RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 C21orf62Q9NYP8 219 aa11.6□□□□□ -0.55
SNRPA1-213ENST00000560856 TGOLN2O43493 480 aa11.59□□□□□ -0.55
SNRPA1-213ENST00000560856 ADMP35318 185 aa11.59□□□□□ -0.55
SNRPA1-213ENST00000560856 INPP1P49441 399 aa11.59□□□□□ -0.55
SNRPA1-213ENST00000560856 PPP1R1AQ13522 171 aa11.59□□□□□ -0.55
SNRPA1-213ENST00000560856 CENPSQ8N2Z9 138 aa11.59□□□□□ -0.55
SNRPA1-213ENST00000560856 CHRDL1Q9BU40 450 aa11.59□□□□□ -0.55
SNRPA1-213ENST00000560856 ZC4H2Q9NQZ6 224 aa11.59□□□□□ -0.55
SNRPA1-213ENST00000560856 FLVCR2Q9UPI3 526 aa11.59□□□□□ -0.55
SNRPA1-213ENST00000560856 C2orf70A6NJV1 201 aa11.58□□□□□ -0.56
SNRPA1-213ENST00000560856 SFT2D2O95562 160 aa11.58□□□□□ -0.56
SNRPA1-213ENST00000560856 SULT1A3P0DMM9 295 aa11.58□□□□□ -0.56
SNRPA1-213ENST00000560856 SULT1A4P0DMN0 295 aa11.58□□□□□ -0.56
SNRPA1-213ENST00000560856 ANXA3P12429 323 aa11.58□□□□□ -0.56
SNRPA1-213ENST00000560856 FCGR2BP31994 310 aaPredicted RBP11.58□□□□□ -0.56
SNRPA1-213ENST00000560856 SRPXP78539 464 aa11.58□□□□□ -0.56
SNRPA1-213ENST00000560856 UNQ9165/PRO28630Q6UXU0 137 aa11.58□□□□□ -0.56
SNRPA1-213ENST00000560856 MISP3Q96FF7 219 aa11.58□□□□□ -0.56
SNRPA1-213ENST00000560856 PDCD10Q9BUL8 212 aa11.58□□□□□ -0.56
SNRPA1-213ENST00000560856 ZNF436Q9C0F3 470 aaPredicted RBP11.58□□□□□ -0.56
SNRPA1-213ENST00000560856 PEMTQ9UBM1 199 aa11.58□□□□□ -0.56
SNRPA1-213ENST00000560856 DUXBA0A1W2PPF3 345 aa11.57□□□□□ -0.56
SNRPA1-213ENST00000560856 TMEM213A2RRL7 107 aa11.57□□□□□ -0.56
SNRPA1-213ENST00000560856 OR2T8A6NH00 312 aa11.57□□□□□ -0.56
SNRPA1-213ENST00000560856 A8MWP6 167 aa11.57□□□□□ -0.56
SNRPA1-213ENST00000560856 PITX3O75364 302 aa11.57□□□□□ -0.56
SNRPA1-213ENST00000560856 MT-CO2P00403 227 aa11.57□□□□□ -0.56
SNRPA1-213ENST00000560856 CTSGP08311 255 aa11.57□□□□□ -0.56
SNRPA1-213ENST00000560856 GP9P14770 177 aa11.57□□□□□ -0.56
SNRPA1-213ENST00000560856 UBE2MP61081 183 aaKnown RBP11.57□□□□□ -0.56
SNRPA1-213ENST00000560856 FAM106AQ4KMX7 169 aa11.57□□□□□ -0.56
SNRPA1-213ENST00000560856 DEFB121Q5J5C9 76 aa11.57□□□□□ -0.56
SNRPA1-213ENST00000560856 C11orf87Q6NUJ2 197 aa11.57□□□□□ -0.56
SNRPA1-213ENST00000560856 PLET1Q6UQ28 207 aa11.57□□□□□ -0.56
SNRPA1-213ENST00000560856 BSCL2Q96G97 398 aaPredicted RBP11.57□□□□□ -0.56
SNRPA1-213ENST00000560856 CCDC32Q9BV29 185 aa11.57□□□□□ -0.56
SNRPA1-213ENST00000560856 PTTG2Q9NZH5 202 aa11.57□□□□□ -0.56
SNRPA1-213ENST00000560856 IGHV3-35A0A0C4DH35 117 aa11.56□□□□□ -0.56
SNRPA1-213ENST00000560856 IZUMO1RA6ND01 250 aa11.56□□□□□ -0.56
SNRPA1-213ENST00000560856 IGHV3-48P01763 117 aa11.56□□□□□ -0.56
SNRPA1-213ENST00000560856 FOLR2P14207 255 aa11.56□□□□□ -0.56
SNRPA1-213ENST00000560856 VAMP1P23763 118 aa11.56□□□□□ -0.56
SNRPA1-213ENST00000560856 SNCAP37840 140 aa11.56□□□□□ -0.56
SNRPA1-213ENST00000560856 HOXA1P49639 335 aaPredicted RBP11.56□□□□□ -0.56
SNRPA1-213ENST00000560856 SMCO1Q147U7 214 aa11.56□□□□□ -0.56
SNRPA1-213ENST00000560856 SPSB3Q6PJ21 355 aa11.56□□□□□ -0.56
SNRPA1-213ENST00000560856 TMEM170AQ8WVE7 144 aa11.56□□□□□ -0.56
SNRPA1-213ENST00000560856 FNDC4Q9H6D8 234 aaPredicted RBP11.56□□□□□ -0.56
SNRPA1-213ENST00000560856 HSPB7Q9UBY9 170 aa11.56□□□□□ -0.56
SNRPA1-213ENST00000560856 A0A1B0GU03 582 aa11.55□□□□□ -0.56
SNRPA1-213ENST00000560856 C9orf170A2RU37 121 aa11.55□□□□□ -0.56
SNRPA1-213ENST00000560856 CENPXA8MT69 81 aa11.55□□□□□ -0.56
SNRPA1-213ENST00000560856 LYRM1O43325 122 aa11.55□□□□□ -0.56
SNRPA1-213ENST00000560856 LY86O95711 162 aa11.55□□□□□ -0.56
SNRPA1-213ENST00000560856 C8orf88P0DMB2 117 aa11.55□□□□□ -0.56
SNRPA1-213ENST00000560856 CBLN1P23435 193 aa11.55□□□□□ -0.56
SNRPA1-213ENST00000560856 MFAP4P55083 255 aa11.55□□□□□ -0.56
SNRPA1-213ENST00000560856 TNFRSF9Q07011 255 aa11.55□□□□□ -0.56
SNRPA1-213ENST00000560856 MLANAQ16655 118 aa11.55□□□□□ -0.56
SNRPA1-213ENST00000560856 DEFB114Q30KQ6 69 aa11.55□□□□□ -0.56
SNRPA1-213ENST00000560856 TM4SF20Q53R12 229 aa11.55□□□□□ -0.56
SNRPA1-213ENST00000560856 Q8N1Y9 231 aa11.55□□□□□ -0.56
SNRPA1-213ENST00000560856 S100ZQ8WXG8 99 aa11.55□□□□□ -0.56
SNRPA1-213ENST00000560856 CACNG8Q8WXS5 425 aa11.55□□□□□ -0.56
SNRPA1-213ENST00000560856 TMEM190Q8WZ59 177 aa11.55□□□□□ -0.56
SNRPA1-213ENST00000560856 TXN2Q99757 166 aa11.55□□□□□ -0.56
SNRPA1-213ENST00000560856 ENY2Q9NPA8 101 aa11.55□□□□□ -0.56
SNRPA1-213ENST00000560856 BATF3Q9NR55 127 aa11.55□□□□□ -0.56
SNRPA1-213ENST00000560856 MRPL36Q9P0J6 103 aaKnown RBP11.55□□□□□ -0.56
SNRPA1-213ENST00000560856 ZNF320A2RRD8 509 aa11.54□□□□□ -0.56
SNRPA1-213ENST00000560856 NXPH3O95157 252 aa11.54□□□□□ -0.56
SNRPA1-213ENST00000560856 SLC25A6P12236 298 aa11.54□□□□□ -0.56
SNRPA1-213ENST00000560856 ANXA7P20073 488 aaKnown RBP11.54□□□□□ -0.56
SNRPA1-213ENST00000560856 SUB1P53999 127 aaKnown RBP eCLIP11.54□□□□□ -0.56
SNRPA1-213ENST00000560856 ELLP55199 621 aaPredicted RBP11.54□□□□□ -0.56
SNRPA1-213ENST00000560856 DHRS2Q13268 280 aa11.54□□□□□ -0.56
SNRPA1-213ENST00000560856 C2orf83Q53S99 150 aa11.54□□□□□ -0.56
SNRPA1-213ENST00000560856 Q56UQ5 140 aa11.54□□□□□ -0.56
SNRPA1-213ENST00000560856 UBAC2Q8NBM4 344 aa11.54□□□□□ -0.56
SNRPA1-213ENST00000560856 PINX1Q96BK5 328 aaKnown RBP11.54□□□□□ -0.56
SNRPA1-213ENST00000560856 HEYLQ9NQ87 328 aaPredicted RBP11.54□□□□□ -0.56
SNRPA1-213ENST00000560856 CACFD1Q9UGQ2 172 aa11.54□□□□□ -0.56
SNRPA1-213ENST00000560856 PIGBOS1A0A0B4J2F0 54 aa11.53□□□□□ -0.56
SNRPA1-213ENST00000560856 ZNF785A8K8V0 405 aa11.53□□□□□ -0.56
SNRPA1-213ENST00000560856 CEBPZOSA8MTT3 80 aa11.53□□□□□ -0.56
SNRPA1-213ENST00000560856 NDUFA4O00483 81 aa11.53□□□□□ -0.56
SNRPA1-213ENST00000560856 OR4E1P0C645 316 aa11.53□□□□□ -0.56
SNRPA1-213ENST00000560856 HTR2BP41595 481 aa11.53□□□□□ -0.56
SNRPA1-213ENST00000560856 CD300EQ496F6 205 aaPredicted RBP11.53□□□□□ -0.56
SNRPA1-213ENST00000560856 LYG2Q86SG7 212 aa11.53□□□□□ -0.56
SNRPA1-213ENST00000560856 UXS1Q8NBZ7 420 aa11.53□□□□□ -0.56
SNRPA1-213ENST00000560856 OR2K2Q8NGT1 345 aa11.53□□□□□ -0.56
SNRPA1-213ENST00000560856 B9D2Q9BPU9 175 aa11.53□□□□□ -0.56
SNRPA1-213ENST00000560856 RBKSQ9H477 322 aa11.53□□□□□ -0.56
SNRPA1-213ENST00000560856 GAR1Q9NY12 217 aaKnown RBP11.53□□□□□ -0.56
SNRPA1-213ENST00000560856 TBC1D24Q9ULP9 559 aa11.53□□□□□ -0.56
SNRPA1-213ENST00000560856 TMED3Q9Y3Q3 217 aa11.53□□□□□ -0.56
SNRPA1-213ENST00000560856 COL7A1Q02388 2944 aa11.53□□□□□ -0.56
SNRPA1-213ENST00000560856 CORTO00230 105 aa11.52□□□□□ -0.57
SNRPA1-213ENST00000560856 HOXB5P09067 269 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms