RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 ZNF502Q8TBZ5 544 aa7.73□□□□□ -1.17
HERC1-212ENST00000561348 SCARB1Q8WTV0 552 aa7.73□□□□□ -1.17
HERC1-212ENST00000561348 CACNG8Q8WXS5 425 aa7.73□□□□□ -1.17
HERC1-212ENST00000561348 SLC25A21Q9BQT8 299 aaPredicted RBP7.73□□□□□ -1.17
HERC1-212ENST00000561348 PGPEP1Q9NXJ5 209 aa7.73□□□□□ -1.17
HERC1-212ENST00000561348 PAIP2BQ9ULR5 123 aaKnown RBP7.73□□□□□ -1.17
HERC1-212ENST00000561348 FLVCR2Q9UPI3 526 aa7.73□□□□□ -1.17
HERC1-212ENST00000561348 MT-CO2P00403 227 aa7.72□□□□□ -1.17
HERC1-212ENST00000561348 CSN3P07498 182 aa7.72□□□□□ -1.17
HERC1-212ENST00000561348 HOXB5P09067 269 aa7.72□□□□□ -1.17
HERC1-212ENST00000561348 SUPT4H1P63272 117 aaKnown RBP7.72□□□□□ -1.17
HERC1-212ENST00000561348 PPP1R1AQ13522 171 aa7.72□□□□□ -1.17
HERC1-212ENST00000561348 RBMS2Q15434 407 aaKnown RBP7.72□□□□□ -1.17
HERC1-212ENST00000561348 TMEM128Q5BJH2 165 aa7.72□□□□□ -1.17
HERC1-212ENST00000561348 FAM209BQ5JX69 171 aa7.72□□□□□ -1.17
HERC1-212ENST00000561348 FAM219AQ8IW50 185 aa7.72□□□□□ -1.17
HERC1-212ENST00000561348 OR1P1Q8NH06 330 aa7.72□□□□□ -1.17
HERC1-212ENST00000561348 VN1R17PQ8TDU5 208 aa7.72□□□□□ -1.17
HERC1-212ENST00000561348 SDHCQ99643 169 aaPredicted RBP7.72□□□□□ -1.17
HERC1-212ENST00000561348 ASCL2Q99929 193 aa7.72□□□□□ -1.17
HERC1-212ENST00000561348 TMEM56-RWDD3S4R434 201 aa7.72□□□□□ -1.17
HERC1-212ENST00000561348 NAP1L6A6NFF2 107 aa7.71□□□□□ -1.18
HERC1-212ENST00000561348 TGOLN2O43493 480 aa7.71□□□□□ -1.18
HERC1-212ENST00000561348 GNG7O60262 68 aa7.71□□□□□ -1.18
HERC1-212ENST00000561348 P0C879 139 aa7.71□□□□□ -1.18
HERC1-212ENST00000561348 FOLR2P14207 255 aa7.71□□□□□ -1.18
HERC1-212ENST00000561348 OPRK1P41145 380 aa7.71□□□□□ -1.18
HERC1-212ENST00000561348 MFAP4P55083 255 aa7.71□□□□□ -1.18
HERC1-212ENST00000561348 SPCS3P61009 180 aa7.71□□□□□ -1.18
HERC1-212ENST00000561348 SRPXP78539 464 aa7.71□□□□□ -1.18
HERC1-212ENST00000561348 C4orf46Q504U0 113 aa7.71□□□□□ -1.18
HERC1-212ENST00000561348 TM4SF20Q53R12 229 aa7.71□□□□□ -1.18
HERC1-212ENST00000561348 C11orf87Q6NUJ2 197 aa7.71□□□□□ -1.18
HERC1-212ENST00000561348 CADM3Q8N126 398 aa7.71□□□□□ -1.18
HERC1-212ENST00000561348 GALNT14Q96FL9 552 aa7.71□□□□□ -1.18
HERC1-212ENST00000561348 HIPK2Q9H2X6 1198 aa7.71□□□□□ -1.18
HERC1-212ENST00000561348 SORL1Q92673 2214 aa7.71□□□□□ -1.18
HERC1-212ENST00000561348 TGP01266 2768 aa7.7□□□□□ -1.18
HERC1-212ENST00000561348 TRAV6A0A075B6T7 132 aa7.7□□□□□ -1.18
HERC1-212ENST00000561348 IGHV3-49A0A0A0MS15 119 aa7.7□□□□□ -1.18
HERC1-212ENST00000561348 A0A0B4J2A0 478 aa7.7□□□□□ -1.18
HERC1-212ENST00000561348 IZUMO1RA6ND01 250 aa7.7□□□□□ -1.18
HERC1-212ENST00000561348 C2orf70A6NJV1 201 aa7.7□□□□□ -1.18
HERC1-212ENST00000561348 K7EIM0 57 aa7.7□□□□□ -1.18
HERC1-212ENST00000561348 NUPL2O15504 423 aaKnown RBP7.7□□□□□ -1.18
HERC1-212ENST00000561348 SFT2D2O95562 160 aa7.7□□□□□ -1.18
HERC1-212ENST00000561348 IFNA10P01566 189 aa7.7□□□□□ -1.18
HERC1-212ENST00000561348 IGLV1-51P01701 117 aa7.7□□□□□ -1.18
HERC1-212ENST00000561348 ANXA7P20073 488 aaKnown RBP7.7□□□□□ -1.18
HERC1-212ENST00000561348 SMCPP49901 116 aaPredicted RBP7.7□□□□□ -1.18
HERC1-212ENST00000561348 SMCO1Q147U7 214 aa7.7□□□□□ -1.18
HERC1-212ENST00000561348 MLANAQ16655 118 aa7.7□□□□□ -1.18
HERC1-212ENST00000561348 ANKRD55Q3KP44 614 aa7.7□□□□□ -1.18
HERC1-212ENST00000561348 UNQ9165/PRO28630Q6UXU0 137 aa7.7□□□□□ -1.18
HERC1-212ENST00000561348 IL34Q6ZMJ4 242 aa7.7□□□□□ -1.18
HERC1-212ENST00000561348 GPHB5Q86YW7 130 aa7.7□□□□□ -1.18
HERC1-212ENST00000561348 UXS1Q8NBZ7 420 aa7.7□□□□□ -1.18
HERC1-212ENST00000561348 DUSP18Q8NEJ0 188 aa7.7□□□□□ -1.18
HERC1-212ENST00000561348 BSCL2Q96G97 398 aaPredicted RBP7.7□□□□□ -1.18
HERC1-212ENST00000561348 CHRDL1Q9BU40 450 aa7.7□□□□□ -1.18
HERC1-212ENST00000561348 PALMDQ9NP74 551 aa7.7□□□□□ -1.18
HERC1-212ENST00000561348 SHPKQ9UHJ6 478 aa7.7□□□□□ -1.18
HERC1-212ENST00000561348 SMAD5-AS1Q9Y6J3 95 aa7.7□□□□□ -1.18
HERC1-212ENST00000561348 LYRM1O43325 122 aa7.69□□□□□ -1.18
HERC1-212ENST00000561348 SCAF4O95104 1147 aaKnown RBP7.69□□□□□ -1.18
HERC1-212ENST00000561348 NDUFB6O95139 128 aa7.69□□□□□ -1.18
HERC1-212ENST00000561348 RNASE2P10153 161 aaKnown RBP7.69□□□□□ -1.18
HERC1-212ENST00000561348 IAPPP10997 89 aa7.69□□□□□ -1.18
HERC1-212ENST00000561348 CBLN1P23435 193 aa7.69□□□□□ -1.18
HERC1-212ENST00000561348 DCTN2Q13561 401 aaKnown RBP7.69□□□□□ -1.18
HERC1-212ENST00000561348 CD300EQ496F6 205 aaPredicted RBP7.69□□□□□ -1.18
HERC1-212ENST00000561348 LCN12Q6JVE5 192 aa7.69□□□□□ -1.18
HERC1-212ENST00000561348 GTSCR1Q86UQ5 136 aa7.69□□□□□ -1.18
HERC1-212ENST00000561348 DEDD2Q8WXF8 326 aa7.69□□□□□ -1.18
HERC1-212ENST00000561348 IL22RA2Q969J5 263 aa7.69□□□□□ -1.18
HERC1-212ENST00000561348 MAGT1Q9H0U3 335 aa7.69□□□□□ -1.18
HERC1-212ENST00000561348 RBKSQ9H477 322 aa7.69□□□□□ -1.18
HERC1-212ENST00000561348 UFC1Q9Y3C8 167 aa7.69□□□□□ -1.18
HERC1-212ENST00000561348 IGKV3-7A0A075B6H7 116 aa7.68□□□□□ -1.18
HERC1-212ENST00000561348 IGHV3OR16-13A0A075B7E8 117 aa7.68□□□□□ -1.18
HERC1-212ENST00000561348 IGHV3-74A0A0B4J1X5 117 aa7.68□□□□□ -1.18
HERC1-212ENST00000561348 C9orf170A2RU37 121 aa7.68□□□□□ -1.18
HERC1-212ENST00000561348 I3L2K1 104 aa7.68□□□□□ -1.18
HERC1-212ENST00000561348 IFNA4P05014 189 aa7.68□□□□□ -1.18
HERC1-212ENST00000561348 OR4E1P0C645 316 aa7.68□□□□□ -1.18
HERC1-212ENST00000561348 HTR2BP41595 481 aa7.68□□□□□ -1.18
HERC1-212ENST00000561348 NPBWR1P48145 328 aa7.68□□□□□ -1.18
HERC1-212ENST00000561348 UBE2MP61081 183 aaKnown RBP7.68□□□□□ -1.18
HERC1-212ENST00000561348 TNFRSF9Q07011 255 aa7.68□□□□□ -1.18
HERC1-212ENST00000561348 SPSB3Q6PJ21 355 aa7.68□□□□□ -1.18
HERC1-212ENST00000561348 BTNL8Q6UX41 500 aa7.68□□□□□ -1.18
HERC1-212ENST00000561348 ADAMTSL5Q6ZMM2 481 aa7.68□□□□□ -1.18
HERC1-212ENST00000561348 RBPMS2Q6ZRY4 209 aaKnown RBP7.68□□□□□ -1.18
HERC1-212ENST00000561348 ZNF114Q8NC26 417 aa7.68□□□□□ -1.18
HERC1-212ENST00000561348 SLC24A4Q8NFF2 622 aa7.68□□□□□ -1.18
HERC1-212ENST00000561348 OR52B4Q8NGK2 314 aa7.68□□□□□ -1.18
HERC1-212ENST00000561348 COQ8AQ8NI60 647 aa7.68□□□□□ -1.18
HERC1-212ENST00000561348 DTD1Q8TEA8 209 aa7.68□□□□□ -1.18
HERC1-212ENST00000561348 S100ZQ8WXG8 99 aa7.68□□□□□ -1.18
HERC1-212ENST00000561348 WDR89Q96FK6 387 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms