RNA–Protein interactions for RNA: ENST00000563396.1

SMPD3-204, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-204ENST00000563396 IZUMO4Q1ZYL8 232 aa10.53□□□□□ -0.72
SMPD3-204ENST00000563396 CASC10Q5T4H9 136 aa10.53□□□□□ -0.72
SMPD3-204ENST00000563396 DEFB125Q8N687 156 aa10.53□□□□□ -0.72
SMPD3-204ENST00000563396 OR10C1Q96KK4 312 aa10.53□□□□□ -0.72
SMPD3-204ENST00000563396 SPAG8Q99932 426 aaPredicted RBP10.53□□□□□ -0.72
SMPD3-204ENST00000563396 SOSTQ9BQB4 213 aa10.53□□□□□ -0.72
SMPD3-204ENST00000563396 TMEM222Q9H0R3 208 aa10.53□□□□□ -0.72
SMPD3-204ENST00000563396 HIPK2Q9H2X6 1198 aa10.53□□□□□ -0.72
SMPD3-204ENST00000563396 SRD5A3Q9H8P0 318 aa10.53□□□□□ -0.72
SMPD3-204ENST00000563396 DYNC2H1Q8NCM8 4307 aaKnown RBP10.52□□□□□ -0.72
SMPD3-204ENST00000563396 A0A0G2JRQ6 117 aa10.52□□□□□ -0.73
SMPD3-204ENST00000563396 RBMY1BA6NDE4 496 aaKnown RBP10.52□□□□□ -0.73
SMPD3-204ENST00000563396 RBMY1EA6NEQ0 496 aaKnown RBP10.52□□□□□ -0.73
SMPD3-204ENST00000563396 DISC1C4P0D8 188 aa10.52□□□□□ -0.73
SMPD3-204ENST00000563396 TSPAN4O14817 238 aa10.52□□□□□ -0.73
SMPD3-204ENST00000563396 ST8SIA3O43173 380 aa10.52□□□□□ -0.73
SMPD3-204ENST00000563396 SCAF4O95104 1147 aaKnown RBP10.52□□□□□ -0.73
SMPD3-204ENST00000563396 CDS2O95674 445 aa10.52□□□□□ -0.73
SMPD3-204ENST00000563396 MT-CO2P00403 227 aa10.52□□□□□ -0.73
SMPD3-204ENST00000563396 OR5AC1P0C628 307 aa10.52□□□□□ -0.73
SMPD3-204ENST00000563396 RBMY1DP0C7P1 496 aaKnown RBP10.52□□□□□ -0.73
SMPD3-204ENST00000563396 ERHP84090 104 aaKnown RBP10.52□□□□□ -0.73
SMPD3-204ENST00000563396 RELQ04864 619 aaPredicted RBP10.52□□□□□ -0.73
SMPD3-204ENST00000563396 TRIM16LQ309B1 348 aa10.52□□□□□ -0.73
SMPD3-204ENST00000563396 BSXQ3C1V8 233 aa10.52□□□□□ -0.73
SMPD3-204ENST00000563396 ANKRD55Q3KP44 614 aa10.52□□□□□ -0.73
SMPD3-204ENST00000563396 Q56UQ5 140 aa10.52□□□□□ -0.73
SMPD3-204ENST00000563396 FAM219AQ8IW50 185 aa10.52□□□□□ -0.73
SMPD3-204ENST00000563396 SLC35G3Q8N808 338 aa10.52□□□□□ -0.73
SMPD3-204ENST00000563396 UBAC2Q8NBM4 344 aa10.52□□□□□ -0.73
SMPD3-204ENST00000563396 OR52B4Q8NGK2 314 aa10.52□□□□□ -0.73
SMPD3-204ENST00000563396 LHFPL5Q8TAF8 219 aa10.52□□□□□ -0.73
SMPD3-204ENST00000563396 PRRT1Q99946 306 aa10.52□□□□□ -0.73
SMPD3-204ENST00000563396 RTBDNQ9BSG5 229 aaPredicted RBP10.52□□□□□ -0.73
SMPD3-204ENST00000563396 C6orf62Q9GZU0 229 aaPredicted RBP10.52□□□□□ -0.73
SMPD3-204ENST00000563396 NAA60Q9H7X0 242 aa10.52□□□□□ -0.73
SMPD3-204ENST00000563396 RSL24D1Q9UHA3 163 aaKnown RBP10.52□□□□□ -0.73
SMPD3-204ENST00000563396 C14orf166Q9Y224 244 aaKnown RBP10.52□□□□□ -0.73
SMPD3-204ENST00000563396 CRYM-AS1A6NIL9 109 aa10.51□□□□□ -0.73
SMPD3-204ENST00000563396 NUPL2O15504 423 aaKnown RBP10.51□□□□□ -0.73
SMPD3-204ENST00000563396 MFAP4P55083 255 aa10.51□□□□□ -0.73
SMPD3-204ENST00000563396 SP6Q3SY56 376 aa10.51□□□□□ -0.73
SMPD3-204ENST00000563396 GLYATL2Q8WU03 294 aa10.51□□□□□ -0.73
SMPD3-204ENST00000563396 RBPMSQ93062 196 aaKnown RBP10.51□□□□□ -0.73
SMPD3-204ENST00000563396 MISP3Q96FF7 219 aa10.51□□□□□ -0.73
SMPD3-204ENST00000563396 LYSTQ99698 3801 aa10.51□□□□□ -0.73
SMPD3-204ENST00000563396 GPR132Q9UNW8 380 aa10.51□□□□□ -0.73
SMPD3-204ENST00000563396 SELENOKQ9Y6D0 94 aa10.51□□□□□ -0.73
SMPD3-204ENST00000563396 CORTO00230 105 aa10.5□□□□□ -0.73
SMPD3-204ENST00000563396 RNASE2P10153 161 aaKnown RBP10.5□□□□□ -0.73
SMPD3-204ENST00000563396 SPINK9Q5DT21 86 aa10.5□□□□□ -0.73
SMPD3-204ENST00000563396 DMRTA1Q5VZB9 504 aa10.5□□□□□ -0.73
SMPD3-204ENST00000563396 RBPMS2Q6ZRY4 209 aaKnown RBP10.5□□□□□ -0.73
SMPD3-204ENST00000563396 OR52E5Q8NH55 327 aa10.5□□□□□ -0.73
SMPD3-204ENST00000563396 TRIM63Q969Q1 353 aa10.5□□□□□ -0.73
SMPD3-204ENST00000563396 RRNAD1Q96FB5 475 aaKnown RBP10.5□□□□□ -0.73
SMPD3-204ENST00000563396 FAM110AQ9BQ89 295 aa10.5□□□□□ -0.73
SMPD3-204ENST00000563396 PDCD10Q9BUL8 212 aa10.5□□□□□ -0.73
SMPD3-204ENST00000563396 TEX13DA0A0J9YY54 714 aaPredicted RBP10.49□□□□□ -0.73
SMPD3-204ENST00000563396 TNFSF8P32971 234 aa10.49□□□□□ -0.73
SMPD3-204ENST00000563396 HOXA1P49639 335 aaPredicted RBP10.49□□□□□ -0.73
SMPD3-204ENST00000563396 DHODHQ02127 395 aa10.49□□□□□ -0.73
SMPD3-204ENST00000563396 Q6ZRM9 215 aa10.49□□□□□ -0.73
SMPD3-204ENST00000563396 OR51S1Q8NGJ8 323 aa10.49□□□□□ -0.73
SMPD3-204ENST00000563396 MCFD2Q8NI22 146 aa10.49□□□□□ -0.73
SMPD3-204ENST00000563396 IL22RA2Q969J5 263 aa10.49□□□□□ -0.73
SMPD3-204ENST00000563396 TMEM230Q96A57 120 aa10.49□□□□□ -0.73
SMPD3-204ENST00000563396 GALNT14Q96FL9 552 aa10.49□□□□□ -0.73
SMPD3-204ENST00000563396 C20orf24Q9BUV8 137 aa10.49□□□□□ -0.73
SMPD3-204ENST00000563396 RBM38Q9H0Z9 239 aaKnown RBP10.49□□□□□ -0.73
SMPD3-204ENST00000563396 RETNQ9HD89 108 aa10.49□□□□□ -0.73
SMPD3-204ENST00000563396 TMEM56-RWDD3S4R434 201 aa10.49□□□□□ -0.73
SMPD3-204ENST00000563396 IGHV7-4-1A0A0J9YVY3 117 aa10.48□□□□□ -0.73
SMPD3-204ENST00000563396 GNG7O60262 68 aa10.48□□□□□ -0.73
SMPD3-204ENST00000563396 IFNA17P01571 189 aa10.48□□□□□ -0.73
SMPD3-204ENST00000563396 LYL1P12980 280 aa10.48□□□□□ -0.73
SMPD3-204ENST00000563396 SNCAP37840 140 aa10.48□□□□□ -0.73
SMPD3-204ENST00000563396 ODF3L2Q3SX64 289 aa10.48□□□□□ -0.73
SMPD3-204ENST00000563396 LAMTOR1Q6IAA8 161 aa10.48□□□□□ -0.73
SMPD3-204ENST00000563396 PINX1Q96BK5 328 aaKnown RBP10.48□□□□□ -0.73
SMPD3-204ENST00000563396 GGTLC1Q9BX51 225 aa10.48□□□□□ -0.73
SMPD3-204ENST00000563396 ZFAND3Q9H8U3 227 aa10.48□□□□□ -0.73
SMPD3-204ENST00000563396 SMPXQ9UHP9 88 aa10.48□□□□□ -0.73
SMPD3-204ENST00000563396 V9GYH0 126 aa10.48□□□□□ -0.73
SMPD3-204ENST00000563396 IGHV3OR16-8A0A075B7F1 116 aa10.47□□□□□ -0.73
SMPD3-204ENST00000563396 FABP12A6NFH5 140 aa10.47□□□□□ -0.73
SMPD3-204ENST00000563396 IGHV3-48P01763 117 aa10.47□□□□□ -0.73
SMPD3-204ENST00000563396 NPBWR1P48145 328 aa10.47□□□□□ -0.73
SMPD3-204ENST00000563396 SUB1P53999 127 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMPD3-204ENST00000563396 SPCS3P61009 180 aa10.47□□□□□ -0.73
SMPD3-204ENST00000563396 SELENOHQ8IZQ5 122 aaKnown RBP10.47□□□□□ -0.73
SMPD3-204ENST00000563396 DUSP18Q8NEJ0 188 aa10.47□□□□□ -0.73
SMPD3-204ENST00000563396 RNASE11Q8TAA1 199 aaKnown RBP10.47□□□□□ -0.73
SMPD3-204ENST00000563396 FNDC4Q9H6D8 234 aaPredicted RBP10.47□□□□□ -0.73
SMPD3-204ENST00000563396 CACNG5Q9UF02 275 aa10.47□□□□□ -0.73
SMPD3-204ENST00000563396 SCP2D1Q9UJQ7 156 aa10.47□□□□□ -0.73
SMPD3-204ENST00000563396 SACSQ9NZJ4 4579 aa10.46□□□□□ -0.73
SMPD3-204ENST00000563396 LOC102724200A0A096LPH7 203 aaPredicted RBP10.46□□□□□ -0.73
SMPD3-204ENST00000563396 OR4C46A6NHA9 309 aa10.46□□□□□ -0.73
SMPD3-204ENST00000563396 CHEK1O14757 476 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms