RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 PRSS8Q16651 343 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 SMIM21Q3B7S5 101 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 ALKBH6Q3KRA9 238 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 TMEM30BQ3MIR4 351 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 COX19Q49B96 90 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 DCAF10Q5QP82 559 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 SPATA46Q5T0L3 261 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 TPTE2P1Q5T6R2 138 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 FAM78BQ5VT40 261 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 SPINK14Q6IE38 97 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 BTNL3Q6UXE8 466 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 WDR82Q6UXN9 313 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 Q6ZR03 302 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 Q6ZT83 130 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 H2BFWTQ7Z2G1 175 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 C11orf53Q8IXP5 236 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 C1orf174Q8IYL3 243 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 GCSAMQ8N6F7 178 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 TMEM105Q8N8V8 129 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 ZNF709Q8N972 641 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 OR4B1Q8NGF8 309 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 OR52L2PQ8NGH6 319 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 OR13A1Q8NGR1 328 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 OR4S2Q8NH73 311 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 UBALD1Q8TB05 177 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 SLC25A40Q8TBP6 338 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 KLF14Q8TD94 323 aaPredicted RBP1.99□□□□□ -2.09
SPG11-223ENST00000560858 MRGPRDQ8TDS7 321 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 SFRP2Q96HF1 295 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 MGST2Q99735 147 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 SNHG12Q9BXW3 62 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 OR2J1Q9GZK6 312 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 CXXC4Q9H2H0 198 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 IFI27L2Q9H2X8 130 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 OR51B6Q9H340 312 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 OBP2BQ9NPH6 170 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 CBLN4Q9NTU7 201 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 TMEM14BQ9NUH8 114 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 TMEM106BQ9NUM4 274 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 IL36BQ9NZH7 164 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 DKK4Q9UBT3 224 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 SLC25A10Q9UBX3 287 aaPredicted RBP1.99□□□□□ -2.09
SPG11-223ENST00000560858 NAGKQ9UJ70 344 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 TCF19Q9Y242 345 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 YTHDF2Q9Y5A9 579 aaKnown RBP1.99□□□□□ -2.09
SPG11-223ENST00000560858 V9GYV3 84 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 CACNA1DQ01668 2161 aa1.99□□□□□ -2.09
SPG11-223ENST00000560858 AHCTF1Q8WYP5 2266 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 TNCP24821 2201 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 SZT2Q5T011 3432 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 IGKV1D-17A0A075B6S4 117 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 TRGV5A0A0B4J1U4 118 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 IGHV3-43A0A0B4J1X8 118 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 IGHV2OR16-5A0A0B4J2B6 119 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 A0A0U1RQK1 487 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 ZNF320A2RRD8 509 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 PSMB11A5LHX3 300 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 PGPEP1LA6NFU8 196 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 ZNF705GA8MUZ8 300 aaPredicted RBP1.98□□□□□ -2.09
SPG11-223ENST00000560858 INS-IGF2F8WCM5 200 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 KLRC4-KLRK1H3BQV0 150 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 M0QZK8 103 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 M0R143 59 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 TCAPO15273 167 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 NUPR1O60356 82 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 TNFSF13O75888 250 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 SERF1AO75920 110 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 NDUFB4O95168 129 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 MT-CO2P00403 227 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 PDGFBP01127 241 aaPredicted RBP1.98□□□□□ -2.09
SPG11-223ENST00000560858 IGLV2-8P01709 118 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 CRYAAP02489 173 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 REG1AP05451 166 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 LINC00614P0C842 121 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 CECR9P0C854 216 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 CFC1BP0CG36 223 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 CFC1P0CG37 223 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 CGB3P0DN86 165 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 CGB7P0DN87 165 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 IGHV3-43DP0DP04 118 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 CRISP2P16562 243 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 EGR1P18146 543 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 NPY1RP25929 384 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 GCH1P30793 250 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 OR10J1P30954 320 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 CTRLP40313 264 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 GPR12P47775 334 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 RAB7AP51149 207 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 EDDM3BP56851 147 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 TPPP2P59282 170 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 UBE2G2P60604 165 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 ERVK-16P61578 105 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 RHOBP62745 196 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 RANP62826 216 aaKnown RBP1.98□□□□□ -2.09
SPG11-223ENST00000560858 RPL31P62899 125 aaKnown RBP1.98□□□□□ -2.09
SPG11-223ENST00000560858 PAFAH1B2P68402 229 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 ARG2P78540 354 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 AESQ08117 197 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 MZT1Q08AG7 82 aa1.98□□□□□ -2.09
SPG11-223ENST00000560858 Q0VG73 95 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms