.05
CHD9-208ENST00000563410 MS4A6AQ9H2W1 248 aa15.34■□□□□ 0.05
CHD9-208ENST00000563410 C11orf68Q9H3H3 251 aaKnown RBP15.34■□□□□ 0.05
CHD9-208ENST00000563410 DNAH6Q9C0G6 4158 aa15.33■□□□□ 0.04
CHD9-208ENST00000563410 IGHV3-66A0A0C4DH42 116 aa15.33■□□□□ 0.04
CHD9-208ENST00000563410 A0A1B0GU03 582 aa15.33■□□□□ 0.04
CHD9-208ENST00000563410 DFFBO76075 338 aa15.33■□□□□ 0.04
CHD9-208ENST00000563410 PGAM2P15259 253 aa15.33■□□□□ 0.04
CHD9-208ENST00000563410 PIGPP57054 158 aa15.33■□□□□ 0.04
CHD9-208ENST00000563410 NANOS2P60321 138 aaKnown RBP15.33■□□□□ 0.04
CHD9-208ENST00000563410 RNASE12Q5GAN4 147 aaKnown RBP15.33■□□□□ 0.04
CHD9-208ENST00000563410 FAM24BQ8N5W8 94 aa15.33■□□□□ 0.04
CHD9-208ENST00000563410 OR11H2Q8NH07 326 aa15.33■□□□□ 0.04
CHD9-208ENST00000563410 DEDDO75618 318 aa15.32■□□□□ 0.04
CHD9-208ENST00000563410 CA1P00915 261 aaPredicted RBP15.32■□□□□ 0.04
CHD9-208ENST00000563410 CD3DP04234 171 aa15.32■□□□□ 0.04
CHD9-208ENST00000563410 RNASE2P10153 161 aaKnown RBP15.32■□□□□ 0.04
CHD9-208ENST00000563410 SNCAP37840 140 aa15.32■□□□□ 0.04
CHD9-208ENST00000563410 LEMD1Q68G75 181 aa15.32■□□□□ 0.04
CHD9-208ENST00000563410 LGALS9CQ6DKI2 356 aa15.32■□□□□ 0.04
CHD9-208ENST00000563410 SLC35G3Q8N808 338 aa15.32■□□□□ 0.04
CHD9-208ENST00000563410 MRPL36Q9P0J6 103 aaKnown RBP15.32■□□□□ 0.04
CHD9-208ENST00000563410 TRAV2A0A0B4J234 112 aa15.31■□□□□ 0.04
CHD9-208ENST00000563410 C3orf85A0A1B0GTC6 90 aa15.31■□□□□ 0.04
CHD9-208ENST00000563410 DNASE2O00115 360 aaPredicted RBP15.31■□□□□ 0.04
CHD9-208ENST00000563410 RORCP51449 518 aa15.31■□□□□ 0.04
CHD9-208ENST00000563410 AKR1C2P52895 323 aa15.31■□□□□ 0.04
CHD9-208ENST00000563410 DEFB131AP59861 70 aa15.31■□□□□ 0.04
CHD9-208ENST00000563410 RNASE10Q5GAN6 216 aaKnown RBP15.31■□□□□ 0.04
CHD9-208ENST00000563410 ARRDC1Q8N5I2 433 aa15.31■□□□□ 0.04
CHD9-208ENST00000563410 OR52I2Q8NH67 350 aa15.31■□□□□ 0.04
CHD9-208ENST00000563410 C11orf45Q8TAV5 145 aa15.31■□□□□ 0.04
CHD9-208ENST00000563410 FNDC4Q9H6D8 234 aaPredicted RBP15.31■□□□□ 0.04
CHD9-208ENST00000563410 A0A0G2JRQ6 117 aa15.3■□□□□ 0.04
CHD9-208ENST00000563410 FAM25AB3EWG3 89 aa15.3■□□□□ 0.04
CHD9-208ENST00000563410 FAM25CB3EWG5 89 aa15.3■□□□□ 0.04
CHD9-208ENST00000563410 FAM25GB3EWG6 89 aa15.3■□□□□ 0.04
CHD9-208ENST00000563410 IFNA17P01571 189 aa15.3■□□□□ 0.04
CHD9-208ENST00000563410 ETV6P41212 452 aa15.3■□□□□ 0.04
CHD9-208ENST00000563410 MLANAQ16655 118 aa15.3■□□□□ 0.04
CHD9-208ENST00000563410 PPP5CP53041 499 aa15.29■□□□□ 0.04
CHD9-208ENST00000563410 RBMS2Q15434 407 aaKnown RBP15.29■□□□□ 0.04
CHD9-208ENST00000563410 SP6Q3SY56 376 aa15.29■□□□□ 0.04
CHD9-208ENST00000563410 OR4D10Q8NGI6 311 aa15.29■□□□□ 0.04
CHD9-208ENST00000563410 MFFQ9GZY8 342 aa15.29■□□□□ 0.04
CHD9-208ENST00000563410 MTFP1Q9UDX5 166 aa15.29■□□□□ 0.04
CHD9-208ENST00000563410 FBXL17Q9UF56 701 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 215.2 ms