RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 FOXH1O75593 365 aa7.88□□□□□ -1.15
SMG1-205ENST00000561947 ACTL6BO94805 426 aa7.88□□□□□ -1.15
SMG1-205ENST00000561947 GATA2P23769 480 aaPredicted RBP7.88□□□□□ -1.15
SMG1-205ENST00000561947 RPL35P42766 123 aaKnown RBP7.88□□□□□ -1.15
SMG1-205ENST00000561947 AKR1D1P51857 326 aa7.88□□□□□ -1.15
SMG1-205ENST00000561947 KIAA0141Q14154 515 aaPredicted RBP7.88□□□□□ -1.15
SMG1-205ENST00000561947 C4orf17Q53FE4 359 aa7.88□□□□□ -1.15
SMG1-205ENST00000561947 MRPL41Q8IXM3 137 aaKnown RBP7.88□□□□□ -1.15
SMG1-205ENST00000561947 ACY3Q96HD9 319 aa7.88□□□□□ -1.15
SMG1-205ENST00000561947 C19orf24Q9BVV8 132 aa7.88□□□□□ -1.15
SMG1-205ENST00000561947 SSBP3Q9BWW4 388 aaPredicted RBP7.88□□□□□ -1.15
SMG1-205ENST00000561947 FNDC4Q9H6D8 234 aaPredicted RBP7.88□□□□□ -1.15
SMG1-205ENST00000561947 DOK5Q9P104 306 aa7.88□□□□□ -1.15
SMG1-205ENST00000561947 YTHDF2Q9Y5A9 579 aaKnown RBP7.88□□□□□ -1.15
SMG1-205ENST00000561947 A0A1W2PPR1 153 aa7.88□□□□□ -1.15
SMG1-205ENST00000561947 IGLC7A0M8Q6 106 aa7.88□□□□□ -1.15
SMG1-205ENST00000561947 NDUFB4O95168 129 aa7.88□□□□□ -1.15
SMG1-205ENST00000561947 OR5G3P0C626 314 aa7.88□□□□□ -1.15
SMG1-205ENST00000561947 RPL27AP46776 148 aaKnown RBP7.88□□□□□ -1.15
SMG1-205ENST00000561947 TNXAQ16473 311 aa7.88□□□□□ -1.15
SMG1-205ENST00000561947 ITLN2Q8WWU7 325 aaPredicted RBP7.88□□□□□ -1.15
SMG1-205ENST00000561947 SIGLEC9Q9Y336 463 aa7.88□□□□□ -1.15
SMG1-205ENST00000561947 TPRP12270 2363 aaKnown RBP7.88□□□□□ -1.15
SMG1-205ENST00000561947 M0R1W7 72 aa7.87□□□□□ -1.15
SMG1-205ENST00000561947 REG1AP05451 166 aa7.87□□□□□ -1.15
SMG1-205ENST00000561947 TPTE2P1Q5T6R2 138 aa7.87□□□□□ -1.15
SMG1-205ENST00000561947 LINC00518Q8N0U6 118 aa7.87□□□□□ -1.15
SMG1-205ENST00000561947 ZNF114Q8NC26 417 aa7.87□□□□□ -1.15
SMG1-205ENST00000561947 FAM210BQ96KR6 192 aa7.87□□□□□ -1.15
SMG1-205ENST00000561947 TECRQ9NZ01 308 aaKnown RBP7.87□□□□□ -1.15
SMG1-205ENST00000561947 METTL1Q9UBP6 276 aaKnown RBP7.87□□□□□ -1.15
SMG1-205ENST00000561947 NAV3Q8IVL0 2385 aa7.87□□□□□ -1.15
SMG1-205ENST00000561947 HIVEP3Q5T1R4 2406 aa7.87□□□□□ -1.15
SMG1-205ENST00000561947 TRBV24-1A0A075B6N3 115 aa7.87□□□□□ -1.15
SMG1-205ENST00000561947 LOC105371242A0A075B767 164 aa7.87□□□□□ -1.15
SMG1-205ENST00000561947 H7BYZ3 331 aa7.87□□□□□ -1.15
SMG1-205ENST00000561947 UBE2CO00762 179 aa7.87□□□□□ -1.15
SMG1-205ENST00000561947 IGHV2-5P01817 119 aa7.87□□□□□ -1.15
SMG1-205ENST00000561947 UQCRFS1P47985 274 aa7.87□□□□□ -1.15
SMG1-205ENST00000561947 COMPP49747 757 aaPredicted RBP7.87□□□□□ -1.15
SMG1-205ENST00000561947 ARF6P62330 175 aa7.87□□□□□ -1.15
SMG1-205ENST00000561947 PVRIGQ6DKI7 326 aa7.87□□□□□ -1.15
SMG1-205ENST00000561947 THAP8Q8NA92 274 aa7.87□□□□□ -1.15
SMG1-205ENST00000561947 OR11H6Q8NGC7 330 aa7.87□□□□□ -1.15
SMG1-205ENST00000561947 ANAPC16Q96DE5 110 aa7.87□□□□□ -1.15
SMG1-205ENST00000561947 RNF5Q99942 180 aa7.87□□□□□ -1.15
SMG1-205ENST00000561947 DERL1Q9BUN8 251 aa7.87□□□□□ -1.15
SMG1-205ENST00000561947 TMEM167BQ9NRX6 74 aa7.87□□□□□ -1.15
SMG1-205ENST00000561947 ARL2-SNX15V9GYD0 113 aa7.87□□□□□ -1.15
SMG1-205ENST00000561947 PLXNB1O43157 2135 aa7.87□□□□□ -1.15
SMG1-205ENST00000561947 SCO2A0A1W2PP80 73 aa7.86□□□□□ -1.15
SMG1-205ENST00000561947 HTR1DP28221 377 aa7.86□□□□□ -1.15
SMG1-205ENST00000561947 SSBP2P81877 361 aaPredicted RBP7.86□□□□□ -1.15
SMG1-205ENST00000561947 LDLRAD2Q5SZI1 272 aa7.86□□□□□ -1.15
SMG1-205ENST00000561947 PPP1R27Q86WC6 154 aa7.86□□□□□ -1.15
SMG1-205ENST00000561947 NPIPB3Q92617 1050 aa7.86□□□□□ -1.15
SMG1-205ENST00000561947 MRPL32Q9BYC8 188 aaKnown RBP7.86□□□□□ -1.15
SMG1-205ENST00000561947 ARHGAP32A7KAX9 2087 aa7.86□□□□□ -1.15
SMG1-205ENST00000561947 IGKV1D-37A0A075B6S9 117 aa7.86□□□□□ -1.15
SMG1-205ENST00000561947 PSMB11A5LHX3 300 aa7.86□□□□□ -1.15
SMG1-205ENST00000561947 AP4M1O00189 453 aa7.86□□□□□ -1.15
SMG1-205ENST00000561947 PFN1P07737 140 aaKnown RBP7.86□□□□□ -1.15
SMG1-205ENST00000561947 AREGP15514 252 aa7.86□□□□□ -1.15
SMG1-205ENST00000561947 GNLYP22749 145 aa7.86□□□□□ -1.15
SMG1-205ENST00000561947 CDKN1AP38936 164 aa7.86□□□□□ -1.15
SMG1-205ENST00000561947 TAS2R45P59539 299 aa7.86□□□□□ -1.15
SMG1-205ENST00000561947 PQLC2Q6ZP29 291 aa7.86□□□□□ -1.15
SMG1-205ENST00000561947 LINC01551Q86U37 167 aa7.86□□□□□ -1.15
SMG1-205ENST00000561947 TMEM37Q8WXS4 190 aa7.86□□□□□ -1.15
SMG1-205ENST00000561947 RNF2Q99496 336 aa7.86□□□□□ -1.15
SMG1-205ENST00000561947 MRPL36Q9P0J6 103 aaKnown RBP7.86□□□□□ -1.15
SMG1-205ENST00000561947 HRNRQ86YZ3 2850 aaPredicted RBP7.86□□□□□ -1.15
SMG1-205ENST00000561947 TCRBV4S1A1TA0A5B7 111 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 TIMM23O14925 209 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 TGOLN2O43493 480 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 PRTN3P24158 256 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 GPR6P46095 362 aaPredicted RBP7.85□□□□□ -1.15
SMG1-205ENST00000561947 GALR1P47211 349 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 ETFRF1Q6IPR1 90 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 HCP5Q6MZN7 132 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 C11orf52Q96A22 123 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 ZNF503Q96F45 646 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 UHRF2Q96PU4 802 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 OR5B12Q96R08 314 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 FBXL15Q9H469 300 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 UBTD1Q9HAC8 227 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 DPM3Q9P2X0 92 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 NCOR2Q9Y618 2525 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 LRBAP50851 2863 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 A6NNC1 897 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 ODF3BA8MYP8 253 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 TEX22C9J3V5 150 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 OR7C2O60412 319 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 IGHV3-48P01763 117 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 CRYGCP07315 174 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 C8orf88P0DMB2 117 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 S100PP25815 95 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 MFAP2P55001 183 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 FABP9Q0Z7S8 132 aa7.85□□□□□ -1.15
SMG1-205ENST00000561947 KLRD1Q13241 179 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms