RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 TMEM116Q8NCL8 245 aa12.47□□□□□ -0.41
TNRC6A-209ENST00000562829 RNASE11Q8TAA1 199 aaKnown RBP12.47□□□□□ -0.41
TNRC6A-209ENST00000562829 TP53RKQ96S44 253 aa12.47□□□□□ -0.41
TNRC6A-209ENST00000562829 RNF2Q99496 336 aa12.47□□□□□ -0.41
TNRC6A-209ENST00000562829 RHPN1-AS1Q9BWJ2 59 aa12.47□□□□□ -0.41
TNRC6A-209ENST00000562829 MTFP1Q9UDX5 166 aa12.47□□□□□ -0.41
TNRC6A-209ENST00000562829 C3orf85A0A1B0GTC6 90 aa12.46□□□□□ -0.41
TNRC6A-209ENST00000562829 CHEK1O14757 476 aa12.46□□□□□ -0.41
TNRC6A-209ENST00000562829 SPRY2O43597 315 aa12.46□□□□□ -0.41
TNRC6A-209ENST00000562829 IGKV1-5P01602 117 aa12.46□□□□□ -0.41
TNRC6A-209ENST00000562829 TBPP20226 339 aa12.46□□□□□ -0.41
TNRC6A-209ENST00000562829 FCGR2BP31994 310 aaPredicted RBP12.46□□□□□ -0.41
TNRC6A-209ENST00000562829 PMS2P11Q13670 270 aa12.46□□□□□ -0.41
TNRC6A-209ENST00000562829 Q6ZWC4 215 aa12.46□□□□□ -0.41
TNRC6A-209ENST00000562829 CCDC71LQ8N9Z2 235 aa12.46□□□□□ -0.41
TNRC6A-209ENST00000562829 ZFAND1Q8TCF1 268 aa12.46□□□□□ -0.41
TNRC6A-209ENST00000562829 C15orf40Q8WUR7 153 aa12.46□□□□□ -0.41
TNRC6A-209ENST00000562829 GINS3Q9BRX5 216 aa12.46□□□□□ -0.41
TNRC6A-209ENST00000562829 NXF2Q9GZY0 626 aaKnown RBP12.46□□□□□ -0.41
TNRC6A-209ENST00000562829 IGHV3OR16-13A0A075B7E8 117 aa12.45□□□□□ -0.42
TNRC6A-209ENST00000562829 TRAV14DV4A0A0A6YYC5 116 aa12.45□□□□□ -0.42
TNRC6A-209ENST00000562829 IGHV3-74A0A0B4J1X5 117 aa12.45□□□□□ -0.42
TNRC6A-209ENST00000562829 A0A0J9YWU9 116 aa12.45□□□□□ -0.42
TNRC6A-209ENST00000562829 UBE2CO00762 179 aa12.45□□□□□ -0.42
TNRC6A-209ENST00000562829 RGS5O15539 181 aa12.45□□□□□ -0.42
TNRC6A-209ENST00000562829 ST8SIA3O43173 380 aa12.45□□□□□ -0.42
TNRC6A-209ENST00000562829 RAB3DO95716 219 aa12.45□□□□□ -0.42
TNRC6A-209ENST00000562829 HOXA1P49639 335 aaPredicted RBP12.45□□□□□ -0.42
TNRC6A-209ENST00000562829 TAS2R19P59542 299 aa12.45□□□□□ -0.42
TNRC6A-209ENST00000562829 SP6Q3SY56 376 aa12.45□□□□□ -0.42
TNRC6A-209ENST00000562829 STPG3Q8N7X2 389 aa12.45□□□□□ -0.42
TNRC6A-209ENST00000562829 DUSP18Q8NEJ0 188 aa12.45□□□□□ -0.42
TNRC6A-209ENST00000562829 OR4D10Q8NGI6 311 aa12.45□□□□□ -0.42
TNRC6A-209ENST00000562829 OR10C1Q96KK4 312 aa12.45□□□□□ -0.42
TNRC6A-209ENST00000562829 ABHD1Q96SE0 405 aa12.45□□□□□ -0.42
TNRC6A-209ENST00000562829 C6orf62Q9GZU0 229 aaPredicted RBP12.45□□□□□ -0.42
TNRC6A-209ENST00000562829 ENY2Q9NPA8 101 aa12.45□□□□□ -0.42
TNRC6A-209ENST00000562829 TP53TG1Q9Y2A0 90 aa12.45□□□□□ -0.42
TNRC6A-209ENST00000562829 CXorf65A6NEN9 183 aa12.44□□□□□ -0.42
TNRC6A-209ENST00000562829 BMI1P35226 326 aa12.44□□□□□ -0.42
TNRC6A-209ENST00000562829 NPBWR1P48145 328 aa12.44□□□□□ -0.42
TNRC6A-209ENST00000562829 STEAP1BQ6NZ63 245 aa12.44□□□□□ -0.42
TNRC6A-209ENST00000562829 GPR141Q7Z602 305 aa12.44□□□□□ -0.42
TNRC6A-209ENST00000562829 APRG1Q8IVJ8 170 aa12.44□□□□□ -0.42
TNRC6A-209ENST00000562829 TMEM229BQ8NBD8 167 aa12.44□□□□□ -0.42
TNRC6A-209ENST00000562829 OR13C8Q8NGS7 320 aa12.44□□□□□ -0.42
TNRC6A-209ENST00000562829 TERB2Q8NHR7 220 aa12.44□□□□□ -0.42
TNRC6A-209ENST00000562829 MARCH1Q8TCQ1 289 aa12.44□□□□□ -0.42
TNRC6A-209ENST00000562829 RRNAD1Q96FB5 475 aaKnown RBP12.44□□□□□ -0.42
TNRC6A-209ENST00000562829 GALNT14Q96FL9 552 aa12.44□□□□□ -0.42
TNRC6A-209ENST00000562829 ZNF414Q96IQ9 312 aa12.44□□□□□ -0.42
TNRC6A-209ENST00000562829 A0A0B4J293 547 aa12.43□□□□□ -0.42
TNRC6A-209ENST00000562829 KIR2DL5BA0A0G2JN68 375 aa12.43□□□□□ -0.42
TNRC6A-209ENST00000562829 KIR2DL5BA0A0G2JPC4 375 aa12.43□□□□□ -0.42
TNRC6A-209ENST00000562829 ETV6P41212 452 aa12.43□□□□□ -0.42
TNRC6A-209ENST00000562829 SUB1P53999 127 aaKnown RBP eCLIP12.43□□□□□ -0.42
TNRC6A-209ENST00000562829 LYG2Q86SG7 212 aa12.43□□□□□ -0.42
TNRC6A-209ENST00000562829 KIR2DL5AQ8N109 375 aa12.43□□□□□ -0.42
TNRC6A-209ENST00000562829 GBGT1Q8N5D6 347 aa12.43□□□□□ -0.42
TNRC6A-209ENST00000562829 KIR2DL5BQ8NHK3 375 aa12.43□□□□□ -0.42
TNRC6A-209ENST00000562829 MRPS26Q9BYN8 205 aaKnown RBP12.43□□□□□ -0.42
TNRC6A-209ENST00000562829 GABARAPH6UMI1 98 aa12.42□□□□□ -0.42
TNRC6A-209ENST00000562829 CORTO00230 105 aa12.42□□□□□ -0.42
TNRC6A-209ENST00000562829 CD74P04233 296 aa12.42□□□□□ -0.42
TNRC6A-209ENST00000562829 P0C879 139 aa12.42□□□□□ -0.42
TNRC6A-209ENST00000562829 CMC4P56277 68 aaPredicted RBP12.42□□□□□ -0.42
TNRC6A-209ENST00000562829 PAFAH1B2P68402 229 aa12.42□□□□□ -0.42
TNRC6A-209ENST00000562829 ZNF124Q15973 351 aa12.42□□□□□ -0.42
TNRC6A-209ENST00000562829 FAAP20Q6NZ36 180 aa12.42□□□□□ -0.42
TNRC6A-209ENST00000562829 TOMM20LQ6UXN7 152 aa12.42□□□□□ -0.42
TNRC6A-209ENST00000562829 TCF24Q7RTU0 167 aa12.42□□□□□ -0.42
TNRC6A-209ENST00000562829 WFDC3Q8IUB2 231 aa12.42□□□□□ -0.42
TNRC6A-209ENST00000562829 MIXL1Q9H2W2 232 aa12.42□□□□□ -0.42
TNRC6A-209ENST00000562829 C14orf166Q9Y224 244 aaKnown RBP12.42□□□□□ -0.42
TNRC6A-209ENST00000562829 PUS1Q9Y606 427 aaKnown RBP eCLIP12.42□□□□□ -0.42
TNRC6A-209ENST00000562829 IGHV3-66A0A0C4DH42 116 aa12.41□□□□□ -0.42
TNRC6A-209ENST00000562829 A0A0G2JRQ6 117 aa12.41□□□□□ -0.42
TNRC6A-209ENST00000562829 RNASE2P10153 161 aaKnown RBP12.41□□□□□ -0.42
TNRC6A-209ENST00000562829 UCP1P25874 307 aa12.41□□□□□ -0.42
TNRC6A-209ENST00000562829 OPRK1P41145 380 aa12.41□□□□□ -0.42
TNRC6A-209ENST00000562829 RPL11P62913 178 aaKnown RBP12.41□□□□□ -0.42
TNRC6A-209ENST00000562829 MRPS10P82664 201 aaKnown RBP12.41□□□□□ -0.42
TNRC6A-209ENST00000562829 ZNF600Q6ZNG1 722 aa12.41□□□□□ -0.42
TNRC6A-209ENST00000562829 ST8SIA2Q92186 375 aa12.41□□□□□ -0.42
TNRC6A-209ENST00000562829 RNF183Q96D59 192 aa12.41□□□□□ -0.42
TNRC6A-209ENST00000562829 MAP6D1Q9H9H5 199 aa12.41□□□□□ -0.42
TNRC6A-209ENST00000562829 LYSTQ99698 3801 aa12.41□□□□□ -0.42
TNRC6A-209ENST00000562829 TEX13DA0A0J9YY54 714 aaPredicted RBP12.4□□□□□ -0.42
TNRC6A-209ENST00000562829 DISC1C4P0D8 188 aa12.4□□□□□ -0.42
TNRC6A-209ENST00000562829 INS-IGF2F8WCM5 200 aa12.4□□□□□ -0.42
TNRC6A-209ENST00000562829 DNASE2O00115 360 aaPredicted RBP12.4□□□□□ -0.42
TNRC6A-209ENST00000562829 CTDSP2O14595 271 aa12.4□□□□□ -0.42
TNRC6A-209ENST00000562829 B3GALNT1O75752 331 aa12.4□□□□□ -0.42
TNRC6A-209ENST00000562829 OR5AC1P0C628 307 aa12.4□□□□□ -0.42
TNRC6A-209ENST00000562829 EWSR1Q01844 656 aaKnown RBP eCLIP12.4□□□□□ -0.42
TNRC6A-209ENST00000562829 TNFRSF9Q07011 255 aa12.4□□□□□ -0.42
TNRC6A-209ENST00000562829 MEF2DQ14814 521 aa12.4□□□□□ -0.42
TNRC6A-209ENST00000562829 SPCS2Q15005 226 aa12.4□□□□□ -0.42
TNRC6A-209ENST00000562829 SCGB2A1O75556 95 aa12.39□□□□□ -0.43
TNRC6A-209ENST00000562829 TMEM50AO95807 157 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms