RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 APRG1Q8IVJ8 170 aa12.38□□□□□ -0.43
HDGFL3-203ENST00000563404 OR5B3Q8NH48 314 aa12.38□□□□□ -0.43
HDGFL3-203ENST00000563404 LSM10Q969L4 123 aaKnown RBP12.38□□□□□ -0.43
HDGFL3-203ENST00000563404 HINT2Q9BX68 163 aa12.38□□□□□ -0.43
HDGFL3-203ENST00000563404 OR51B2Q9Y5P1 312 aa12.38□□□□□ -0.43
HDGFL3-203ENST00000563404 OR4C46A6NHA9 309 aa12.37□□□□□ -0.43
HDGFL3-203ENST00000563404 DBX1A6NMT0 343 aa12.37□□□□□ -0.43
HDGFL3-203ENST00000563404 CYB5BO43169 146 aa12.37□□□□□ -0.43
HDGFL3-203ENST00000563404 DEDDO75618 318 aa12.37□□□□□ -0.43
HDGFL3-203ENST00000563404 KRASP01116 189 aa12.37□□□□□ -0.43
HDGFL3-203ENST00000563404 CTSGP08311 255 aa12.37□□□□□ -0.43
HDGFL3-203ENST00000563404 F2RP25116 425 aa12.37□□□□□ -0.43
HDGFL3-203ENST00000563404 G6PCP35575 357 aa12.37□□□□□ -0.43
HDGFL3-203ENST00000563404 LPAR6P43657 344 aa12.37□□□□□ -0.43
HDGFL3-203ENST00000563404 TAS2R46P59540 309 aa12.37□□□□□ -0.43
HDGFL3-203ENST00000563404 HERV-K104P61576 105 aa12.37□□□□□ -0.43
HDGFL3-203ENST00000563404 ZNF79Q15937 498 aa12.37□□□□□ -0.43
HDGFL3-203ENST00000563404 UBAC2Q8NBM4 344 aa12.37□□□□□ -0.43
HDGFL3-203ENST00000563404 MOB3AQ96BX8 217 aa12.37□□□□□ -0.43
HDGFL3-203ENST00000563404 GALNT14Q96FL9 552 aa12.37□□□□□ -0.43
HDGFL3-203ENST00000563404 ATP6V0BQ99437 205 aa12.37□□□□□ -0.43
HDGFL3-203ENST00000563404 RNF2Q99496 336 aa12.37□□□□□ -0.43
HDGFL3-203ENST00000563404 ZNF2Q9BSG1 426 aaPredicted RBP12.37□□□□□ -0.43
HDGFL3-203ENST00000563404 EHFQ9NZC4 300 aa12.37□□□□□ -0.43
HDGFL3-203ENST00000563404 KLK11Q9UBX7 282 aa12.37□□□□□ -0.43
HDGFL3-203ENST00000563404 SMPXQ9UHP9 88 aa12.37□□□□□ -0.43
HDGFL3-203ENST00000563404 C15orf62A8K5M9 175 aa12.36□□□□□ -0.43
HDGFL3-203ENST00000563404 ERVK-16P61578 105 aa12.36□□□□□ -0.43
HDGFL3-203ENST00000563404 PYDC2Q56P42 97 aa12.36□□□□□ -0.43
HDGFL3-203ENST00000563404 Q56UQ5 140 aa12.36□□□□□ -0.43
HDGFL3-203ENST00000563404 TMEM229BQ8NBD8 167 aa12.36□□□□□ -0.43
HDGFL3-203ENST00000563404 PHLDA1Q8WV24 401 aaPredicted RBP12.36□□□□□ -0.43
HDGFL3-203ENST00000563404 SRRQ9GZT4 340 aa12.36□□□□□ -0.43
HDGFL3-203ENST00000563404 FXYD6Q9H0Q3 95 aa12.36□□□□□ -0.43
HDGFL3-203ENST00000563404 KLK5Q9Y337 293 aaPredicted RBP12.36□□□□□ -0.43
HDGFL3-203ENST00000563404 IGHV3-49A0A0A0MS15 119 aa12.35□□□□□ -0.43
HDGFL3-203ENST00000563404 CHEK1O14757 476 aa12.35□□□□□ -0.43
HDGFL3-203ENST00000563404 PMP2P02689 132 aa12.35□□□□□ -0.43
HDGFL3-203ENST00000563404 PPP5CP53041 499 aa12.35□□□□□ -0.43
HDGFL3-203ENST00000563404 CADM3Q8N126 398 aa12.35□□□□□ -0.43
HDGFL3-203ENST00000563404 WDR12Q9GZL7 423 aaKnown RBP12.35□□□□□ -0.43
HDGFL3-203ENST00000563404 IGHV7-4-1A0A0J9YVY3 117 aa12.34□□□□□ -0.43
HDGFL3-203ENST00000563404 CD74P04233 296 aa12.34□□□□□ -0.43
HDGFL3-203ENST00000563404 TFPI2P48307 235 aa12.34□□□□□ -0.43
HDGFL3-203ENST00000563404 TAS2R19P59542 299 aa12.34□□□□□ -0.43
HDGFL3-203ENST00000563404 AP3S2P59780 193 aa12.34□□□□□ -0.43
HDGFL3-203ENST00000563404 CCDC32Q9BV29 185 aa12.34□□□□□ -0.43
HDGFL3-203ENST00000563404 RHPN1-AS1Q9BWJ2 59 aa12.34□□□□□ -0.43
HDGFL3-203ENST00000563404 TMEM14BQ9NUH8 114 aa12.34□□□□□ -0.43
HDGFL3-203ENST00000563404 ANKRD20A5PA0PJZ0 165 aa12.33□□□□□ -0.44
HDGFL3-203ENST00000563404 I3L2K1 104 aa12.33□□□□□ -0.44
HDGFL3-203ENST00000563404 ZNF846Q147U1 533 aa12.33□□□□□ -0.44
HDGFL3-203ENST00000563404 FAM90A2PQ658T7 463 aa12.33□□□□□ -0.44
HDGFL3-203ENST00000563404 TMEM217Q8N7C4 229 aa12.33□□□□□ -0.44
HDGFL3-203ENST00000563404 TMEM116Q8NCL8 245 aa12.33□□□□□ -0.44
HDGFL3-203ENST00000563404 OR5H2Q8NGV7 314 aa12.33□□□□□ -0.44
HDGFL3-203ENST00000563404 OR1P1Q8NH06 330 aa12.33□□□□□ -0.44
HDGFL3-203ENST00000563404 BORCS5Q969J3 196 aa12.33□□□□□ -0.44
HDGFL3-203ENST00000563404 OR10C1Q96KK4 312 aa12.33□□□□□ -0.44
HDGFL3-203ENST00000563404 CSTL1Q9H114 145 aa12.33□□□□□ -0.44
HDGFL3-203ENST00000563404 PRNDQ9UKY0 176 aa12.33□□□□□ -0.44
HDGFL3-203ENST00000563404 IGKV3-7A0A075B6H7 116 aa12.32□□□□□ -0.44
HDGFL3-203ENST00000563404 IGHV3OR16-13A0A075B7E8 117 aa12.32□□□□□ -0.44
HDGFL3-203ENST00000563404 IGHV3-74A0A0B4J1X5 117 aa12.32□□□□□ -0.44
HDGFL3-203ENST00000563404 C15orf61A6NNL5 157 aa12.32□□□□□ -0.44
HDGFL3-203ENST00000563404 SNAPC5O75971 98 aa12.32□□□□□ -0.44
HDGFL3-203ENST00000563404 IGHV3-48P01763 117 aa12.32□□□□□ -0.44
HDGFL3-203ENST00000563404 HLA-DMAP28067 261 aa12.32□□□□□ -0.44
HDGFL3-203ENST00000563404 NANOS2P60321 138 aaKnown RBP12.32□□□□□ -0.44
HDGFL3-203ENST00000563404 MEF2DQ14814 521 aa12.32□□□□□ -0.44
HDGFL3-203ENST00000563404 LGALS9CQ6DKI2 356 aa12.32□□□□□ -0.44
HDGFL3-203ENST00000563404 STEAP1BQ6NZ63 245 aa12.32□□□□□ -0.44
HDGFL3-203ENST00000563404 ARRDC1Q8N5I2 433 aa12.32□□□□□ -0.44
HDGFL3-203ENST00000563404 OR6F1Q8NGZ6 308 aa12.32□□□□□ -0.44
HDGFL3-203ENST00000563404 TRIM63Q969Q1 353 aa12.32□□□□□ -0.44
HDGFL3-203ENST00000563404 TMEM56Q96MV1 263 aa12.32□□□□□ -0.44
HDGFL3-203ENST00000563404 SDHCQ99643 169 aaPredicted RBP12.32□□□□□ -0.44
HDGFL3-203ENST00000563404 MPTX1A8MV57 137 aa12.31□□□□□ -0.44
HDGFL3-203ENST00000563404 GPR31O00270 319 aa12.31□□□□□ -0.44
HDGFL3-203ENST00000563404 IGKV1-39P01597 117 aa12.31□□□□□ -0.44
HDGFL3-203ENST00000563404 CD3DP04234 171 aa12.31□□□□□ -0.44
HDGFL3-203ENST00000563404 IGKV1D-39P04432 117 aa12.31□□□□□ -0.44
HDGFL3-203ENST00000563404 AKAIN1P0CW23 69 aa12.31□□□□□ -0.44
HDGFL3-203ENST00000563404 HRH1P35367 487 aa12.31□□□□□ -0.44
HDGFL3-203ENST00000563404 RELQ04864 619 aaPredicted RBP12.31□□□□□ -0.44
HDGFL3-203ENST00000563404 PHLDA2Q53GA4 152 aa12.31□□□□□ -0.44
HDGFL3-203ENST00000563404 RNASE10Q5GAN6 216 aaKnown RBP12.31□□□□□ -0.44
HDGFL3-203ENST00000563404 GBGT1Q8N5D6 347 aa12.31□□□□□ -0.44
HDGFL3-203ENST00000563404 MISP3Q96FF7 219 aa12.31□□□□□ -0.44
HDGFL3-203ENST00000563404 RARRES2Q99969 163 aa12.31□□□□□ -0.44
HDGFL3-203ENST00000563404 NUPL2O15504 423 aaKnown RBP12.3□□□□□ -0.44
HDGFL3-203ENST00000563404 YIF1AO95070 293 aa12.3□□□□□ -0.44
HDGFL3-203ENST00000563404 MFAP4P55083 255 aa12.3□□□□□ -0.44
HDGFL3-203ENST00000563404 KLF9Q13886 244 aaPredicted RBP12.3□□□□□ -0.44
HDGFL3-203ENST00000563404 BAK1Q16611 211 aa12.3□□□□□ -0.44
HDGFL3-203ENST00000563404 CMTM1Q8IZ96 169 aa12.3□□□□□ -0.44
HDGFL3-203ENST00000563404 LILRB2Q8N423 598 aa12.3□□□□□ -0.44
HDGFL3-203ENST00000563404 TOMM5Q8N4H5 51 aa12.3□□□□□ -0.44
HDGFL3-203ENST00000563404 GATAD1Q8WUU5 269 aa12.3□□□□□ -0.44
HDGFL3-203ENST00000563404 SEC22AQ96IW7 307 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms