RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 GATAD1Q8WUU5 269 aa12.25□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 MRGPRFQ96AM1 343 aa12.25□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 PINX1Q96BK5 328 aaKnown RBP12.25□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 APOHP02749 345 aaPredicted RBP12.24□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 LPCAT3Q6P1A2 487 aa12.24□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 LILRB2Q8N423 598 aa12.24□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 RARRES2Q99969 163 aa12.24□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 GNG7O60262 68 aa12.23□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 S100GP29377 79 aa12.23□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 CMC4P56277 68 aaPredicted RBP12.23□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 NANOS2P60321 138 aaKnown RBP12.23□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 HSPE1P61604 102 aaKnown RBP12.23□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 IZUMO4Q1ZYL8 232 aa12.23□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 SPINK9Q5DT21 86 aa12.23□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 LGALS9CQ6DKI2 356 aa12.23□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 TOMM20LQ6UXN7 152 aa12.23□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 TCF24Q7RTU0 167 aa12.23□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 ST8SIA2Q92186 375 aa12.23□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 CMTM3Q96MX0 182 aa12.23□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 C11orf68Q9H3H3 251 aaKnown RBP12.23□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 VSIRQ9H7M9 311 aa12.23□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 ZFAND3Q9H8U3 227 aa12.23□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 UCP3P55916 312 aa12.22□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 SNX29P2Q8IUI4 249 aa12.22□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 OR11H2Q8NH07 326 aa12.22□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 MS4A6AQ9H2W1 248 aa12.22□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 SCPEP1Q9HB40 452 aa12.22□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 COMMD3Q9UBI1 195 aa12.22□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 IGHV3-66A0A0C4DH42 116 aa12.21□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 CA1P00915 261 aaPredicted RBP12.21□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 IGKV1-5P01602 117 aa12.21□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 APOA1P02647 267 aa12.21□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 RCVRNP35243 200 aa12.21□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 ERHP84090 104 aaKnown RBP12.21□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 FAM24BQ8N5W8 94 aa12.21□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 C11orf45Q8TAV5 145 aa12.21□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 GINS3Q9BRX5 216 aa12.21□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 DNAH6Q9C0G6 4158 aa12.21□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 M0QYG6 137 aa12.2□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 DEFB4AO15263 64 aa12.2□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 ST8SIA3O43173 380 aa12.2□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 DFFBO76075 338 aa12.2□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 P0C879 139 aa12.2□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 NCS1P62166 190 aa12.2□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 PAFAH1B2P68402 229 aa12.2□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 LEMD1Q68G75 181 aa12.2□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 KRTAP17-1Q9BYP8 105 aa12.2□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 FBXL17Q9UF56 701 aa12.2□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 PUS1Q9Y606 427 aaKnown RBP eCLIP12.2□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 A0A0B4J293 547 aa12.19□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 A0A1B0GU03 582 aa12.19□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 SMIM31A0A1B0GVY4 71 aa12.19□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 CD5P06127 495 aa12.19□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 ELK1P19419 428 aa12.19□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 PI3P19957 117 aa12.19□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 NPBWR1P48145 328 aa12.19□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 DEFB131AP59861 70 aa12.19□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 RND3P61587 244 aa12.19□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 RBMS2Q15434 407 aaKnown RBP12.19□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 PVRIGQ6DKI7 326 aa12.19□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 ZNF600Q6ZNG1 722 aa12.19□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 DUSP18Q8NEJ0 188 aa12.19□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 TP53RKQ96S44 253 aa12.19□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 MFFQ9GZY8 342 aa12.19□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 INS-IGF2F8WCM5 200 aa12.18□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 DNASE2O00115 360 aaPredicted RBP12.18□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 HPGDSO60760 199 aa12.18□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 TMEM50AO95807 157 aa12.18□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 SNCAP37840 140 aa12.18□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 LHFPL1Q86WI0 220 aa12.18□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 MRPL36Q9P0J6 103 aaKnown RBP12.18□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 A0A087WXM4 84 aa12.17□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 TRAV2A0A0B4J234 112 aa12.17□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 RNASE2P10153 161 aaKnown RBP12.17□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 PIGPP57054 158 aa12.17□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 VBP1P61758 197 aa12.17□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 RPL11P62913 178 aaKnown RBP12.17□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 PRR20EP86478 221 aa12.17□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 PRR20CP86479 221 aa12.17□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 PRR20DP86480 221 aa12.17□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 PRR20BP86481 221 aa12.17□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 PRR20AP86496 221 aa12.17□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 TMEM187Q14656 261 aa12.17□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 RNASE12Q5GAN4 147 aaKnown RBP12.17□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 SLC35G3Q8N808 338 aa12.17□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 ZNF486Q96H40 463 aaPredicted RBP12.17□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 VCX3AQ9NNX9 186 aa12.17□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 KLK11Q9UBX7 282 aa12.17□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 IFNA4P05014 189 aa12.16□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 GIG44P09565 113 aaPredicted RBP12.16□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 PGAM2P15259 253 aa12.16□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 AKR1C2P52895 323 aa12.16□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 Q8NAQ8 132 aa12.16□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 C2CD4CQ8TF44 421 aa12.16□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 FUNDC2Q9BWH2 189 aa12.16□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 FNDC4Q9H6D8 234 aaPredicted RBP12.16□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 RABAC1Q9UI14 185 aa12.16□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 A0A0G2JRQ6 117 aa12.15□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 IFNA17P01571 189 aa12.15□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 ETV6P41212 452 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms