RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 CISHQ9NSE2 258 aa0.36□□□□□ -2.35
CHD9-207ENST00000562806 RASL12Q9NYN1 266 aa0.36□□□□□ -2.35
CHD9-207ENST00000562806 NKIRAS1Q9NYS0 192 aa0.36□□□□□ -2.35
CHD9-207ENST00000562806 LSM5Q9Y4Y9 91 aaKnown RBP0.36□□□□□ -2.35
CHD9-207ENST00000562806 ATP6V1DQ9Y5K8 247 aa0.36□□□□□ -2.35
CHD9-207ENST00000562806 ADGRB2O60241 1585 aa0.36□□□□□ -2.35
CHD9-207ENST00000562806 EVC2Q86UK5 1308 aa0.36□□□□□ -2.35
CHD9-207ENST00000562806 MED12LQ86YW9 2145 aa0.35□□□□□ -2.35
CHD9-207ENST00000562806 IGKV1D-42A0A075B6H8 117 aa0.35□□□□□ -2.35
CHD9-207ENST00000562806 A0A1W2PPM0 123 aa0.35□□□□□ -2.35
CHD9-207ENST00000562806 CETN3O15182 167 aa0.35□□□□□ -2.35
CHD9-207ENST00000562806 OR2B3O76000 313 aa0.35□□□□□ -2.35
CHD9-207ENST00000562806 CTSDP07339 412 aaPredicted RBP0.35□□□□□ -2.35
CHD9-207ENST00000562806 MIFP14174 115 aa0.35□□□□□ -2.35
CHD9-207ENST00000562806 ZNF93P35789 620 aaPredicted RBP0.35□□□□□ -2.35
CHD9-207ENST00000562806 TPM4P67936 248 aa0.35□□□□□ -2.35
CHD9-207ENST00000562806 RHOGP84095 191 aa0.35□□□□□ -2.35
CHD9-207ENST00000562806 SRSF6Q13247 344 aaKnown RBP0.35□□□□□ -2.35
CHD9-207ENST00000562806 PMAIP1Q13794 54 aa0.35□□□□□ -2.35
CHD9-207ENST00000562806 KISS1Q15726 138 aa0.35□□□□□ -2.35
CHD9-207ENST00000562806 KCNJ8Q15842 424 aa0.35□□□□□ -2.35
CHD9-207ENST00000562806 HIST3H3Q16695 136 aa0.35□□□□□ -2.35
CHD9-207ENST00000562806 Q6ZQT0 140 aa0.35□□□□□ -2.35
CHD9-207ENST00000562806 OOSP2Q86WS3 158 aa0.35□□□□□ -2.35
CHD9-207ENST00000562806 OR4E2Q8NGC2 313 aa0.35□□□□□ -2.35
CHD9-207ENST00000562806 AMELYQ99218 206 aa0.35□□□□□ -2.35
CHD9-207ENST00000562806 XPNPEP1Q9NQW7 623 aa0.35□□□□□ -2.35
CHD9-207ENST00000562806 MAP3K5Q99683 1374 aa0.34□□□□□ -2.35
CHD9-207ENST00000562806 TOPBP1Q92547 1522 aa0.34□□□□□ -2.35
CHD9-207ENST00000562806 COL4A5P29400 1685 aa0.34□□□□□ -2.35
CHD9-207ENST00000562806 EXPH5Q8NEV8 1989 aa0.34□□□□□ -2.35
CHD9-207ENST00000562806 C2orf70A6NJV1 201 aa0.34□□□□□ -2.36
CHD9-207ENST00000562806 EEF1E1-BLOC1S5C9J1V9 151 aa0.34□□□□□ -2.36
CHD9-207ENST00000562806 INE1O15225 51 aa0.34□□□□□ -2.36
CHD9-207ENST00000562806 IFNA10P01566 189 aa0.34□□□□□ -2.36
CHD9-207ENST00000562806 IGKV1-5P01602 117 aa0.34□□□□□ -2.36
CHD9-207ENST00000562806 FKBP2P26885 142 aaKnown RBP0.34□□□□□ -2.36
CHD9-207ENST00000562806 TCL1AP56279 114 aa0.34□□□□□ -2.36
CHD9-207ENST00000562806 MAGOHP61326 146 aaKnown RBP0.34□□□□□ -2.36
CHD9-207ENST00000562806 HBA1P69905 142 aa0.34□□□□□ -2.36
CHD9-207ENST00000562806 HIST2H3PS2Q5TEC6 136 aa0.34□□□□□ -2.36
CHD9-207ENST00000562806 LPCAT3Q6P1A2 487 aa0.34□□□□□ -2.36
CHD9-207ENST00000562806 SPATA8Q6RVD6 105 aa0.34□□□□□ -2.36
CHD9-207ENST00000562806 ALKAL1Q6UXT8 129 aa0.34□□□□□ -2.36
CHD9-207ENST00000562806 MIR17HGQ75NE6 70 aa0.34□□□□□ -2.36
CHD9-207ENST00000562806 BPIFA4PQ86YQ2 179 aa0.34□□□□□ -2.36
CHD9-207ENST00000562806 C20orf196Q8IYI0 205 aa0.34□□□□□ -2.36
CHD9-207ENST00000562806 ITFG2Q969R8 447 aa0.34□□□□□ -2.36
CHD9-207ENST00000562806 SLC35B4Q969S0 331 aa0.34□□□□□ -2.36
CHD9-207ENST00000562806 OR52E6Q96RD3 313 aa0.34□□□□□ -2.36
CHD9-207ENST00000562806 LLPHQ9BRT6 129 aaKnown RBP0.34□□□□□ -2.36
CHD9-207ENST00000562806 MRPS26Q9BYN8 205 aaKnown RBP0.34□□□□□ -2.36
CHD9-207ENST00000562806 ULBP3Q9BZM4 244 aa0.34□□□□□ -2.36
CHD9-207ENST00000562806 COMMD5Q9GZQ3 224 aa0.34□□□□□ -2.36
CHD9-207ENST00000562806 PRTFDC1Q9NRG1 225 aa0.34□□□□□ -2.36
CHD9-207ENST00000562806 NHP2Q9NX24 153 aaKnown RBP0.34□□□□□ -2.36
CHD9-207ENST00000562806 TAS2R4Q9NYW5 299 aa0.34□□□□□ -2.36
CHD9-207ENST00000562806 NCOA6Q14686 2063 aaPredicted RBP0.34□□□□□ -2.36
CHD9-207ENST00000562806 MAST2Q6P0Q8 1798 aa0.34□□□□□ -2.36
CHD9-207ENST00000562806 ANAPC1Q9H1A4 1944 aa0.33□□□□□ -2.36
CHD9-207ENST00000562806 PSMD12O00232 456 aaPredicted RBP0.33□□□□□ -2.36
CHD9-207ENST00000562806 TGOLN2O43493 480 aa0.33□□□□□ -2.36
CHD9-207ENST00000562806 PROSCO94903 275 aa0.33□□□□□ -2.36
CHD9-207ENST00000562806 CALB1P05937 261 aa0.33□□□□□ -2.36
CHD9-207ENST00000562806 CRYGAP11844 174 aa0.33□□□□□ -2.36
CHD9-207ENST00000562806 SPI1P17947 270 aa0.33□□□□□ -2.36
CHD9-207ENST00000562806 PSME3P61289 254 aa0.33□□□□□ -2.36
CHD9-207ENST00000562806 RHEBQ15382 184 aa0.33□□□□□ -2.36
CHD9-207ENST00000562806 KHDC3LQ587J8 217 aa0.33□□□□□ -2.36
CHD9-207ENST00000562806 LPCAT4Q643R3 524 aa0.33□□□□□ -2.36
CHD9-207ENST00000562806 CLVS1Q8IUQ0 354 aaPredicted RBP0.33□□□□□ -2.36
CHD9-207ENST00000562806 SBSPONQ8IVN8 264 aa0.33□□□□□ -2.36
CHD9-207ENST00000562806 TERB2Q8NHR7 220 aa0.33□□□□□ -2.36
CHD9-207ENST00000562806 KLK6Q92876 244 aa0.33□□□□□ -2.36
CHD9-207ENST00000562806 PTH2Q96A98 100 aa0.33□□□□□ -2.36
CHD9-207ENST00000562806 FBXL12Q9NXK8 326 aa0.33□□□□□ -2.36
CHD9-207ENST00000562806 LAMA4Q16363 1823 aa0.33□□□□□ -2.36
CHD9-207ENST00000562806 TNRC6BQ9UPQ9 1833 aaKnown RBP0.33□□□□□ -2.36
CHD9-207ENST00000562806 HECW1Q76N89 1606 aa0.32□□□□□ -2.36
CHD9-207ENST00000562806 DPRXA6NFQ7 191 aa0.32□□□□□ -2.36
CHD9-207ENST00000562806 UBL3O95164 117 aa0.32□□□□□ -2.36
CHD9-207ENST00000562806 HLA-DRB1P01911 266 aa0.32□□□□□ -2.36
CHD9-207ENST00000562806 CD79AP11912 226 aa0.32□□□□□ -2.36
CHD9-207ENST00000562806 SPCS3P61009 180 aa0.32□□□□□ -2.36
CHD9-207ENST00000562806 KRTAP21-1Q3LI58 79 aa0.32□□□□□ -2.36
CHD9-207ENST00000562806 CCDC122Q5T0U0 273 aa0.32□□□□□ -2.36
CHD9-207ENST00000562806 OR51D1Q8NGF3 324 aa0.32□□□□□ -2.36
CHD9-207ENST00000562806 OR5A1Q8NGJ0 315 aa0.32□□□□□ -2.36
CHD9-207ENST00000562806 SFT2D1Q8WV19 159 aa0.32□□□□□ -2.36
CHD9-207ENST00000562806 DNAJC9Q8WXX5 260 aa0.32□□□□□ -2.36
CHD9-207ENST00000562806 TOMM6Q96B49 74 aa0.32□□□□□ -2.36
CHD9-207ENST00000562806 IMP4Q96G21 291 aaKnown RBP0.32□□□□□ -2.36
CHD9-207ENST00000562806 NIPSNAP1Q9BPW8 284 aa0.32□□□□□ -2.36
CHD9-207ENST00000562806 TMEM70Q9BUB7 260 aa0.32□□□□□ -2.36
CHD9-207ENST00000562806 ACER3Q9NUN7 267 aa0.32□□□□□ -2.36
CHD9-207ENST00000562806 CMTM6Q9NX76 183 aa0.32□□□□□ -2.36
CHD9-207ENST00000562806 TP73-AS1Q9UF72 201 aa0.32□□□□□ -2.36
CHD9-207ENST00000562806 HS3ST2Q9Y278 367 aa0.32□□□□□ -2.36
CHD9-207ENST00000562806 TMEM56-RWDD3S4R434 201 aa0.32□□□□□ -2.36
CHD9-207ENST00000562806 RP1P56715 2156 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms