RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 TOMM40O96008 361 aa9.01□□□□□ -0.97
NEIL1-202ENST00000561643 SAA2P0DJI9 122 aaPredicted RBP9.01□□□□□ -0.97
NEIL1-202ENST00000561643 C17orf58Q2M2W7 97 aa9.01□□□□□ -0.97
NEIL1-202ENST00000561643 CT45A1Q5HYN5 189 aa9.01□□□□□ -0.97
NEIL1-202ENST00000561643 ZNF114Q8NC26 417 aa9.01□□□□□ -0.97
NEIL1-202ENST00000561643 CT45A3Q8NHU0 189 aa9.01□□□□□ -0.97
NEIL1-202ENST00000561643 NPVFQ9HCQ7 196 aa9.01□□□□□ -0.97
NEIL1-202ENST00000561643 TRGV10A0A0A0MS01 117 aa9.01□□□□□ -0.97
NEIL1-202ENST00000561643 PRSS46E5RG02 174 aa9.01□□□□□ -0.97
NEIL1-202ENST00000561643 CXorf1O96002 111 aa9.01□□□□□ -0.97
NEIL1-202ENST00000561643 LHBP01229 141 aa9.01□□□□□ -0.97
NEIL1-202ENST00000561643 CTRLP40313 264 aa9.01□□□□□ -0.97
NEIL1-202ENST00000561643 TMEM249Q2WGJ8 235 aa9.01□□□□□ -0.97
NEIL1-202ENST00000561643 OR4A47Q6IF82 309 aa9.01□□□□□ -0.97
NEIL1-202ENST00000561643 DUX4L9Q6RFH8 374 aaPredicted RBP9.01□□□□□ -0.97
NEIL1-202ENST00000561643 SIGLECL1Q8N7X8 197 aa9.01□□□□□ -0.97
NEIL1-202ENST00000561643 Q8N976 141 aa9.01□□□□□ -0.97
NEIL1-202ENST00000561643 DDB2Q92466 427 aa9.01□□□□□ -0.97
NEIL1-202ENST00000561643 KBTBD11-OT1A0A1B0GTJ5 212 aa9□□□□□ -0.97
NEIL1-202ENST00000561643 STAG3L2P0CL84 134 aa9□□□□□ -0.97
NEIL1-202ENST00000561643 STAG3L3P0CL85 134 aa9□□□□□ -0.97
NEIL1-202ENST00000561643 NPY1RP25929 384 aa9□□□□□ -0.97
NEIL1-202ENST00000561643 TMPRSS3P57727 454 aa9□□□□□ -0.97
NEIL1-202ENST00000561643 SELENOVP59797 346 aa9□□□□□ -0.97
NEIL1-202ENST00000561643 TRGV8A0A0C4DH27 118 aa9□□□□□ -0.97
NEIL1-202ENST00000561643 PPBPP02775 128 aa9□□□□□ -0.97
NEIL1-202ENST00000561643 FRMD6-AS1P0C7T7 363 aa9□□□□□ -0.97
NEIL1-202ENST00000561643 THBS3P49746 956 aa9□□□□□ -0.97
NEIL1-202ENST00000561643 NHLH1Q02575 133 aa9□□□□□ -0.97
NEIL1-202ENST00000561643 RNF7Q9UBF6 113 aa9□□□□□ -0.97
NEIL1-202ENST00000561643 IGHV2-70DA0A0C4DH43 119 aa9□□□□□ -0.97
NEIL1-202ENST00000561643 TMPRSS2O15393 492 aa9□□□□□ -0.97
NEIL1-202ENST00000561643 PMCHP20382 165 aa9□□□□□ -0.97
NEIL1-202ENST00000561643 HSPE1P61604 102 aaKnown RBP9□□□□□ -0.97
NEIL1-202ENST00000561643 TNFAIP6P98066 277 aaPredicted RBP9□□□□□ -0.97
NEIL1-202ENST00000561643 TEPPQ6URK8 271 aa9□□□□□ -0.97
NEIL1-202ENST00000561643 MRPL18Q9H0U6 180 aaKnown RBP9□□□□□ -0.97
NEIL1-202ENST00000561643 ZNF586Q9NXT0 402 aa9□□□□□ -0.97
NEIL1-202ENST00000561643 CFAP47Q6ZTR5 3102 aa9□□□□□ -0.97
NEIL1-202ENST00000561643 SPENQ96T58 3664 aaKnown RBP9□□□□□ -0.97
NEIL1-202ENST00000561643 MDFIC2A0A1B0GVS7 189 aa8.99□□□□□ -0.97
NEIL1-202ENST00000561643 CGB3P0DN86 165 aa8.99□□□□□ -0.97
NEIL1-202ENST00000561643 CGB7P0DN87 165 aa8.99□□□□□ -0.97
NEIL1-202ENST00000561643 RAB31Q13636 194 aa8.99□□□□□ -0.97
NEIL1-202ENST00000561643 TP73-AS1Q9UF72 201 aa8.99□□□□□ -0.97
NEIL1-202ENST00000561643 TBL2Q9Y4P3 447 aaKnown RBP8.99□□□□□ -0.97
NEIL1-202ENST00000561643 FAM215AQ9Y5M1 114 aa8.99□□□□□ -0.97
NEIL1-202ENST00000561643 ZNF292O60281 2723 aa8.99□□□□□ -0.97
NEIL1-202ENST00000561643 SPTA1P02549 2419 aa8.99□□□□□ -0.97
NEIL1-202ENST00000561643 SCO2A0A1W2PP80 73 aa8.99□□□□□ -0.97
NEIL1-202ENST00000561643 MYOD1P15172 320 aa8.99□□□□□ -0.97
NEIL1-202ENST00000561643 PRRX1P54821 245 aa8.99□□□□□ -0.97
NEIL1-202ENST00000561643 STPG3Q8N7X2 389 aa8.99□□□□□ -0.97
NEIL1-202ENST00000561643 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.99□□□□□ -0.97
NEIL1-202ENST00000561643 CCL13Q99616 98 aa8.99□□□□□ -0.97
NEIL1-202ENST00000561643 TXNDC17Q9BRA2 123 aa8.99□□□□□ -0.97
NEIL1-202ENST00000561643 GCM1Q9NP62 436 aa8.99□□□□□ -0.97
NEIL1-202ENST00000561643 BET1LQ9NYM9 111 aa8.99□□□□□ -0.97
NEIL1-202ENST00000561643 FOXA2Q9Y261 457 aaPredicted RBP8.99□□□□□ -0.97
NEIL1-202ENST00000561643 LSM4Q9Y4Z0 139 aaKnown RBP8.99□□□□□ -0.97
NEIL1-202ENST00000561643 TET2Q6N021 2002 aaPredicted RBP8.99□□□□□ -0.97
NEIL1-202ENST00000561643 IGF2RP11717 2491 aa8.99□□□□□ -0.97
NEIL1-202ENST00000561643 IGLV3-9A0A075B6K5 115 aa8.99□□□□□ -0.97
NEIL1-202ENST00000561643 CEACAM4O75871 244 aa8.99□□□□□ -0.97
NEIL1-202ENST00000561643 CA2P00918 260 aa8.99□□□□□ -0.97
NEIL1-202ENST00000561643 CD99P14209 185 aa8.99□□□□□ -0.97
NEIL1-202ENST00000561643 TMEM14BQ9NUH8 114 aa8.99□□□□□ -0.97
NEIL1-202ENST00000561643 IDI2-AS1Q9NZ38 188 aa8.99□□□□□ -0.97
NEIL1-202ENST00000561643 GCHFRP30047 84 aa8.98□□□□□ -0.97
NEIL1-202ENST00000561643 AMTP48728 403 aa8.98□□□□□ -0.97
NEIL1-202ENST00000561643 RHOBP62745 196 aa8.98□□□□□ -0.97
NEIL1-202ENST00000561643 SPATA31B1PQ5VZV4 182 aa8.98□□□□□ -0.97
NEIL1-202ENST00000561643 WDR73Q6P4I2 378 aa8.98□□□□□ -0.97
NEIL1-202ENST00000561643 SFRP2Q96HF1 295 aa8.98□□□□□ -0.97
NEIL1-202ENST00000561643 ADTRPQ96IZ2 230 aa8.98□□□□□ -0.97
NEIL1-202ENST00000561643 OR51B2Q9Y5P1 312 aa8.98□□□□□ -0.97
NEIL1-202ENST00000561643 PLCE1Q9P212 2302 aa8.98□□□□□ -0.97
NEIL1-202ENST00000561643 TRBV20OR9-2A0A075B6H5 130 aa8.98□□□□□ -0.97
NEIL1-202ENST00000561643 GATA4P43694 442 aa8.98□□□□□ -0.97
NEIL1-202ENST00000561643 YPEL3P61236 119 aaPredicted RBP8.98□□□□□ -0.97
NEIL1-202ENST00000561643 ZNF90Q03938 601 aa8.98□□□□□ -0.97
NEIL1-202ENST00000561643 FOXL1Q12952 345 aa8.98□□□□□ -0.97
NEIL1-202ENST00000561643 EFNB3Q15768 340 aa8.98□□□□□ -0.97
NEIL1-202ENST00000561643 PRR27Q6MZM9 219 aa8.98□□□□□ -0.97
NEIL1-202ENST00000561643 FAM216BQ8N7L0 139 aa8.98□□□□□ -0.97
NEIL1-202ENST00000561643 C1orf159Q96HA4 380 aa8.98□□□□□ -0.97
NEIL1-202ENST00000561643 NRN1Q9NPD7 142 aa8.98□□□□□ -0.97
NEIL1-202ENST00000561643 DSCAMO60469 2012 aa8.98□□□□□ -0.97
NEIL1-202ENST00000561643 ZFHX4Q86UP3 3567 aa8.98□□□□□ -0.97
NEIL1-202ENST00000561643 FCN1O00602 326 aa8.97□□□□□ -0.97
NEIL1-202ENST00000561643 IGHV1-46P01743 117 aa8.97□□□□□ -0.97
NEIL1-202ENST00000561643 TNFSF4P23510 183 aa8.97□□□□□ -0.97
NEIL1-202ENST00000561643 TSPOP30536 169 aa8.97□□□□□ -0.97
NEIL1-202ENST00000561643 IER3P46695 156 aa8.97□□□□□ -0.97
NEIL1-202ENST00000561643 STUMQ69YW2 141 aa8.97□□□□□ -0.97
NEIL1-202ENST00000561643 FAM222BQ8WU58 562 aa8.97□□□□□ -0.97
NEIL1-202ENST00000561643 YTHDF2Q9Y5A9 579 aaKnown RBP8.97□□□□□ -0.97
NEIL1-202ENST00000561643 CHD8Q9HCK8 2581 aa8.97□□□□□ -0.97
NEIL1-202ENST00000561643 BOD1L1Q8NFC6 3051 aa8.97□□□□□ -0.97
NEIL1-202ENST00000561643 SLC17A3O00476 420 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms