RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 AGMATQ9BSE5 352 aa7.38□□□□□ -1.23
TPM1-225ENST00000560679 NAA60Q9H7X0 242 aa7.38□□□□□ -1.23
TPM1-225ENST00000560679 Q9N2K0 584 aa7.38□□□□□ -1.23
TPM1-225ENST00000560679 KCNIP1Q9NZI2 227 aa7.38□□□□□ -1.23
TPM1-225ENST00000560679 MBD2Q9UBB5 411 aa7.38□□□□□ -1.23
TPM1-225ENST00000560679 TRBV6-7A0A0A0MS04 114 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 TEX13DA0A0J9YY54 714 aaPredicted RBP7.37□□□□□ -1.23
TPM1-225ENST00000560679 RNF222A6NCQ9 220 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 TRDCB7Z8K6 153 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 ADAP1O75689 374 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 IGLV2-23P01705 113 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 CRYGBP07316 175 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 CTXN2P0C2S0 81 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 APELAP0DMC3 54 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 MED14OSP0DP75 135 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 FOLR2P14207 255 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 BMI1P35226 326 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 KIR2DS2P43631 304 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 FXYD4P59646 89 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 MRGPRG-AS1Q2M3A8 158 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 DEFB135Q30KP9 77 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 LRRC37A5PQ49AS3 106 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 ACOT7LQ6ZUV0 252 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 MOB1BQ7L9L4 216 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 TMEM61Q8N0U2 210 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 CCDC71LQ8N9Z2 235 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 SCARB1Q8WTV0 552 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 IL1F10Q8WWZ1 152 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 GALMQ96C23 342 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 GALNT14Q96FL9 552 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 C2orf50Q96LR7 162 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 TSNAXQ99598 290 aaKnown RBP7.37□□□□□ -1.23
TPM1-225ENST00000560679 COA4Q9NYJ1 87 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 TP53TG1Q9Y2A0 90 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 DMRT1Q9Y5R6 373 aa7.37□□□□□ -1.23
TPM1-225ENST00000560679 KANTRA0A1W2PQU2 76 aa7.36□□□□□ -1.23
TPM1-225ENST00000560679 TUSC2O75896 110 aa7.36□□□□□ -1.23
TPM1-225ENST00000560679 DIRAS3O95661 229 aa7.36□□□□□ -1.23
TPM1-225ENST00000560679 PPYP01298 95 aa7.36□□□□□ -1.23
TPM1-225ENST00000560679 AP2S1P53680 142 aaPredicted RBP7.36□□□□□ -1.23
TPM1-225ENST00000560679 PIGPP57054 158 aa7.36□□□□□ -1.23
TPM1-225ENST00000560679 RPS16P62249 146 aaKnown RBP7.36□□□□□ -1.23
TPM1-225ENST00000560679 HLA-DRB3P79483 266 aa7.36□□□□□ -1.23
TPM1-225ENST00000560679 ZNF880Q6PDB4 577 aa7.36□□□□□ -1.23
TPM1-225ENST00000560679 PRSS54Q6PEW0 395 aa7.36□□□□□ -1.23
TPM1-225ENST00000560679 SLC16A13Q7RTY0 426 aa7.36□□□□□ -1.23
TPM1-225ENST00000560679 INO80EQ8NBZ0 244 aaPredicted RBP7.36□□□□□ -1.23
TPM1-225ENST00000560679 PRR13Q9NZ81 148 aa7.36□□□□□ -1.23
TPM1-225ENST00000560679 OR1A1Q9P1Q5 309 aa7.36□□□□□ -1.23
TPM1-225ENST00000560679 KCNIP3Q9Y2W7 256 aa7.36□□□□□ -1.23
TPM1-225ENST00000560679 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.35□□□□□ -1.23
TPM1-225ENST00000560679 PPP5D1E7EU14 171 aa7.35□□□□□ -1.23
TPM1-225ENST00000560679 SPRY2O43597 315 aa7.35□□□□□ -1.23
TPM1-225ENST00000560679 IFNA21P01568 189 aa7.35□□□□□ -1.23
TPM1-225ENST00000560679 PRH1P02810 166 aa7.35□□□□□ -1.23
TPM1-225ENST00000560679 HOXB5P09067 269 aa7.35□□□□□ -1.23
TPM1-225ENST00000560679 PET100P0DJ07 73 aa7.35□□□□□ -1.23
TPM1-225ENST00000560679 NUP62P37198 522 aaPredicted RBP7.35□□□□□ -1.23
TPM1-225ENST00000560679 LGALS7P47929 136 aa7.35□□□□□ -1.23
TPM1-225ENST00000560679 RND3P61587 244 aa7.35□□□□□ -1.23
TPM1-225ENST00000560679 RHOGP84095 191 aa7.35□□□□□ -1.23
TPM1-225ENST00000560679 IL15RAQ13261 267 aa7.35□□□□□ -1.23
TPM1-225ENST00000560679 TMEM187Q14656 261 aa7.35□□□□□ -1.23
TPM1-225ENST00000560679 IGSF11Q5DX21 431 aa7.35□□□□□ -1.23
TPM1-225ENST00000560679 Q6ZWC4 215 aa7.35□□□□□ -1.23
TPM1-225ENST00000560679 COMMD7Q86VX2 200 aa7.35□□□□□ -1.23
TPM1-225ENST00000560679 PDPNQ86YL7 162 aa7.35□□□□□ -1.23
TPM1-225ENST00000560679 LRTM2Q8N967 370 aa7.35□□□□□ -1.23
TPM1-225ENST00000560679 OR4A4PQ8NGN8 299 aa7.35□□□□□ -1.23
TPM1-225ENST00000560679 ST8SIA2Q92186 375 aa7.35□□□□□ -1.23
TPM1-225ENST00000560679 OR10C1Q96KK4 312 aa7.35□□□□□ -1.23
TPM1-225ENST00000560679 TMEM68Q96MH6 324 aa7.35□□□□□ -1.23
TPM1-225ENST00000560679 CABLES2Q9BTV7 478 aa7.35□□□□□ -1.23
TPM1-225ENST00000560679 SLC2A9Q9NRM0 540 aa7.35□□□□□ -1.23
TPM1-225ENST00000560679 TECRQ9NZ01 308 aaKnown RBP7.35□□□□□ -1.23
TPM1-225ENST00000560679 MLXQ9UH92 298 aa7.35□□□□□ -1.23
TPM1-225ENST00000560679 HERC1Q15751 4861 aa7.35□□□□□ -1.23
TPM1-225ENST00000560679 LRP1BQ9NZR2 4599 aa7.34□□□□□ -1.23
TPM1-225ENST00000560679 TRBV9A0A0B4J1U6 114 aa7.34□□□□□ -1.23
TPM1-225ENST00000560679 TMEM213A2RRL7 107 aa7.34□□□□□ -1.23
TPM1-225ENST00000560679 H0YIZ8 118 aa7.34□□□□□ -1.23
TPM1-225ENST00000560679 ITGB1BP1O14713 200 aa7.34□□□□□ -1.23
TPM1-225ENST00000560679 BET1O15155 118 aa7.34□□□□□ -1.23
TPM1-225ENST00000560679 OR5AC1P0C628 307 aa7.34□□□□□ -1.23
TPM1-225ENST00000560679 SRPXP78539 464 aa7.34□□□□□ -1.23
TPM1-225ENST00000560679 IAH1Q2TAA2 248 aaPredicted RBP7.34□□□□□ -1.23
TPM1-225ENST00000560679 PHLDA2Q53GA4 152 aa7.34□□□□□ -1.23
TPM1-225ENST00000560679 GGNBP1Q5YKI7 109 aa7.34□□□□□ -1.23
TPM1-225ENST00000560679 ALKAL2Q6UX46 152 aa7.34□□□□□ -1.23
TPM1-225ENST00000560679 LGI3Q8N145 548 aa7.34□□□□□ -1.23
TPM1-225ENST00000560679 ARPC5LQ9BPX5 153 aa7.34□□□□□ -1.23
TPM1-225ENST00000560679 RNF126Q9BV68 326 aa7.34□□□□□ -1.23
TPM1-225ENST00000560679 MED9Q9NWA0 146 aa7.34□□□□□ -1.23
TPM1-225ENST00000560679 IGKV1-6A0A0C4DH72 117 aa7.33□□□□□ -1.24
TPM1-225ENST00000560679 FAM223BA6NKX1 122 aa7.33□□□□□ -1.24
TPM1-225ENST00000560679 SRRM4A7MD48 611 aaKnown RBP7.33□□□□□ -1.24
TPM1-225ENST00000560679 MPTX1A8MV57 137 aa7.33□□□□□ -1.24
TPM1-225ENST00000560679 LGALS9O00182 355 aa7.33□□□□□ -1.24
TPM1-225ENST00000560679 GPR31O00270 319 aa7.33□□□□□ -1.24
TPM1-225ENST00000560679 SCAF4O95104 1147 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms